GO:0000122

negative regulation of transcription from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0000122negative regulation of transcription from RNA polymerase II promoter37570

Term information on AmiGO 2: GO:0000122

Genes (37)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Chia-Hits Primary Chia-Hits Secondary
HCFC1 3054 40-2.9253.44971YesYes
YY1 7528 24-2.5723.120114YesYes
EP300 2033 22-2.2743.120415YesYes
TPR 7175 18-2.6383.07228YesYes
PHB 5245 15-2.7433.004127YesYes
ZFP36 7538 10-2.9682.86924YesYes
NFKB1 4790 9-2.1232.870263Yes-
CDX2 1045 3-2.0372.95533YesYes
TAF7 6879 3-2.1762.89938YesYes
HDAC1 3065 2-1.7122.869566--
SUZ12 23512 2-1.7922.90442--
SPI1 6688 2-2.0032.870115YesYes
WWTR1 25937 2-1.8863.17140--
EZH2 2146 2-1.6312.904105--
RBM10 8241 2-2.3293.12940Yes-
CTBP1 1487 2-1.6782.81895--
BCL6B 255877 2-2.7232.8693YesYes
TGFB1 7040 2-1.9972.82160--
COPS2 9318 2-2.5313.04346Yes-
CNOT1 23019 1-2.3472.96890Yes-
ZFHX3 463 1-1.2963.1088--
JUP 3728 1-1.3702.804104--
E4F1 1877 1-2.3702.95927YesYes
SP100 6672 1-1.8402.86321--
SFPQ 6421 1-2.0513.193111Yes-
IGBP1 3476 1-1.7082.92434--
MITF 4286 1-1.4582.80530--
HCFC2 29915 1-1.6372.85313--
AEBP2 121536 1-1.2182.82112--
ZNF174 7727 1-1.4102.9376--
ANKRD1 27063 1-2.4482.85315YesYes
STRAP 11171 1-1.8402.83857--
SALL1 6299 1-1.2852.8699--
FOXP4 116113 1-0.7222.8734--
NKX6-1 4825 1-1.3432.84713--
PROP1 5626 1-2.6362.8046YesYes
RBPJ 3516 1-1.6982.82948--

