| Accession number | Name | Occurrences in all snw genes | Occurrences in all int/reg genes |
|---|---|---|---|
| GO:0005654 | nucleoplasm | 64 | 1082 |
| Gene Symbol | Entrez Gene ID | Frequency | chia-screen-data-Fav gene score | Best subnetwork score | Degree | Chia-Hits Primary | Chia-Hits Secondary |
|---|---|---|---|---|---|---|---|
| POU5F1 | 5460 | 133 | -5.148 | 3.538 | 179 | Yes | Yes |
| YAP1 | 10413 | 94 | -4.256 | 3.538 | 53 | Yes | - |
| HNRNPU | 3192 | 76 | -2.869 | 3.538 | 139 | Yes | - |
| SRSF3 | 6428 | 73 | -2.992 | 3.538 | 54 | Yes | - |
| DDIT3 | 1649 | 60 | -2.825 | 3.504 | 343 | Yes | Yes |
| PSMD2 | 5708 | 47 | -4.172 | 3.157 | 386 | Yes | Yes |
| HCFC1 | 3054 | 40 | -2.925 | 3.449 | 71 | Yes | Yes |
| EP300 | 2033 | 22 | -2.274 | 3.120 | 415 | Yes | Yes |
| TPR | 7175 | 18 | -2.638 | 3.072 | 28 | Yes | Yes |
| PHB | 5245 | 15 | -2.743 | 3.004 | 127 | Yes | Yes |
| MED12 | 9968 | 14 | -2.465 | 3.206 | 65 | Yes | - |
| MCRS1 | 10445 | 14 | -2.660 | 3.079 | 63 | Yes | Yes |
| NXF1 | 10482 | 10 | -2.426 | 3.538 | 65 | Yes | Yes |
| NFKB1 | 4790 | 9 | -2.123 | 2.870 | 263 | Yes | - |
| SYNCRIP | 10492 | 9 | -2.401 | 3.197 | 103 | Yes | Yes |
| SUMO1 | 7341 | 7 | -1.696 | 3.050 | 439 | - | - |
| MED14 | 9282 | 6 | -2.420 | 3.137 | 49 | Yes | - |
| MED24 | 9862 | 6 | -2.482 | 3.033 | 39 | Yes | - |
| NCBP1 | 4686 | 6 | -2.510 | 3.149 | 40 | Yes | Yes |
| HNRNPD | 3184 | 5 | -2.153 | 3.117 | 123 | Yes | - |
| MAPK14 | 1432 | 4 | -1.902 | 2.955 | 272 | - | - |
| SF3A1 | 10291 | 4 | -2.787 | 3.129 | 43 | Yes | Yes |
| POLR2E | 5434 | 4 | -2.037 | 3.157 | 115 | Yes | - |
| POLR2D | 5433 | 3 | -1.998 | 3.216 | 36 | - | - |
| XRCC1 | 7515 | 3 | -2.092 | 3.043 | 34 | Yes | Yes |
| HDAC1 | 3065 | 2 | -1.712 | 2.869 | 566 | - | - |
| MED17 | 9440 | 2 | -2.161 | 2.860 | 51 | Yes | - |
| CDKN2A | 1029 | 2 | -1.774 | 2.959 | 126 | - | - |
| SUZ12 | 23512 | 2 | -1.792 | 2.904 | 42 | - | - |
| POLR2L | 5441 | 2 | -1.972 | 3.159 | 63 | - | - |
| WWTR1 | 25937 | 2 | -1.886 | 3.171 | 40 | - | - |
| FUS | 2521 | 2 | -1.980 | 3.004 | 136 | - | - |
| EZH2 | 2146 | 2 | -1.631 | 2.904 | 105 | - | - |
| MED7 | 9443 | 2 | -1.913 | 3.137 | 37 | - | - |
