| GO:0002224 | toll-like receptor signaling pathway | 4 | 109 |
| GO:0048011 | neurotrophin TRK receptor signaling pathway | 7 | 269 |
| GO:0005515 | protein binding | 198 | 6024 |
| GO:0005737 | cytoplasm | 124 | 3767 |
| GO:0050728 | negative regulation of inflammatory response | 3 | 56 |
| GO:0033256 | I-kappaB/NF-kappaB complex | 1 | 3 |
| GO:0005829 | cytosol | 86 | 2496 |
| GO:2000630 | positive regulation of miRNA metabolic process | 1 | 4 |
| GO:0071316 | cellular response to nicotine | 1 | 8 |
| GO:0034166 | toll-like receptor 10 signaling pathway | 4 | 65 |
| GO:0046688 | response to copper ion | 1 | 13 |
| GO:0043066 | negative regulation of apoptotic process | 16 | 424 |
| GO:0034142 | toll-like receptor 4 signaling pathway | 4 | 96 |
| GO:0010957 | negative regulation of vitamin D biosynthetic process | 1 | 4 |
| GO:0002755 | MyD88-dependent toll-like receptor signaling pathway | 5 | 80 |
| GO:0032481 | positive regulation of type I interferon production | 6 | 61 |
| GO:0032269 | negative regulation of cellular protein metabolic process | 1 | 4 |
| GO:0051092 | positive regulation of NF-kappaB transcription factor activity | 5 | 124 |
| GO:0003690 | double-stranded DNA binding | 3 | 86 |
| GO:0005739 | mitochondrion | 23 | 998 |
| GO:0038124 | toll-like receptor TLR6:TLR2 signaling pathway | 4 | 71 |
| GO:0071260 | cellular response to mechanical stimulus | 4 | 65 |
| GO:0005730 | nucleolus | 66 | 1641 |
| GO:0042803 | protein homodimerization activity | 19 | 595 |
| GO:0034146 | toll-like receptor 5 signaling pathway | 4 | 65 |
| GO:0034134 | toll-like receptor 2 signaling pathway | 4 | 73 |
| GO:0005654 | nucleoplasm | 64 | 1082 |
| GO:0045893 | positive regulation of transcription, DNA-templated | 24 | 478 |
| GO:0038095 | Fc-epsilon receptor signaling pathway | 5 | 168 |
| GO:0031072 | heat shock protein binding | 2 | 33 |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | 3 | 26 |
| GO:0045083 | negative regulation of interleukin-12 biosynthetic process | 1 | 1 |
| GO:0034162 | toll-like receptor 9 signaling pathway | 4 | 72 |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | 39 | 699 |
| GO:0045087 | innate immune response | 15 | 596 |
| GO:0071347 | cellular response to interleukin-1 | 2 | 31 |
| GO:0050852 | T cell receptor signaling pathway | 2 | 85 |
| GO:0038123 | toll-like receptor TLR1:TLR2 signaling pathway | 4 | 71 |
| GO:0035666 | TRIF-dependent toll-like receptor signaling pathway | 3 | 76 |
| GO:0034138 | toll-like receptor 3 signaling pathway | 3 | 79 |
| GO:1900127 | positive regulation of hyaluronan biosynthetic process | 1 | 3 |
| GO:0031293 | membrane protein intracellular domain proteolysis | 1 | 14 |
| GO:0071354 | cellular response to interleukin-6 | 2 | 7 |
| GO:0000975 | regulatory region DNA binding | 2 | 9 |
| GO:0032375 | negative regulation of cholesterol transport | 1 | 4 |
| GO:0044212 | transcription regulatory region DNA binding | 17 | 168 |
| GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 41 | 789 |
| GO:0090263 | positive regulation of canonical Wnt signaling pathway | 3 | 48 |
| GO:0006915 | apoptotic process | 12 | 555 |
| GO:0005634 | nucleus | 159 | 4559 |
| GO:0010744 | positive regulation of macrophage derived foam cell differentiation | 1 | 14 |
| GO:0000122 | negative regulation of transcription from RNA polymerase II promoter | 37 | 570 |
| GO:0006979 | response to oxidative stress | 6 | 87 |
| GO:0002756 | MyD88-independent toll-like receptor signaling pathway | 3 | 78 |
| GO:0071222 | cellular response to lipopolysaccharide | 4 | 81 |
| GO:0010956 | negative regulation of calcidiol 1-monooxygenase activity | 1 | 3 |
| GO:0071375 | cellular response to peptide hormone stimulus | 2 | 14 |
| GO:0006366 | transcription from RNA polymerase II promoter | 30 | 419 |
| GO:0010884 | positive regulation of lipid storage | 1 | 5 |
| GO:0006954 | inflammatory response | 6 | 277 |
| GO:0008134 | transcription factor binding | 18 | 242 |