Subnetworks (95)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
int-snw-54857 2.797 13 11 1.31e-02 1.00e+00 2.546 3
int-snw-2146 2.904 8 6 2.96e-03 1.00e+00 3.246 3
int-snw-29915 2.853 9 7 4.31e-03 1.00e+00 3.076 3
int-snw-5434 3.157 12 12 3.84e-01 1.00e+00 1.076 1
int-snw-3162 2.821 11 9 3.58e-01 1.00e+00 1.202 1
int-snw-54985 2.815 9 7 3.04e-01 1.00e+00 1.491 1
int-snw-9650 2.847 13 12 4.08e-01 1.00e+00 0.961 1
int-snw-2033 3.120 8 8 3.73e-02 1.00e+00 2.661 2
int-snw-871 2.818 11 9 6.77e-02 1.00e+00 2.202 2
int-snw-25909 2.974 9 9 4.67e-02 1.00e+00 2.491 2
int-snw-50618 3.079 9 9 3.04e-01 1.00e+00 1.491 1
int-snw-1875 2.826 12 11 7.92e-02 1.00e+00 2.076 2
int-snw-7775 2.988 10 9 5.69e-02 1.00e+00 2.339 2
int-snw-1114 2.789 18 13 5.16e-01 1.00e+00 0.491 1
int-snw-54934 2.863 14 13 4.32e-01 1.00e+00 0.854 1
int-snw-4722 2.797 11 9 3.58e-01 1.00e+00 1.202 1
int-snw-5514 2.901 10 9 5.69e-02 1.00e+00 2.339 2
int-snw-90019 2.833 12 11 7.92e-02 1.00e+00 2.076 2
int-snw-4145 2.866 7 6 2.46e-01 1.00e+00 1.854 1
int-snw-116113 2.873 8 6 3.73e-02 1.00e+00 2.661 2
int-snw-1496 2.804 12 10 7.92e-02 1.00e+00 2.076 2
int-snw-4216 2.976 9 8 3.04e-01 1.00e+00 1.491 1
int-snw-54993 2.834 11 8 3.58e-01 1.00e+00 1.202 1
int-snw-8241 3.129 5 5 1.44e-02 1.00e+00 3.339 2
int-snw-892 2.968 17 15 1.44e-01 1.00e+00 1.574 2
int-snw-58 3.062 7 7 2.46e-01 1.00e+00 1.854 1
int-snw-29079 2.860 15 13 4.54e-01 1.00e+00 0.754 1
int-snw-10474 3.082 8 7 2.76e-01 1.00e+00 1.661 1
int-snw-9221 3.033 8 7 2.76e-01 1.00e+00 1.661 1
int-snw-11033 2.870 11 10 3.58e-01 1.00e+00 1.202 1
int-snw-4790 2.860 14 14 1.41e-04 1.00e+00 3.176 5
int-snw-10980 2.797 12 8 7.92e-02 1.00e+00 2.076 2
int-snw-4676 3.119 9 8 3.04e-01 1.00e+00 1.491 1
int-snw-5441 3.159 9 8 3.04e-01 1.00e+00 1.491 1
int-snw-79661 2.817 7 6 2.46e-01 1.00e+00 1.854 1
int-snw-5905 2.933 14 10 4.32e-01 1.00e+00 0.854 1
int-snw-219541 3.449 5 5 1.83e-01 1.00e+00 2.339 1
int-snw-2099 2.898 10 9 3.32e-01 1.00e+00 1.339 1
int-snw-10055 2.863 11 8 6.77e-02 1.00e+00 2.202 2
int-snw-1487 2.813 11 9 7.99e-03 1.00e+00 2.787 3
int-snw-1029 2.959 11 10 6.77e-02 1.00e+00 2.202 2
int-snw-122622 2.870 16 12 4.76e-01 1.00e+00 0.661 1
int-snw-57459 2.856 13 10 9.36e-05 1.00e+00 3.283 5
int-snw-4435 2.867 15 14 2.05e-04 1.00e+00 3.076 5
int-snw-221241 2.928 16 14 4.76e-01 1.00e+00 0.661 1
int-snw-4286 2.805 14 10 1.76e-03 1.00e+00 2.854 4
int-snw-57180 2.958 10 7 3.32e-01 1.00e+00 1.339 1
int-snw-463 3.108 9 7 4.67e-02 1.00e+00 2.491 2
int-snw-10379 2.844 13 12 1.30e-03 1.00e+00 2.961 4
int-snw-79602 2.811 13 9 4.08e-01 1.00e+00 0.961 1
int-snw-4670 2.857 18 17 3.22e-02 1.00e+00 2.076 3
int-snw-154796 2.924 7 5 2.46e-01 1.00e+00 1.854 1
int-snw-3883 2.804 15 12 4.54e-01 1.00e+00 0.754 1
int-snw-54514 2.806 18 16 5.29e-04 1.00e+00 2.813 5
int-snw-2521 3.004 10 9 5.69e-02 1.00e+00 2.339 2
int-snw-9169 2.923 13 12 9.12e-02 1.00e+00 1.961 2
int-snw-1432 2.955 13 12 4.08e-01 1.00e+00 0.961 1
int-snw-51366 3.078 9 9 3.04e-01 1.00e+00 1.491 1
int-snw-11171 2.838 13 12 1.31e-02 1.00e+00 2.546 3
int-snw-9443 3.137 9 8 3.04e-01 1.00e+00 1.491 1
int-snw-6688 2.870 9 9 4.31e-03 1.00e+00 3.076 3
int-snw-124944 2.884 11 9 3.58e-01 1.00e+00 1.202 1
int-snw-6879 2.899 8 8 3.73e-02 1.00e+00 2.661 2
int-snw-3895 2.825 17 15 4.96e-01 1.00e+00 0.574 1
int-snw-2483 2.912 9 7 3.04e-01 1.00e+00 1.491 1
int-snw-121536 2.821 14 10 8.50e-06 1.23e-01 3.439 6
int-snw-8697 2.971 12 11 3.84e-01 1.00e+00 1.076 1
int-snw-9968 3.206 7 7 2.46e-01 1.00e+00 1.854 1
int-snw-6280 2.913 15 14 1.17e-01 1.00e+00 1.754 2
int-snw-4901 2.857 13 11 4.08e-01 1.00e+00 0.961 1
int-snw-3516 2.829 5 4 1.44e-02 1.00e+00 3.339 2
int-snw-7342 2.945 8 6 2.76e-01 1.00e+00 1.661 1
int-snw-55161 2.994 10 8 3.32e-01 1.00e+00 1.339 1
int-snw-785 2.861 10 9 3.32e-01 1.00e+00 1.339 1
int-snw-11168 2.880 15 13 1.17e-01 1.00e+00 1.754 2
int-snw-6421 3.193 8 8 2.76e-01 1.00e+00 1.661 1
int-snw-55775 3.043 6 5 2.15e-01 1.00e+00 2.076 1
int-snw-22926 2.845 13 11 1.31e-02 1.00e+00 2.546 3
int-snw-1628 2.949 12 11 7.92e-02 1.00e+00 2.076 2
int-snw-84148 3.072 6 5 2.10e-02 1.00e+00 3.076 2
int-snw-4825 2.847 13 12 5.02e-06 7.24e-02 3.546 6
int-snw-7004 3.171 5 3 1.83e-01 1.00e+00 2.339 1
int-snw-10594 2.824 13 12 9.12e-02 1.00e+00 1.961 2
int-snw-6334 2.813 16 14 4.76e-01 1.00e+00 0.661 1
int-snw-51450 2.944 11 8 3.58e-01 1.00e+00 1.202 1
int-snw-79913 2.996 9 8 3.04e-01 1.00e+00 1.491 1
int-snw-83440 2.861 14 12 1.04e-01 1.00e+00 1.854 2
int-snw-50807 2.850 14 14 1.04e-01 1.00e+00 1.854 2
int-snw-3476 2.924 13 12 1.31e-02 1.00e+00 2.546 3
int-snw-6102 2.830 20 19 7.06e-03 1.00e+00 2.339 4
int-snw-7727 2.937 11 9 6.77e-02 1.00e+00 2.202 2
int-snw-5433 3.216 10 9 3.32e-01 1.00e+00 1.339 1
int-snw-5033 2.877 11 8 6.77e-02 1.00e+00 2.202 2
int-snw-6299 2.869 15 12 7.08e-07 1.02e-02 3.562 7
int-snw-89870 2.862 13 11 4.08e-01 1.00e+00 0.961 1