GO:0000122

negative regulation of transcription from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0000122negative regulation of transcription from RNA polymerase II promoter29456

Term information on AmiGO 2: GO:0000122

Genes (29)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Transcription factor Chia-Hits Primary Chia-Hits Secondary
PHB 5245 82-2.7432.68936-YesYes
SUV39H2 79723 27-2.3072.41021-YesYes
SFPQ 6421 15-2.0512.389142TFYes-
TPR 7175 10-2.6382.44536TFYesYes
FOXM1 2305 9-1.6692.412210TF--
CGGBP1 8545 5-2.6012.3265-YesYes
EZH2 2146 5-1.6312.315116TF--
CNOT1 23019 4-2.3472.26334-Yes-
NCOA2 10499 4-1.7862.32695TF--
BCL6B 255877 3-2.7232.3409TFYesYes
NFIB 4781 2-1.5052.30740TF--
YY1 7528 2-2.5722.23854TFYesYes
GATA2 2624 2-1.6452.340126TF--
SMARCA4 6597 2-1.3812.251114TF--
NFIC 4782 2-1.8442.28044TF--
ZFHX3 463 1-1.2962.41238TF--
SMARCA2 6595 1-1.1092.24121TF--
GABPA 2551 1-1.4422.23858TF--
HDAC1 3065 1-1.7122.23213TF--
JUP 3728 1-1.3702.2043TF--
NR2C1 7181 1-1.4532.2398TF--
TRIM28 10155 1-1.2342.210190TF--
NFIX 4784 1-1.7722.2026TF--
WWTR1 25937 1-1.8862.20443TF--
TCF3 6929 1-1.2272.20498TF--
PLK1 5347 1-1.5922.22853---
C1QBP 708 1-0.6982.20041---
PCGF6 84108 1-0.5302.1991TF--
MEN1 4221 1-1.2262.24013---

Subnetworks (115)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
reg-snw-8888 2.326 13 11 2.04e-02 1.00e+00 2.305 3
reg-snw-3832 2.189 15 11 3.03e-02 1.00e+00 2.099 3
reg-snw-23279 2.387 13 10 4.63e-01 1.00e+00 0.720 1
reg-snw-84455 2.239 14 9 1.37e-01 1.00e+00 1.613 2
reg-snw-146956 2.199 8 7 3.18e-01 1.00e+00 1.421 1
reg-snw-10576 2.377 20 13 6.39e-02 1.00e+00 1.684 3
reg-snw-9732 2.379 12 9 4.37e-01 1.00e+00 0.836 1
reg-snw-9328 2.204 13 7 4.63e-01 1.00e+00 0.720 1
reg-snw-8396 2.246 8 5 3.18e-01 1.00e+00 1.421 1
reg-snw-8458 2.382 9 7 3.50e-01 1.00e+00 1.251 1
reg-snw-27130 2.286 18 13 2.04e-01 1.00e+00 1.251 2
reg-snw-1175 2.367 11 8 4.09e-01 1.00e+00 0.961 1
reg-snw-5434 2.644 7 7 2.85e-01 1.00e+00 1.613 1
reg-snw-284695 2.380 7 6 2.85e-01 1.00e+00 1.613 1
reg-snw-55153 2.231 17 12 5.57e-01 1.00e+00 0.333 1
reg-snw-64978 2.247 5 4 2.13e-01 1.00e+00 2.099 1
reg-snw-7090 2.251 25 16 1.09e-01 1.00e+00 1.362 3
reg-snw-908 2.244 11 8 4.09e-01 1.00e+00 0.961 1
reg-snw-516 2.291 5 3 2.13e-01 1.00e+00 2.099 1
reg-snw-84948 2.194 5 3 2.13e-01 1.00e+00 2.099 1
reg-snw-11051 2.307 25 17 1.09e-01 1.00e+00 1.362 3