| MED4 | 29079 | 2 | -1.785 | 2.860 | 44 | - | - |
| KAT8 | 84148 | 2 | -1.931 | 3.072 | 29 | - | - |
| CCNO | 10309 | 1 | -1.753 | 2.866 | 6 | - | - |
| HIST2H2BE | 8349 | 1 | -1.600 | 2.856 | 98 | - | - |
| TEAD4 | 7004 | 1 | -1.693 | 3.171 | 14 | - | - |
| POLR2H | 5437 | 1 | -1.960 | 2.789 | 41 | - | - |
| TFDP2 | 7029 | 1 | -2.150 | 2.826 | 13 | Yes | - |
| PSIP1 | 11168 | 1 | -1.537 | 2.880 | 17 | - | - |
| SQSTM1 | 8878 | 1 | -1.719 | 2.797 | 488 | - | - |
| E4F1 | 1877 | 1 | -2.370 | 2.959 | 27 | Yes | Yes |
| AHCTF1 | 25909 | 1 | -2.069 | 2.974 | 9 | Yes | - |
| SP100 | 6672 | 1 | -1.840 | 2.863 | 21 | - | - |
| SFPQ | 6421 | 1 | -2.051 | 3.193 | 111 | Yes | - |
| CDC23 | 8697 | 1 | -1.829 | 2.971 | 74 | - | - |
| ATF6 | 22926 | 1 | -1.377 | 2.845 | 26 | - | - |
| PRPF8 | 10594 | 1 | -1.894 | 2.824 | 130 | - | - |
| SF3A3 | 10946 | 1 | -2.071 | 2.870 | 40 | Yes | Yes |
| WDR5 | 11091 | 1 | -0.661 | 2.884 | 173 | - | - |
| KANSL2 | 54934 | 1 | -1.149 | 2.863 | 3 | - | - |
| MYO6 | 4646 | 1 | -2.037 | 2.837 | 34 | Yes | - |
| HNRNPM | 4670 | 1 | -1.884 | 2.857 | 117 | - | - |
| CCNC | 892 | 1 | -1.726 | 2.968 | 101 | - | - |
| SAE1 | 10055 | 1 | -1.619 | 2.863 | 48 | - | - |
| CARM1 | 10498 | 1 | -1.583 | 2.806 | 68 | - | - |
| IRF9 | 10379 | 1 | -1.789 | 2.844 | 32 | - | - |
| ESR1 | 2099 | 1 | 2.117 | 2.898 | 608 | - | - |
| E2F5 | 1875 | 1 | -1.381 | 2.826 | 13 | - | - |
| ANKRD1 | 27063 | 1 | -2.448 | 2.853 | 15 | Yes | Yes |
| TAF12 | 6883 | 1 | -2.134 | 2.829 | 35 | Yes | - |
| RBPJ | 3516 | 1 | -1.698 | 2.829 | 48 | - | - |
| Subnetwork ID | chia-screen-data-Fav score | Size | Highlighted genes | Hypergeometric test | Corrected p-value | Enrichment ratio | Occurrences in subnetwork |
|---|---|---|---|---|---|---|---|
| int-snw-54857 | 2.797 | 13 | 11 | 1.51e-05 | 2.17e-01 | 2.844 | 7 |
| int-snw-9097 | 2.974 | 8 | 6 | 1.77e-02 | 1.00e+00 | 2.322 | 3 |
| int-snw-2146 | 2.904 | 8 | 6 | 1.73e-03 | 1.00e+00 | 2.737 | 4 |
| int-snw-4653 | 2.922 | 11 | 10 | 7.42e-04 | 1.00e+00 | 2.599 | 5 |
| int-snw-9086 | 2.957 | 14 | 13 | 2.66e-03 | 1.00e+00 | 2.251 | 5 |
| int-snw-29915 | 2.853 | 9 | 7 | 2.51e-02 | 1.00e+00 | 2.152 | 3 |
| int-snw-23530 | 2.970 | 7 | 6 | 9.17e-02 | 1.00e+00 | 1.929 | 2 |
