GO:0006357

regulation of transcription from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0006357regulation of transcription from RNA polymerase II promoter23264

Term information on AmiGO 2: GO:0006357

Genes (23)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Chia-Hits Primary Chia-Hits Secondary
MED19 219541 30-2.6573.449115Yes-
YY1 7528 24-2.5723.120114YesYes
MED13L 23389 12-2.5503.15921Yes-
HES6 55502 8-2.5573.12011YesYes
ANXA4 307 7-2.4783.06215YesYes
MED14 9282 6-2.4203.13749Yes-
MED24 9862 6-2.4823.03339Yes-
MAPK14 1432 4-1.9022.955272--
MED17 9440 2-2.1612.86051Yes-
SPI1 6688 2-2.0032.870115YesYes
TADA3 10474 2-1.9113.08249--
SUB1 10923 2-2.0422.88027Yes-
MED7 9443 2-1.9133.13737--
MED4 29079 2-1.7852.86044--
SOX10 6663 2-1.4903.05033--
TEAD4 7004 1-1.6933.17114--
ACTL6B 51412 1-2.0422.81310Yes-
UBP1 7342 1-0.7362.94512--
ATF6 22926 1-1.3772.84526--
DBP 1628 1-1.4472.94926--
CITED1 4435 1-1.9822.86715--
HCFC2 29915 1-1.6372.85313--
ZSCAN32 54925 1-2.8402.9375Yes-

Subnetworks (67)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
int-snw-2146 2.904 8 6 8.69e-03 1.00e+00 3.772 2
int-snw-29915 2.853 9 7 1.10e-02 1.00e+00 3.602 2
int-snw-23530 2.970 7 6 1.21e-01 1.00e+00 2.964 1
int-snw-5434 3.157 12 12 1.99e-01 1.00e+00 2.187 1
int-snw-54985 2.815 9 7 1.53e-01 1.00e+00 2.602 1
int-snw-51429 2.870 17 16 2.16e-04 1.00e+00 3.684 4
int-snw-2033 3.120 8 8 8.69e-03 1.00e+00 3.772 2
int-snw-25909 2.974 9 9 1.10e-02 1.00e+00 3.602 2
int-snw-50618 3.079 9 9 1.53e-01 1.00e+00 2.602 1
int-snw-1875 2.826 12 11 1.95e-02 1.00e+00 3.187 2
int-snw-7775 2.988 10 9 1.69e-01 1.00e+00 2.450 1
int-snw-1114 2.789 18 13 2.83e-01 1.00e+00 1.602 1
int-snw-54934 2.863 14 13 3.46e-06 4.99e-02 4.286 5
int-snw-892 2.968 17 15 3.79e-02 1.00e+00 2.684 2
int-snw-58 3.062 7 7 1.21e-01 1.00e+00 2.964 1
int-snw-29079 2.860 15 13 2.34e-03 1.00e+00 3.450 3
int-snw-10474 3.082 8 7 1.37e-01 1.00e+00 2.772 1
int-snw-9221 3.033 8 7 3.17e-04 1.00e+00 4.357 3
int-snw-11033 2.870 11 10 1.84e-01 1.00e+00 2.312 1
int-snw-4790 2.860 14 14 2.63e-02 1.00e+00 2.964 2
int-snw-5441 3.159 9 8 1.10e-02 1.00e+00 3.602 2
int-snw-6663 3.050 6 4 1.05e-01 1.00e+00 3.187 1
int-snw-5905 2.933 14 10 2.63e-02 1.00e+00 2.964 2
int-snw-219541 3.449 5 5 8.82e-02 1.00e+00 3.450 1
int-snw-1487 2.813 11 9 1.84e-01 1.00e+00 2.312 1
int-snw-1029 2.959 11 10 1.84e-01 1.00e+00 2.312 1
int-snw-122622 2.870 16 12 2.56e-01 1.00e+00 1.772 1
int-snw-4435 2.867 15 14 1.28e-04 1.00e+00 3.865 4
int-snw-221241 2.928 16 14 3.38e-02 1.00e+00 2.772 2
int-snw-4286 2.805 14 10 2.63e-02 1.00e+00 2.964 2
int-snw-57180 2.958 10 7 1.69e-01 1.00e+00 2.450 1
int-snw-10379 2.844 13 12 2.28e-02 1.00e+00 3.071 2
int-snw-79602 2.811 13 9 2.14e-01 1.00e+00 2.071 1
int-snw-4670 2.857 18 17 2.83e-01 1.00e+00 1.602 1
int-snw-54514 2.806 18 16 4.21e-02 1.00e+00 2.602 2
int-snw-4927 2.843 15 13 2.34e-03 1.00e+00 3.450 3
int-snw-1601 2.837 12 10 1.99e-01 1.00e+00 2.187 1
int-snw-9169 2.923 13 12 2.14e-01 1.00e+00 2.071 1
int-snw-1432 2.955 13 12 2.14e-01 1.00e+00 2.071 1
int-snw-51366 3.078 9 9 1.53e-01 1.00e+00 2.602 1
int-snw-11171 2.838 13 12 2.28e-02 1.00e+00 3.071 2
int-snw-9443 3.137 9 8 4.69e-04 1.00e+00 4.187 3
int-snw-6688 2.870 9 9 1.10e-02 1.00e+00 3.602 2
int-snw-6879 2.899 8 8 1.37e-01 1.00e+00 2.772 1
int-snw-121536 2.821 14 10 2.63e-02 1.00e+00 2.964 2
int-snw-8697 2.971 12 11 4.84e-05 6.98e-01 4.187 4
int-snw-9968 3.206 7 7 1.21e-01 1.00e+00 2.964 1
int-snw-4901 2.857 13 11 2.14e-01 1.00e+00 2.071 1
int-snw-7342 2.945 8 6 1.37e-01 1.00e+00 2.772 1
int-snw-785 2.861 10 9 1.69e-01 1.00e+00 2.450 1
int-snw-11168 2.880 15 13 3.00e-02 1.00e+00 2.865 2
int-snw-22926 2.845 13 11 2.28e-02 1.00e+00 3.071 2
int-snw-55742 2.845 8 7 1.37e-01 1.00e+00 2.772 1
int-snw-6905 2.836 11 7 1.84e-01 1.00e+00 2.312 1
int-snw-1628 2.949 12 11 1.18e-03 1.00e+00 3.772 3
int-snw-4825 2.847 13 12 2.14e-01 1.00e+00 2.071 1
int-snw-7004 3.171 5 3 8.82e-02 1.00e+00 3.450 1
int-snw-6334 2.813 16 14 2.56e-01 1.00e+00 1.772 1
int-snw-51450 2.944 11 8 1.84e-01 1.00e+00 2.312 1
int-snw-79913 2.996 9 8 1.53e-01 1.00e+00 2.602 1
int-snw-83440 2.861 14 12 1.90e-03 1.00e+00 3.549 3
int-snw-3476 2.924 13 12 2.28e-02 1.00e+00 3.071 2
int-snw-6102 2.830 20 19 2.45e-05 3.53e-01 3.772 5
int-snw-7727 2.937 11 9 1.84e-01 1.00e+00 2.312 1
int-snw-5433 3.216 10 9 1.69e-01 1.00e+00 2.450 1
int-snw-79711 2.842 14 11 2.28e-01 1.00e+00 1.964 1
int-snw-89870 2.862 13 11 2.26e-06 3.26e-02 4.393 5