reg-snw-27338 2.342 19 13 2.22e-01 1.00e+00 1.173 2
reg-snw-2551 2.238 10 7 7.64e-02 1.00e+00 2.099 2
reg-snw-9650 2.380 15 13 5.12e-01 1.00e+00 0.514 1
reg-snw-5425 2.393 9 6 3.50e-01 1.00e+00 1.251 1
reg-snw-4221 2.240 13 9 1.21e-01 1.00e+00 1.720 2
reg-snw-79872 2.445 6 5 2.49e-01 1.00e+00 1.836 1
reg-snw-90850 2.200 12 6 4.37e-01 1.00e+00 0.836 1
reg-snw-2783 2.192 16 9 5.35e-01 1.00e+00 0.421 1
reg-snw-5347 2.228 7 6 3.08e-03 1.00e+00 3.198 3
reg-snw-4927 2.292 10 6 3.80e-01 1.00e+00 1.099 1
reg-snw-91746 2.300 13 10 1.21e-01 1.00e+00 1.720 2
reg-snw-51566 2.348 8 6 3.18e-01 1.00e+00 1.421 1
reg-snw-9442 2.229 15 10 5.12e-01 1.00e+00 0.514 1
reg-snw-3735 2.341 8 5 3.18e-01 1.00e+00 1.421 1
reg-snw-2314 2.213 10 9 3.80e-01 1.00e+00 1.099 1
reg-snw-191 2.287 20 14 6.16e-01 1.00e+00 0.099 1
reg-snw-26263 2.369 14 10 4.88e-01 1.00e+00 0.613 1
reg-snw-9631 2.312 20 15 6.39e-02 1.00e+00 1.684 3
reg-snw-90480 2.431 8 7 3.18e-01 1.00e+00 1.421 1
reg-snw-11180 2.242 17 11 1.87e-01 1.00e+00 1.333 2
reg-snw-128637 2.303 5 3 2.13e-01 1.00e+00 2.099 1
reg-snw-57541 2.192 14 9 4.88e-01 1.00e+00 0.613 1
reg-snw-137695 2.215 8 5 3.18e-01 1.00e+00 1.421 1
reg-snw-150962 2.255 13 10 1.21e-01 1.00e+00 1.720 2
reg-snw-84231 2.194 11 7 4.09e-01 1.00e+00 0.961 1
reg-snw-649 2.373 5 3 2.13e-01 1.00e+00 2.099 1
reg-snw-25996 2.217 21 16 7.21e-02 1.00e+00 1.613 3
reg-snw-8562 2.263 32 24 1.86e-01 1.00e+00 1.005 3
reg-snw-7596 2.279 16 11 5.35e-01 1.00e+00 0.421 1
reg-snw-64146 2.308 12 8 4.37e-01 1.00e+00 0.836 1
reg-snw-6051 2.223 15 9 5.12e-01 1.00e+00 0.514 1
reg-snw-10055 2.386 18 13 5.78e-01 1.00e+00 0.251 1
reg-snw-8189 2.492 6 5 2.49e-01 1.00e+00 1.836 1
reg-snw-9063 2.308 16 10 1.70e-01 1.00e+00 1.421 2
reg-snw-9477 2.503 10 8 3.80e-01 1.00e+00 1.099 1
reg-snw-51060 2.225 29 24 4.42e-02 1.00e+00 1.563 4
reg-snw-708 2.200 33 23 1.98e-01 1.00e+00 0.961 3
reg-snw-7334 2.284 9 7 3.50e-01 1.00e+00 1.251 1
reg-snw-5471 2.239 28 22 1.40e-01 1.00e+00 1.198 3
reg-snw-2068 2.379 6 4 2.49e-01 1.00e+00 1.836 1
reg-snw-9330 2.428 11 8 4.09e-01 1.00e+00 0.961 1
reg-snw-80830 2.230 19 11 2.22e-01 1.00e+00 1.173 2
reg-snw-30968 2.435 5 3 2.13e-01 1.00e+00 2.099 1
reg-snw-22948 2.389 17 13 4.22e-02 1.00e+00 1.918 3
reg-snw-1586 2.229 5 2 2.13e-01 1.00e+00 2.099 1
reg-snw-7543 2.200 20 13 2.39e-01 1.00e+00 1.099 2
reg-snw-4781 2.202 8 5 5.05e-02 1.00e+00 2.421 2
