GO:0006366

transcription from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0006366transcription from RNA polymerase II promoter30419

Term information on AmiGO 2: GO:0006366

Genes (30)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Chia-Hits Primary Chia-Hits Secondary
POU5F1 5460 133-5.1483.538179YesYes
SRSF3 6428 73-2.9923.53854Yes-
NFRKB 4798 48-3.1293.10823YesYes
HCFC1 3054 40-2.9253.44971YesYes
MED19 219541 30-2.6573.449115Yes-
MED13L 23389 12-2.5503.15921Yes-
NFKB1 4790 9-2.1232.870263Yes-
NCBP1 4686 6-2.5103.14940YesYes
POLR2E 5434 4-2.0373.157115Yes-
CDX2 1045 3-2.0372.95533YesYes
TAF7 6879 3-2.1762.89938YesYes
POLR2D 5433 3-1.9983.21636--
FUBP1 8880 3-2.4142.95523YesYes
RREB1 6239 2-1.8302.85739--
SPI1 6688 2-2.0032.870115YesYes
POLR2L 5441 2-1.9723.15963--
MED4 29079 2-1.7852.86044--
COPS2 9318 2-2.5313.04346Yes-
SOX10 6663 2-1.4903.05033--
ZFHX3 463 1-1.2963.1088--
POLR2H 5437 1-1.9602.78941--
CREB3 10488 1-1.5622.821124--
NRL 4901 1-1.5992.85714--
MITF 4286 1-1.4582.80530--
ASH2L 9070 1-1.7562.85365--
IRF9 10379 1-1.7892.84432--
ZNF174 7727 1-1.4102.9376--
ZSCAN32 54925 1-2.8402.9375Yes-
NKX6-1 4825 1-1.3432.84713--
TAF12 6883 1-2.1342.82935Yes-

Subnetworks (133)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
int-snw-54857 2.797 13 11 2.14e-05 3.09e-01 3.727 5
int-snw-9097 2.974 8 6 2.10e-02 1.00e+00 3.105 2
int-snw-2146 2.904 8 6 1.22e-03 1.00e+00 3.690 3
int-snw-4653 2.922 11 10 3.38e-03 1.00e+00 3.231 3
int-snw-9086 2.957 14 13 3.38e-01 1.00e+00 1.298 1
int-snw-29915 2.853 9 7 2.31e-06 3.33e-02 4.257 5
int-snw-23530 2.970 7 6 7.81e-04 1.00e+00 3.883 3
int-snw-5434 3.157 12 12 1.35e-05 1.95e-01 3.842 5
int-snw-3162 2.821 11 9 3.38e-03 1.00e+00 3.231 3
int-snw-6850 3.067 9 8 2.65e-02 1.00e+00 2.935 2
int-snw-4035 2.799 7 5 1.60e-02 1.00e+00 3.298 2
int-snw-54985 2.815 9 7 2.31e-06 3.33e-02 4.257 5
int-snw-9650 2.847 13 12 3.18e-01 1.00e+00 1.405 1
int-snw-51429 2.870 17 16 1.24e-03 1.00e+00 3.018 4
int-snw-2033 3.120 8 8 2.10e-01 1.00e+00 2.105 1
int-snw-9706 3.197 7 7 1.60e-02 1.00e+00 3.298 2
int-snw-871 2.818 11 9 3.38e-03 1.00e+00 3.231 3
int-snw-25909 2.974 9 9 2.31e-06 3.33e-02 4.257 5
int-snw-50618 3.079 9 9 2.65e-02 1.00e+00 2.935 2
int-snw-1875 2.826 12 11 4.58e-02 1.00e+00 2.520 2
int-snw-7775 2.988 10 9 3.25e-02 1.00e+00 2.783 2
int-snw-1114 2.789 18 13 1.61e-08 2.32e-04 3.935 8
int-snw-54458 2.901 9 5 2.33e-01 1.00e+00 1.935 1
int-snw-54934 2.863 14 13 5.58e-04 1.00e+00 3.298 4
int-snw-4722 2.797 11 9 3.89e-02 1.00e+00 2.646 2
int-snw-5514 2.901 10 9 3.25e-02 1.00e+00 2.783 2
int-snw-90019 2.833 12 11 4.58e-02 1.00e+00 2.520 2
int-snw-4145 2.866 7 6 1.60e-02 1.00e+00 3.298 2