| int-snw-5434 | 3.157 | 12 | 12 | 7.43e-06 | 1.07e-01 | 2.959 | 7 |
| int-snw-3162 | 2.821 | 11 | 9 | 6.78e-03 | 1.00e+00 | 2.277 | 4 |
| int-snw-6850 | 3.067 | 9 | 8 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-4035 | 2.799 | 7 | 5 | 9.17e-02 | 1.00e+00 | 1.929 | 2 |
| int-snw-54985 | 2.815 | 9 | 7 | 2.92e-03 | 1.00e+00 | 2.567 | 4 |
| int-snw-9650 | 2.847 | 13 | 12 | 1.90e-04 | 1.00e+00 | 2.621 | 6 |
| int-snw-51429 | 2.870 | 17 | 16 | 1.29e-05 | 1.86e-01 | 2.649 | 8 |
| int-snw-2033 | 3.120 | 8 | 8 | 1.09e-04 | 1.00e+00 | 3.059 | 5 |
| int-snw-9706 | 3.197 | 7 | 7 | 4.35e-05 | 6.28e-01 | 3.251 | 5 |
| int-snw-871 | 2.818 | 11 | 9 | 6.78e-03 | 1.00e+00 | 2.277 | 4 |
| int-snw-25909 | 2.974 | 9 | 9 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-50618 | 3.079 | 9 | 9 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-1875 | 2.826 | 12 | 11 | 7.43e-06 | 1.07e-01 | 2.959 | 7 |
| int-snw-7775 | 2.988 | 10 | 9 | 2.84e-05 | 4.09e-01 | 3.000 | 6 |
| int-snw-1114 | 2.789 | 18 | 13 | 1.36e-07 | 1.96e-03 | 2.889 | 10 |
| int-snw-54458 | 2.901 | 9 | 5 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-54934 | 2.863 | 14 | 13 | 2.82e-05 | 4.06e-01 | 2.737 | 7 |
| int-snw-4722 | 2.797 | 11 | 9 | 1.32e-07 | 1.90e-03 | 3.277 | 8 |
| int-snw-5514 | 2.901 | 10 | 9 | 4.31e-04 | 1.00e+00 | 2.737 | 5 |
| int-snw-90019 | 2.833 | 12 | 11 | 1.30e-08 | 1.88e-04 | 3.322 | 9 |
| int-snw-4145 | 2.866 | 7 | 6 | 1.17e-02 | 1.00e+00 | 2.514 | 3 |
| int-snw-116113 | 2.873 | 8 | 6 | 1.09e-04 | 1.00e+00 | 3.059 | 5 |
| int-snw-10309 | 2.866 | 5 | 4 | 3.75e-03 | 1.00e+00 | 3.000 | 3 |
| int-snw-1496 | 2.804 | 12 | 10 | 9.57e-03 | 1.00e+00 | 2.152 | 4 |
| int-snw-4216 | 2.976 | 9 | 8 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-54993 | 2.834 | 11 | 8 | 5.85e-05 | 8.43e-01 | 2.862 | 6 |
| int-snw-663 | 2.989 | 9 | 8 | 1.21e-05 | 1.75e-01 | 3.152 | 6 |
| int-snw-8241 | 3.129 | 5 | 5 | 3.75e-03 | 1.00e+00 | 3.000 | 3 |
| int-snw-892 | 2.968 | 17 | 15 | 1.29e-05 | 1.86e-01 | 2.649 | 8 |
| int-snw-58 | 3.062 | 7 | 7 | 9.17e-04 | 1.00e+00 | 2.929 | 4 |
| int-snw-6733 | 3.104 | 7 | 5 | 1.17e-02 | 1.00e+00 | 2.514 | 3 |
