reg-snw-151246

Statistics

Dataset Score p-value 1 p-value 2 p-value 3
chia-screen-data-Fav 2.200 2.87e-07 4.67e-02 3.55e-02
chia-screen-data-Fav-reg-snw-151246 subnetwork

Genes (16)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Transcription factor Chia-Hits Primary Chia-Hits Secondary
NDUFA4L2 56901 44-2.4772.45921-Yes-
CENPA 1058 27-2.1852.393205TFYes-
AGPS 8540 23-2.4242.41027-YesYes
EZH2 2146 5-1.6312.315116TF--
RFWD3 55159 2-1.5342.20094TF--
TPR 7175 10-2.6382.44536TFYesYes
NCBP1 4686 41-2.5102.45944-YesYes
SUV39H2 79723 27-2.3072.41021-YesYes
SYNCRIP 10492 42-2.4012.503144TFYesYes
[ SGOL2 ] 151246 1-1.2412.20046---
TTF2 8458 6-1.6462.38276TF--
ETF1 2107 35-2.8292.5036-YesYes
GSPT1 2935 32-2.3132.50317-YesYes
HNRNPU 3192 39-2.8692.64433-Yes-
CPSF3 51692 43-2.6862.50331-YesYes
PRPF40A 55660 3-1.5112.307106TF--

Interactions (19)

Gene Symbol 1 Entrez Gene ID 1 Gene Symbol 2 Entrez Gene ID 2 Type Direction Origin databases / Sources
HNRNPU 3192 PRPF40A 55660 pd < reg.ITFP.txt: no annot
EZH2 2146 SGOL2 151246 pd > reg.ITFP.txt: no annot
RFWD3 55159 SGOL2 151246 pd > reg.ITFP.txt: no annot
TTF2 8458 SGOL2 151246 pd > reg.ITFP.txt: no annot
CENPA 1058 SUV39H2 79723 pd > reg.ITFP.txt: no annot
AGPS 8540 SYNCRIP 10492 pd < reg.ITFP.txt: no annot
SYNCRIP 10492 SUV39H2 79723 pd > reg.ITFP.txt: no annot
TTF2 8458 AGPS 8540 pd > reg.ITFP.txt: no annot
TTF2 8458 RFWD3 55159 pd <> reg.ITFP.txt: no annot
CENPA 1058 SGOL2 151246 pd > reg.ITFP.txt: no annot
SYNCRIP 10492 SGOL2 151246 pd > reg.ITFP.txt: no annot
PRPF40A 55660 SGOL2 151246 pd > reg.ITFP.txt: no annot
TPR 7175 SGOL2 151246 pd > reg.ITFP.txt: no annot
CENPA 1058 EZH2 2146 pd <> reg.ITFP.txt: no annot
ETF1 2107 SYNCRIP 10492 pd < reg.ITFP.txt: no annot
NCBP1 4686 TPR 7175 pd < reg.ITFP.txt: no annot
GSPT1 2935 SYNCRIP 10492 pd < reg.ITFP.txt: no annot
SYNCRIP 10492 CPSF3 51692 pd > reg.ITFP.txt: no annot
CENPA 1058 NDUFA4L2 56901 pd > reg.ITFP.txt: no annot

Related GO terms (228)