int-snw-116113 2.873 8 6 4.48e-05 6.46e-01 4.105 4
int-snw-10309 2.866 5 4 7.94e-03 1.00e+00 3.783 2
int-snw-1496 2.804 12 10 2.98e-01 1.00e+00 1.520 1
int-snw-4216 2.976 9 8 2.33e-01 1.00e+00 1.935 1
int-snw-54993 2.834 11 8 1.97e-04 1.00e+00 3.646 4
int-snw-663 2.989 9 8 1.79e-03 1.00e+00 3.520 3
int-snw-8241 3.129 5 5 7.94e-03 1.00e+00 3.783 2
int-snw-892 2.968 17 15 9.36e-05 1.00e+00 3.340 5
int-snw-58 3.062 7 7 1.87e-01 1.00e+00 2.298 1
int-snw-6733 3.104 7 5 1.60e-02 1.00e+00 3.298 2
int-snw-29079 2.860 15 13 2.32e-06 3.35e-02 3.783 6
int-snw-10474 3.082 8 7 2.10e-01 1.00e+00 2.105 1
int-snw-9221 3.033 8 7 1.05e-06 1.52e-02 4.427 5
int-snw-11033 2.870 11 10 2.77e-01 1.00e+00 1.646 1
int-snw-3184 3.117 8 8 2.10e-02 1.00e+00 3.105 2
int-snw-7812 2.847 10 9 2.55e-01 1.00e+00 1.783 1
int-snw-4790 2.860 14 14 6.98e-03 1.00e+00 2.883 3
int-snw-10980 2.797 12 8 4.58e-02 1.00e+00 2.520 2
int-snw-4676 3.119 9 8 2.33e-01 1.00e+00 1.935 1
int-snw-5441 3.159 9 8 4.53e-08 6.53e-04 4.520 6
int-snw-6663 3.050 6 4 1.01e-05 1.45e-01 4.520 4
int-snw-79661 2.817 7 6 2.29e-05 3.31e-01 4.298 4
int-snw-5905 2.933 14 10 5.58e-04 1.00e+00 3.298 4
int-snw-219541 3.449 5 5 3.43e-06 4.95e-02 4.783 4
int-snw-2099 2.898 10 9 3.25e-02 1.00e+00 2.783 2
int-snw-10055 2.863 11 8 8.08e-06 1.17e-01 3.968 5
int-snw-1487 2.813 11 9 8.08e-06 1.17e-01 3.968 5
int-snw-1029 2.959 11 10 3.89e-02 1.00e+00 2.646 2
int-snw-122622 2.870 16 12 7.73e-02 1.00e+00 2.105 2
int-snw-6789 3.110 10 10 3.25e-02 1.00e+00 2.783 2
int-snw-57459 2.856 13 10 4.08e-04 1.00e+00 3.405 4
int-snw-4435 2.867 15 14 8.54e-03 1.00e+00 2.783 3
int-snw-221241 2.928 16 14 1.52e-07 2.19e-03 3.913 7
int-snw-4286 2.805 14 10 1.43e-06 2.06e-02 3.883 6
int-snw-57180 2.958 10 7 3.25e-02 1.00e+00 2.783 2
int-snw-463 3.108 9 7 2.31e-06 3.33e-02 4.257 5
int-snw-10379 2.844 13 12 4.08e-04 1.00e+00 3.405 4
int-snw-1292 2.925 6 5 1.17e-02 1.00e+00 3.520 2
int-snw-79602 2.811 13 9 5.60e-03 1.00e+00 2.990 3
int-snw-7621 2.905 5 4 7.94e-03 1.00e+00 3.783 2
int-snw-4670 2.857 18 17 8.00e-06 1.15e-01 3.520 6
int-snw-154796 2.924 7 5 1.87e-01 1.00e+00 2.298 1
int-snw-3883 2.804 15 12 6.89e-02 1.00e+00 2.198 2
int-snw-54514 2.806 18 16 1.44e-02 1.00e+00 2.520 3
int-snw-2521 3.004 10 9 3.25e-02 1.00e+00 2.783 2
int-snw-5073 2.938 9 8 1.79e-03 1.00e+00 3.520 3
int-snw-4927 2.843 15 13 2.32e-06 3.35e-02 3.783 6
int-snw-1601 2.837 12 10 4.40e-03 1.00e+00 3.105 3
int-snw-9169 2.923 13 12 5.60e-03 1.00e+00 2.990 3
int-snw-1432 2.955 13 12 5.60e-03 1.00e+00 2.990 3
int-snw-51366 3.078 9 9 2.31e-06 3.33e-02 4.257 5
int-snw-11171 2.838 13 12 5.60e-03 1.00e+00 2.990 3