| int-snw-29079 | 2.860 | 15 | 13 | 3.91e-06 | 5.63e-02 | 2.830 | 8 |
| int-snw-10474 | 3.082 | 8 | 7 | 1.09e-04 | 1.00e+00 | 3.059 | 5 |
| int-snw-9221 | 3.033 | 8 | 7 | 1.73e-03 | 1.00e+00 | 2.737 | 4 |
| int-snw-11033 | 2.870 | 11 | 10 | 3.31e-06 | 4.77e-02 | 3.085 | 7 |
| int-snw-3184 | 3.117 | 8 | 8 | 9.82e-08 | 1.42e-03 | 3.544 | 7 |
| int-snw-7812 | 2.847 | 10 | 9 | 2.84e-05 | 4.09e-01 | 3.000 | 6 |
| int-snw-4790 | 2.860 | 14 | 14 | 3.12e-04 | 1.00e+00 | 2.514 | 6 |
| int-snw-10980 | 2.797 | 12 | 8 | 9.57e-03 | 1.00e+00 | 2.152 | 4 |
| int-snw-4676 | 3.119 | 9 | 8 | 1.21e-05 | 1.75e-01 | 3.152 | 6 |
| int-snw-5441 | 3.159 | 9 | 8 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-6663 | 3.050 | 6 | 4 | 7.09e-03 | 1.00e+00 | 2.737 | 3 |
| int-snw-79661 | 2.817 | 7 | 6 | 9.17e-04 | 1.00e+00 | 2.929 | 4 |
| int-snw-5905 | 2.933 | 14 | 10 | 1.03e-07 | 1.49e-03 | 3.099 | 9 |
| int-snw-219541 | 3.449 | 5 | 5 | 3.75e-03 | 1.00e+00 | 3.000 | 3 |
| int-snw-2099 | 2.898 | 10 | 9 | 1.29e-06 | 1.86e-02 | 3.222 | 7 |
| int-snw-10055 | 2.863 | 11 | 8 | 3.49e-09 | 5.04e-05 | 3.447 | 9 |
| int-snw-1487 | 2.813 | 11 | 9 | 7.42e-04 | 1.00e+00 | 2.599 | 5 |
| int-snw-1029 | 2.959 | 11 | 10 | 5.85e-05 | 8.43e-01 | 2.862 | 6 |
| int-snw-122622 | 2.870 | 16 | 12 | 8.21e-05 | 1.00e+00 | 2.544 | 7 |
| int-snw-6789 | 3.110 | 10 | 10 | 1.29e-06 | 1.86e-02 | 3.222 | 7 |
| int-snw-57459 | 2.856 | 13 | 10 | 3.95e-08 | 5.70e-04 | 3.206 | 9 |
| int-snw-4435 | 2.867 | 15 | 14 | 4.94e-05 | 7.12e-01 | 2.637 | 7 |
| int-snw-221241 | 2.928 | 16 | 14 | 8.21e-05 | 1.00e+00 | 2.544 | 7 |
| int-snw-4286 | 2.805 | 14 | 10 | 1.03e-07 | 1.49e-03 | 3.099 | 9 |
| int-snw-57180 | 2.958 | 10 | 7 | 4.31e-04 | 1.00e+00 | 2.737 | 5 |
| int-snw-463 | 3.108 | 9 | 7 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-10379 | 2.844 | 13 | 12 | 1.82e-03 | 1.00e+00 | 2.358 | 5 |
| int-snw-1292 | 2.925 | 6 | 5 | 6.89e-02 | 1.00e+00 | 2.152 | 2 |
| int-snw-79602 | 2.811 | 13 | 9 | 1.30e-02 | 1.00e+00 | 2.036 | 4 |
| int-snw-7621 | 2.905 | 5 | 4 | 3.23e-01 | 1.00e+00 | 1.415 | 1 |
| int-snw-4670 | 2.857 | 18 | 17 | 2.17e-05 | 3.12e-01 | 2.567 | 8 |
| int-snw-154796 | 2.924 | 7 | 5 | 4.35e-05 | 6.28e-01 | 3.251 | 5 |