Accession number Name Hypergeometric test Corrected p-value Enrichment ratio Occurrence in subnetwork Occurrences in all snw genes Occurrences in all int/reg genes
GO:0008380RNA splicing1.48e-071.44e-034.472621165
GO:0003723RNA binding1.60e-061.56e-023.890622247
GO:0003747translation release factor activity2.52e-062.46e-029.253222
GO:0030529ribonucleoprotein complex7.79e-067.60e-024.8964582
GO:0070934CRD-mediated mRNA stabilization2.51e-052.45e-017.931225
GO:0006369termination of RNA polymerase II transcription2.94e-052.87e-015.5903538
GO:0000775chromosome, centromeric region3.70e-053.62e-015.4813641
GO:0070937CRD-mediated mRNA stability complex3.76e-053.67e-017.668226
GO:0000398mRNA splicing, via spliceosome4.54e-054.43e-014.253415128
GO:0006379mRNA cleavage9.00e-058.79e-017.083229
GO:0006479protein methylation1.37e-041.00e+006.7942211
GO:0044822poly(A) RNA binding1.42e-041.00e+002.419745799
GO:0005515protein binding2.51e-041.00e+001.051141984124
GO:0005654nucleoplasm2.53e-041.00e+002.286768876
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay3.17e-041.00e+004.4463584
GO:0003682chromatin binding6.17e-041.00e+003.276415252
GO:0031124mRNA 3'-end processing1.45e-031.00e+005.1242435
GO:0014013regulation of gliogenesis1.64e-031.00e+009.253111
GO:0016149translation release factor activity, codon specific1.64e-031.00e+009.253111
GO:1901673regulation of spindle assembly involved in mitosis1.64e-031.00e+009.253111
GO:0045605negative regulation of epidermal cell differentiation1.64e-031.00e+009.253111
GO:0043578nuclear matrix organization1.64e-031.00e+009.253111
GO:0010965regulation of mitotic sister chromatid separation1.64e-031.00e+009.253111
GO:0000939condensed chromosome inner kinetochore1.64e-031.00e+009.253111
GO:0008609alkylglycerone-phosphate synthase activity1.64e-031.00e+009.253111
GO:0008079translation termination factor activity1.64e-031.00e+009.253111
GO:0006404RNA import into nucleus1.64e-031.00e+009.253111
GO:0031453positive regulation of heterochromatin assembly1.64e-031.00e+009.253111
GO:0051754meiotic sister chromatid cohesion, centromeric1.64e-031.00e+009.253111
GO:0048511rhythmic process1.71e-031.00e+005.0052538
GO:0006396RNA processing1.89e-031.00e+004.9312440
GO:0006406mRNA export from nucleus2.29e-031.00e+004.7942744
GO:0000189MAPK import into nucleus3.27e-031.00e+008.253112
GO:0031990mRNA export from nucleus in response to heat stress3.27e-031.00e+008.253112
GO:0030892mitotic cohesin complex3.27e-031.00e+008.253112
GO:0006353DNA-templated transcription, termination3.27e-031.00e+008.253112
GO:0042306regulation of protein import into nucleus3.27e-031.00e+008.253112
GO:0005846nuclear cap binding complex3.27e-031.00e+008.253112
GO:0070840dynein complex binding3.27e-031.00e+008.253112
GO:0008611ether lipid biosynthetic process3.27e-031.00e+008.253112
GO:0046832negative regulation of RNA export from nucleus3.27e-031.00e+008.253112
GO:0071013catalytic step 2 spliceosome4.35e-031.00e+004.3232561
GO:0016032viral process4.35e-031.00e+002.512430428
GO:0006415translational termination4.64e-031.00e+004.2762263
GO:0008762UDP-N-acetylmuramate dehydrogenase activity4.91e-031.00e+007.668113
GO:0051154negative regulation of striated muscle cell differentiation4.91e-031.00e+007.668113
GO:0036123histone H3-K9 dimethylation4.91e-031.00e+007.668113
GO:0000778condensed nuclear chromosome kinetochore4.91e-031.00e+007.668123
GO:0070314G1 to G0 transition4.91e-031.00e+007.668113
GO:0006405RNA export from nucleus4.91e-031.00e+007.668113
GO:0010793regulation of mRNA export from nucleus4.91e-031.00e+007.668113
GO:2000001regulation of DNA damage checkpoint4.91e-031.00e+007.668113
GO:0071459protein localization to chromosome, centromeric region4.91e-031.00e+007.668113
GO:0001649osteoblast differentiation6.35e-031.00e+004.0442574
GO:0046976histone methyltransferase activity (H3-K27 specific)6.54e-031.00e+007.253114