int-snw-22898 2.935 6 5 1.62e-01 1.00e+00 2.520 1
int-snw-9443 3.137 9 8 7.88e-05 1.00e+00 3.935 4
int-snw-6688 2.870 9 9 7.88e-05 1.00e+00 3.935 4
int-snw-124944 2.884 11 9 1.97e-04 1.00e+00 3.646 4
int-snw-2147 2.904 8 5 2.10e-01 1.00e+00 2.105 1
int-snw-6879 2.899 8 8 1.22e-03 1.00e+00 3.690 3
int-snw-3895 2.825 17 15 3.94e-01 1.00e+00 1.018 1
int-snw-4214 2.975 8 8 2.10e-01 1.00e+00 2.105 1
int-snw-2483 2.912 9 7 7.88e-05 1.00e+00 3.935 4
int-snw-121536 2.821 14 10 3.26e-05 4.70e-01 3.620 5
int-snw-8697 2.971 12 11 1.35e-05 1.95e-01 3.842 5
int-snw-9968 3.206 7 7 2.29e-05 3.31e-01 4.298 4
int-snw-6280 2.913 15 14 3.58e-01 1.00e+00 1.198 1
int-snw-4901 2.857 13 11 4.08e-04 1.00e+00 3.405 4
int-snw-8971 3.504 5 5 1.37e-01 1.00e+00 2.783 1
int-snw-3516 2.829 5 4 3.43e-06 4.95e-02 4.783 4
int-snw-7342 2.945 8 6 4.48e-05 6.46e-01 4.105 4
int-snw-10482 3.538 5 5 7.94e-03 1.00e+00 3.783 2
int-snw-55161 2.994 10 8 2.55e-01 1.00e+00 1.783 1
int-snw-785 2.861 10 9 3.25e-02 1.00e+00 2.783 2
int-snw-11168 2.880 15 13 8.54e-03 1.00e+00 2.783 3
int-snw-6421 3.193 8 8 2.10e-02 1.00e+00 3.105 2
int-snw-29107 3.066 8 7 1.22e-03 1.00e+00 3.690 3
int-snw-55775 3.043 6 5 1.17e-02 1.00e+00 3.520 2
int-snw-51807 3.103 8 7 2.10e-02 1.00e+00 3.105 2
int-snw-22926 2.845 13 11 5.60e-03 1.00e+00 2.990 3
int-snw-2549 2.911 6 5 1.17e-02 1.00e+00 3.520 2
int-snw-55742 2.845 8 7 2.10e-02 1.00e+00 3.105 2
int-snw-6905 2.836 11 7 3.89e-02 1.00e+00 2.646 2
int-snw-1996 3.149 7 6 7.81e-04 1.00e+00 3.883 3
int-snw-1471 2.933 9 8 2.65e-02 1.00e+00 2.935 2
int-snw-1628 2.949 12 11 2.98e-01 1.00e+00 1.520 1
int-snw-4678 2.951 9 8 2.65e-02 1.00e+00 2.935 2
int-snw-84148 3.072 6 5 4.56e-04 1.00e+00 4.105 3
int-snw-4825 2.847 13 12 2.14e-05 3.09e-01 3.727 5
int-snw-7004 3.171 5 3 1.37e-01 1.00e+00 2.783 1
int-snw-10594 2.824 13 12 5.32e-02 1.00e+00 2.405 2
int-snw-6334 2.813 16 14 7.73e-02 1.00e+00 2.105 2
int-snw-51450 2.944 11 8 8.08e-06 1.17e-01 3.968 5
int-snw-79913 2.996 9 8 2.65e-02 1.00e+00 2.935 2
int-snw-83440 2.861 14 12 3.38e-01 1.00e+00 1.298 1
int-snw-50807 2.850 14 14 6.09e-02 1.00e+00 2.298 2
int-snw-3476 2.924 13 12 3.18e-01 1.00e+00 1.405 1
int-snw-6102 2.830 20 19 2.35e-03 1.00e+00 2.783 4
int-snw-7727 2.937 11 9 3.38e-03 1.00e+00 3.231 3
int-snw-5433 3.216 10 9 4.51e-06 6.51e-02 4.105 5
int-snw-5033 2.877 11 8 1.97e-04 1.00e+00 3.646 4
int-snw-6299 2.869 15 12 4.77e-05 6.88e-01 3.520 5
int-snw-79711 2.842 14 11 6.98e-03 1.00e+00 2.883 3
int-snw-4076 3.014 10 9 3.25e-02 1.00e+00 2.783 2
int-snw-640 2.915 12 9 4.58e-02 1.00e+00 2.520 2
int-snw-23559 2.840 10 8 2.55e-01 1.00e+00 1.783 1
int-snw-89870 2.862 13 11 2.14e-05 3.09e-01 3.727 5