| int-snw-3883 | 2.804 | 15 | 12 | 4.94e-05 | 7.12e-01 | 2.637 | 7 |
| int-snw-54514 | 2.806 | 18 | 16 | 1.36e-07 | 1.96e-03 | 2.889 | 10 |
| int-snw-2521 | 3.004 | 10 | 9 | 3.84e-08 | 5.54e-04 | 3.415 | 8 |
| int-snw-9094 | 2.908 | 5 | 4 | 3.23e-01 | 1.00e+00 | 1.415 | 1 |
| int-snw-5073 | 2.938 | 9 | 8 | 4.13e-07 | 5.96e-03 | 3.374 | 7 |
| int-snw-4927 | 2.843 | 15 | 13 | 1.15e-08 | 1.66e-04 | 3.152 | 10 |
| int-snw-1601 | 2.837 | 12 | 10 | 1.19e-03 | 1.00e+00 | 2.474 | 5 |
| int-snw-9169 | 2.923 | 13 | 12 | 1.82e-03 | 1.00e+00 | 2.358 | 5 |
| int-snw-1432 | 2.955 | 13 | 12 | 1.90e-04 | 1.00e+00 | 2.621 | 6 |
| int-snw-51366 | 3.078 | 9 | 9 | 2.92e-03 | 1.00e+00 | 2.567 | 4 |
| int-snw-11171 | 2.838 | 13 | 12 | 8.95e-07 | 1.29e-02 | 3.036 | 8 |
| int-snw-22898 | 2.935 | 6 | 5 | 4.18e-04 | 1.00e+00 | 3.152 | 4 |
| int-snw-9443 | 3.137 | 9 | 8 | 1.21e-05 | 1.75e-01 | 3.152 | 6 |
| int-snw-6688 | 2.870 | 9 | 9 | 1.42e-01 | 1.00e+00 | 1.567 | 2 |
| int-snw-124944 | 2.884 | 11 | 9 | 1.32e-07 | 1.90e-03 | 3.277 | 8 |
| int-snw-2147 | 2.904 | 8 | 5 | 1.73e-03 | 1.00e+00 | 2.737 | 4 |
| int-snw-6879 | 2.899 | 8 | 8 | 1.16e-01 | 1.00e+00 | 1.737 | 2 |
| int-snw-3895 | 2.825 | 17 | 15 | 1.31e-04 | 1.00e+00 | 2.456 | 7 |
| int-snw-4214 | 2.975 | 8 | 8 | 1.77e-02 | 1.00e+00 | 2.322 | 3 |
| int-snw-2483 | 2.912 | 9 | 7 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-121536 | 2.821 | 14 | 10 | 1.95e-06 | 2.81e-02 | 2.929 | 8 |
| int-snw-8697 | 2.971 | 12 | 11 | 3.69e-07 | 5.32e-03 | 3.152 | 8 |
| int-snw-9968 | 3.206 | 7 | 7 | 9.17e-04 | 1.00e+00 | 2.929 | 4 |
| int-snw-6280 | 2.913 | 15 | 14 | 4.94e-05 | 7.12e-01 | 2.637 | 7 |
| int-snw-4901 | 2.857 | 13 | 11 | 6.83e-02 | 1.00e+00 | 1.621 | 3 |
| int-snw-8971 | 3.504 | 5 | 5 | 1.48e-04 | 1.00e+00 | 3.415 | 4 |
| int-snw-3516 | 2.829 | 5 | 4 | 3.75e-03 | 1.00e+00 | 3.000 | 3 |
| int-snw-7342 | 2.945 | 8 | 6 | 1.09e-04 | 1.00e+00 | 3.059 | 5 |
| int-snw-10482 | 3.538 | 5 | 5 | 2.36e-06 | 3.40e-02 | 3.737 | 5 |
| int-snw-55161 | 2.994 | 10 | 8 | 2.84e-05 | 4.09e-01 | 3.000 | 6 |
| int-snw-785 | 2.861 | 10 | 9 | 4.58e-03 | 1.00e+00 | 2.415 | 4 |
| int-snw-11168 | 2.880 | 15 | 13 | 3.91e-06 | 5.63e-02 | 2.830 | 8 |