GO:0045292mRNA cis splicing, via spliceosome6.54e-031.00e+007.253114
GO:0097452GAIT complex6.54e-031.00e+007.253124
GO:0031442positive regulation of mRNA 3'-end processing6.54e-031.00e+007.253114
GO:0006449regulation of translational termination6.54e-031.00e+007.253114
GO:0006333chromatin assembly or disassembly6.54e-031.00e+007.253114
GO:0036124histone H3-K9 trimethylation6.54e-031.00e+007.253124
GO:0006999nuclear pore organization6.54e-031.00e+007.253114
GO:0070734histone H3-K27 methylation6.54e-031.00e+007.253114
GO:0070849response to epidermal growth factor6.54e-031.00e+007.253114
GO:0044615nuclear pore nuclear basket6.54e-031.00e+007.253114
GO:0004521endoribonuclease activity8.17e-031.00e+006.931115
GO:0008610lipid biosynthetic process8.17e-031.00e+006.931115
GO:0006398histone mRNA 3'-end processing8.17e-031.00e+006.931115
GO:0046825regulation of protein export from nucleus8.17e-031.00e+006.931115
GO:0021695cerebellar cortex development8.17e-031.00e+006.931115
GO:0043495protein anchor8.17e-031.00e+006.931115
GO:0071168protein localization to chromatin8.17e-031.00e+006.931125
GO:0071204histone pre-mRNA 3'end processing complex8.17e-031.00e+006.931115
GO:0097371MDM2/MDM4 family protein binding8.17e-031.00e+006.931115
GO:0010467gene expression9.57e-031.00e+002.190449535
GO:0090267positive regulation of mitotic cell cycle spindle assembly checkpoint9.79e-031.00e+006.668116
GO:0042754negative regulation of circadian rhythm9.79e-031.00e+006.668126
GO:0046974histone methyltransferase activity (H3-K9 specific)9.79e-031.00e+006.668116
GO:0034244negative regulation of transcription elongation from RNA polymerase II promoter1.14e-021.00e+006.446117
GO:0042054histone methyltransferase activity1.14e-021.00e+006.446117
GO:0007140male meiosis1.14e-021.00e+006.446117
GO:00084095'-3' exonuclease activity1.14e-021.00e+006.446127
GO:0000339RNA cap binding1.14e-021.00e+006.446117
GO:0000780condensed nuclear chromosome, centromeric region1.14e-021.00e+006.446117
GO:0005868cytoplasmic dynein complex1.14e-021.00e+006.446117
GO:0045814negative regulation of gene expression, epigenetic1.14e-021.00e+006.446117
GO:0051382kinetochore assembly1.14e-021.00e+006.446127
GO:0005845mRNA cap binding complex1.30e-021.00e+006.253118
GO:0042405nuclear inclusion body1.30e-021.00e+006.253118
GO:0051292nuclear pore complex assembly1.30e-021.00e+006.253148
GO:0071949FAD binding1.30e-021.00e+006.253118
GO:0035457cellular response to interferon-alpha1.30e-021.00e+006.253118
GO:0000278mitotic cell cycle1.35e-021.00e+002.544328314
GO:0006397mRNA processing1.36e-021.00e+003.472212110
GO:0045947negative regulation of translational initiation1.47e-021.00e+006.083119
GO:0048387negative regulation of retinoic acid receptor signaling pathway1.47e-021.00e+006.083129
GO:0031571mitotic G1 DNA damage checkpoint1.47e-021.00e+006.083119
GO:0005847mRNA cleavage and polyadenylation specificity factor complex1.47e-021.00e+006.083139
GO:0008143poly(A) binding1.63e-021.00e+005.9311210
GO:0032465regulation of cytokinesis1.63e-021.00e+005.9311110
GO:0051019mitogen-activated protein kinase binding1.79e-021.00e+005.7941111
GO:0008023transcription elongation factor complex1.79e-021.00e+005.7941211
GO:0008334histone mRNA metabolic process1.79e-021.00e+005.7941111
GO:0090316positive regulation of intracellular protein transport1.79e-021.00e+005.7941111
GO:0045120pronucleus1.79e-021.00e+005.7941311
GO:0005487nucleocytoplasmic transporter activity1.79e-021.00e+005.7941211
GO:0046827positive regulation of protein export from nucleus1.79e-021.00e+005.7941111
GO:0042307positive regulation of protein import into nucleus1.95e-021.00e+005.6681312
GO:0000132establishment of mitotic spindle orientation1.95e-021.00e+005.6681212
GO:0034399nuclear periphery1.95e-021.00e+005.6681312
GO:0035098ESC/E(Z) complex2.11e-021.00e+005.5531113
