| GO:0005515 | protein binding | 198 | 6024 |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | 39 | 699 |
| GO:0030154 | cell differentiation | 5 | 301 |
| GO:0001078 | RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription | 5 | 59 |
| GO:0009952 | anterior/posterior pattern specification | 4 | 83 |
| GO:0008270 | zinc ion binding | 27 | 997 |
| GO:0048593 | camera-type eye morphogenesis | 1 | 16 |
| GO:0006974 | cellular response to DNA damage stimulus | 7 | 151 |
| GO:0010225 | response to UV-C | 2 | 9 |
| GO:0007283 | spermatogenesis | 3 | 262 |
| GO:0016363 | nuclear matrix | 6 | 91 |
| GO:0000400 | four-way junction DNA binding | 1 | 9 |
| GO:0003723 | RNA binding | 18 | 342 |
| GO:0003713 | transcription coactivator activity | 24 | 237 |
| GO:0044212 | transcription regulatory region DNA binding | 17 | 168 |
| GO:0034696 | response to prostaglandin F | 1 | 2 |
| GO:0006403 | RNA localization | 1 | 2 |
| GO:0006351 | transcription, DNA-templated | 57 | 1446 |
| GO:0031519 | PcG protein complex | 1 | 25 |
| GO:0005634 | nucleus | 159 | 4559 |
| GO:0006357 | regulation of transcription from RNA polymerase II promoter | 23 | 264 |
| GO:0003714 | transcription corepressor activity | 11 | 178 |
| GO:0000122 | negative regulation of transcription from RNA polymerase II promoter | 37 | 570 |
| GO:0003677 | DNA binding | 49 | 1218 |
| GO:0051276 | chromosome organization | 2 | 16 |
| GO:0031011 | Ino80 complex | 6 | 14 |
| GO:0034644 | cellular response to UV | 1 | 30 |
| GO:0000724 | double-strand break repair via homologous recombination | 2 | 55 |
| GO:0005667 | transcription factor complex | 17 | 175 |