| int-snw-6421 | 3.193 | 8 | 8 | 4.32e-06 | 6.23e-02 | 3.322 | 6 |
| int-snw-29107 | 3.066 | 8 | 7 | 9.82e-08 | 1.42e-03 | 3.544 | 7 |
| int-snw-55775 | 3.043 | 6 | 5 | 6.89e-02 | 1.00e+00 | 2.152 | 2 |
| int-snw-51807 | 3.103 | 8 | 7 | 1.73e-03 | 1.00e+00 | 2.737 | 4 |
| int-snw-22926 | 2.845 | 13 | 11 | 1.90e-04 | 1.00e+00 | 2.621 | 6 |
| int-snw-2549 | 2.911 | 6 | 5 | 6.89e-02 | 1.00e+00 | 2.152 | 2 |
| int-snw-55742 | 2.845 | 8 | 7 | 1.77e-02 | 1.00e+00 | 2.322 | 3 |
| int-snw-6905 | 2.836 | 11 | 7 | 7.42e-04 | 1.00e+00 | 2.599 | 5 |
| int-snw-1996 | 3.149 | 7 | 6 | 1.15e-06 | 1.66e-02 | 3.514 | 6 |
| int-snw-1471 | 2.933 | 9 | 8 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-1628 | 2.949 | 12 | 11 | 1.10e-04 | 1.00e+00 | 2.737 | 6 |
| int-snw-4678 | 2.951 | 9 | 8 | 2.30e-04 | 1.00e+00 | 2.889 | 5 |
| int-snw-84148 | 3.072 | 6 | 5 | 1.33e-05 | 1.91e-01 | 3.474 | 5 |
| int-snw-4825 | 2.847 | 13 | 12 | 1.51e-05 | 2.17e-01 | 2.844 | 7 |
| int-snw-7004 | 3.171 | 5 | 3 | 2.36e-06 | 3.40e-02 | 3.737 | 5 |
| int-snw-10594 | 2.824 | 13 | 12 | 1.90e-04 | 1.00e+00 | 2.621 | 6 |
| int-snw-6334 | 2.813 | 16 | 14 | 8.21e-05 | 1.00e+00 | 2.544 | 7 |
| int-snw-51450 | 2.944 | 11 | 8 | 5.85e-05 | 8.43e-01 | 2.862 | 6 |
| int-snw-79913 | 2.996 | 9 | 8 | 1.42e-01 | 1.00e+00 | 1.567 | 2 |
| int-snw-83440 | 2.861 | 14 | 12 | 3.12e-04 | 1.00e+00 | 2.514 | 6 |
| int-snw-50807 | 2.850 | 14 | 14 | 2.66e-03 | 1.00e+00 | 2.251 | 5 |
| int-snw-3476 | 2.924 | 13 | 12 | 1.90e-04 | 1.00e+00 | 2.621 | 6 |
| int-snw-6102 | 2.830 | 20 | 19 | 5.73e-06 | 8.27e-02 | 2.585 | 9 |
| int-snw-7727 | 2.937 | 11 | 9 | 5.85e-05 | 8.43e-01 | 2.862 | 6 |
| int-snw-5433 | 3.216 | 10 | 9 | 4.31e-04 | 1.00e+00 | 2.737 | 5 |
| int-snw-5033 | 2.877 | 11 | 8 | 3.31e-06 | 4.77e-02 | 3.085 | 7 |
| int-snw-6299 | 2.869 | 15 | 12 | 3.91e-06 | 5.63e-02 | 2.830 | 8 |
| int-snw-79711 | 2.842 | 14 | 11 | 8.23e-02 | 1.00e+00 | 1.514 | 3 |
| int-snw-4076 | 3.014 | 10 | 9 | 2.84e-05 | 4.09e-01 | 3.000 | 6 |
| int-snw-640 | 2.915 | 12 | 9 | 1.10e-04 | 1.00e+00 | 2.737 | 6 |
| int-snw-23559 | 2.840 | 10 | 8 | 4.31e-04 | 1.00e+00 | 2.737 | 5 |
| int-snw-89870 | 2.862 | 13 | 11 | 1.51e-05 | 2.17e-01 | 2.844 | 7 |