reg-snw-10767 2.276 18 12 5.78e-01 1.00e+00 0.251 1
reg-snw-81608 2.459 12 10 4.37e-01 1.00e+00 0.836 1
reg-snw-28985 2.410 19 16 2.22e-01 1.00e+00 1.173 2
reg-snw-5889 2.212 27 21 3.62e-01 1.00e+00 0.666 2
reg-snw-8624 2.286 24 20 3.10e-01 1.00e+00 0.836 2
reg-snw-7355 2.338 18 14 5.78e-01 1.00e+00 0.251 1
reg-snw-1153 2.386 12 9 1.05e-01 1.00e+00 1.836 2
reg-snw-463 2.412 6 4 2.88e-02 1.00e+00 2.836 2
reg-snw-8815 2.203 5 3 2.13e-01 1.00e+00 2.099 1
reg-snw-6790 2.315 19 15 1.04e-02 1.00e+00 2.173 4
reg-snw-2902 2.207 6 3 2.49e-01 1.00e+00 1.836 1
reg-snw-11333 2.430 10 9 3.80e-01 1.00e+00 1.099 1
reg-snw-2624 2.234 6 5 2.88e-02 1.00e+00 2.836 2
reg-snw-80153 2.203 32 22 1.86e-01 1.00e+00 1.005 3
reg-snw-10499 2.282 7 6 3.91e-02 1.00e+00 2.613 2
reg-snw-54471 2.203 7 5 2.85e-01 1.00e+00 1.613 1
reg-snw-6046 2.210 13 9 1.21e-01 1.00e+00 1.720 2
reg-snw-83998 2.204 14 9 3.23e-03 1.00e+00 2.613 4
reg-snw-10362 2.239 13 8 4.63e-01 1.00e+00 0.720 1
reg-snw-6874 2.285 17 13 5.57e-01 1.00e+00 0.333 1
reg-snw-5905 2.303 13 8 4.63e-01 1.00e+00 0.720 1
reg-snw-5605 2.472 8 6 3.18e-01 1.00e+00 1.421 1
reg-snw-26001 2.290 10 8 3.80e-01 1.00e+00 1.099 1
reg-snw-83990 2.201 19 11 2.22e-01 1.00e+00 1.173 2
reg-snw-2733 2.414 11 8 4.09e-01 1.00e+00 0.961 1
reg-snw-1062 2.228 15 12 1.53e-01 1.00e+00 1.514 2
reg-snw-54453 2.299 7 6 2.85e-01 1.00e+00 1.613 1
reg-snw-5682 2.230 13 8 4.63e-01 1.00e+00 0.720 1
reg-snw-23780 2.223 24 16 6.83e-01 1.00e+00 -0.164 1
reg-snw-3145 2.226 23 17 8.97e-02 1.00e+00 1.482 3
reg-snw-1111 2.288 22 16 1.76e-02 1.00e+00 1.961 4
reg-snw-10038 2.226 10 8 7.64e-02 1.00e+00 2.099 2
reg-snw-23310 2.232 10 7 7.64e-02 1.00e+00 2.099 2
reg-snw-23658 2.259 19 13 5.97e-01 1.00e+00 0.173 1
reg-snw-84108 2.199 30 22 4.92e-02 1.00e+00 1.514 4
reg-snw-9921 2.335 6 3 2.49e-01 1.00e+00 1.836 1
reg-snw-6595 2.241 15 10 3.03e-02 1.00e+00 2.099 3
reg-snw-4728 2.201 6 3 2.49e-01 1.00e+00 1.836 1
reg-snw-23254 2.340 6 4 2.88e-02 1.00e+00 2.836 2
reg-snw-10617 2.212 15 10 5.12e-01 1.00e+00 0.514 1
reg-snw-151246 2.200 16 11 3.60e-02 1.00e+00 2.005 3
reg-snw-26233 2.689 5 5 2.13e-01 1.00e+00 2.099 1
reg-snw-5034 2.298 13 9 4.63e-01 1.00e+00 0.720 1
reg-snw-339175 2.192 23 15 6.68e-01 1.00e+00 -0.103 1
reg-snw-1452 2.207 7 5 2.85e-01 1.00e+00 1.613 1
reg-snw-84320 2.274 23 16 2.92e-01 1.00e+00 0.897 2
reg-snw-2335 2.280 7 4 2.85e-01 1.00e+00 1.613 1