| GO:0034641 | cellular nitrogen compound metabolic process | 2 | 171 |
| GO:0030234 | enzyme regulator activity | 2 | 13 |
| GO:0016020 | membrane | 46 | 1681 |
| GO:0005515 | protein binding | 198 | 6024 |
| GO:0016071 | mRNA metabolic process | 8 | 223 |
| GO:0044281 | small molecule metabolic process | 20 | 1211 |
| GO:0000278 | mitotic cell cycle | 15 | 391 |
| GO:0051436 | negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | 2 | 65 |
| GO:0042981 | regulation of apoptotic process | 4 | 150 |
| GO:0016032 | viral process | 26 | 534 |
| GO:0002479 | antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent | 1 | 72 |
| GO:0005829 | cytosol | 86 | 2496 |
| GO:0000502 | proteasome complex | 3 | 58 |
| GO:0043066 | negative regulation of apoptotic process | 16 | 424 |
| GO:0051439 | regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | 2 | 74 |
| GO:0051437 | positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | 2 | 70 |
| GO:0042590 | antigen processing and presentation of exogenous peptide antigen via MHC class I | 1 | 75 |
| GO:0005838 | proteasome regulatory particle | 1 | 12 |
| GO:0070062 | extracellular vesicular exosome | 57 | 2400 |
| GO:0042176 | regulation of protein catabolic process | 2 | 16 |
| GO:0002474 | antigen processing and presentation of peptide antigen via MHC class I | 1 | 92 |
| GO:0006915 | apoptotic process | 12 | 555 |
| GO:0016070 | RNA metabolic process | 8 | 247 |
| GO:0006977 | DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest | 1 | 64 |
| GO:0010467 | gene expression | 45 | 669 |
| GO:0022624 | proteasome accessory complex | 1 | 17 |
| GO:0005654 | nucleoplasm | 64 | 1082 |
| GO:0000209 | protein polyubiquitination | 3 | 116 |
| GO:0000082 | G1/S transition of mitotic cell cycle | 3 | 149 |
| GO:0031145 | anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | 2 | 79 |
| GO:0006521 | regulation of cellular amino acid metabolic process | 1 | 50 |