GO:0035861site of double-strand break2.11e-021.00e+005.5531113
GO:0070064proline-rich region binding2.27e-021.00e+005.4461114
GO:2000134negative regulation of G1/S transition of mitotic cell cycle2.43e-021.00e+005.3471215
GO:0005782peroxisomal matrix2.59e-021.00e+005.2531116
GO:0043022ribosome binding2.75e-021.00e+005.1661217
GO:0006611protein export from nucleus2.91e-021.00e+005.0831118
GO:0031047gene silencing by RNA2.91e-021.00e+005.0831218
GO:0006378mRNA polyadenylation2.91e-021.00e+005.0831318
GO:0032320positive regulation of Ras GTPase activity2.91e-021.00e+005.0831218
GO:0006306DNA methylation3.07e-021.00e+005.0051119
GO:0036464cytoplasmic ribonucleoprotein granule3.07e-021.00e+005.0051119
GO:0016071mRNA metabolic process3.08e-021.00e+002.844210170
GO:0015631tubulin binding3.23e-021.00e+004.9311120
GO:0034080CENP-A containing nucleosome assembly3.23e-021.00e+004.9311220
GO:0071902positive regulation of protein serine/threonine kinase activity3.23e-021.00e+004.9311220
GO:0010718positive regulation of epithelial to mesenchymal transition3.23e-021.00e+004.9311220
GO:0071346cellular response to interferon-gamma3.23e-021.00e+004.9311220
GO:0005720nuclear heterochromatin3.23e-021.00e+004.9311320
GO:0072686mitotic spindle3.23e-021.00e+004.9311220
GO:0034660ncRNA metabolic process3.23e-021.00e+004.9311120
GO:0031647regulation of protein stability3.39e-021.00e+004.8611221
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic3.39e-021.00e+004.8611221
GO:0006606protein import into nucleus3.55e-021.00e+004.7941322
GO:0000387spliceosomal snRNP assembly3.55e-021.00e+004.7941122
GO:0034605cellular response to heat3.55e-021.00e+004.7941122
GO:0000122negative regulation of transcription from RNA polymerase II promoter3.60e-021.00e+002.005329456
GO:0016070RNA metabolic process3.71e-021.00e+002.699210188
GO:00063707-methylguanosine mRNA capping3.86e-021.00e+004.6681524
GO:0005730nucleolus4.01e-021.00e+001.3265741217
GO:0010827regulation of glucose transport4.02e-021.00e+004.6101725
GO:0007094mitotic spindle assembly checkpoint4.02e-021.00e+004.6101425
GO:0000976transcription regulatory region sequence-specific DNA binding4.02e-021.00e+004.6101325
GO:0031072heat shock protein binding4.49e-021.00e+004.4461128
GO:0008094DNA-dependent ATPase activity4.65e-021.00e+004.3951629
GO:0008026ATP-dependent helicase activity4.65e-021.00e+004.3951329
GO:0005778peroxisomal membrane4.65e-021.00e+004.3951329
GO:0042752regulation of circadian rhythm4.65e-021.00e+004.3951529
GO:0006446regulation of translational initiation4.65e-021.00e+004.3951229
GO:0019898extrinsic component of membrane4.81e-021.00e+004.3471130
GO:0010212response to ionizing radiation4.81e-021.00e+004.3471330
GO:0005634nucleus4.90e-021.00e+000.75991583246
GO:0031490chromatin DNA binding4.96e-021.00e+004.2991131
GO:0007077mitotic nuclear envelope disassembly5.12e-021.00e+004.2531932
GO:0017148negative regulation of translation5.28e-021.00e+004.2091533
GO:0000786nucleosome5.43e-021.00e+004.1661234
GO:0050434positive regulation of viral transcription5.59e-021.00e+004.1241535
GO:0043406positive regulation of MAP kinase activity5.59e-021.00e+004.1241135
GO:0070301cellular response to hydrogen peroxide5.59e-021.00e+004.1241135
GO:0008645hexose transport5.74e-021.00e+004.0831836
GO:0003677DNA binding6.22e-021.00e+001.366452947
GO:0001047core promoter binding6.67e-021.00e+003.8611442
GO:0002039p53 binding7.13e-021.00e+003.7621445
GO:0015758glucose transport7.59e-021.00e+003.6681848
GO:0051301cell division7.74e-021.00e+003.6391249
GO:0005777peroxisome7.89e-021.00e+003.6101250
GO:0006334nucleosome assembly8.04e-021.00e+003.5811451
GO:0005643nuclear pore8.04e-021.00e+003.58111251
GO:0006368transcription elongation from RNA polymerase II promoter8.19e-021.00e+003.5531852
GO:0000776kinetochore8.65e-021.00e+003.4721855
GO:0006338chromatin remodeling8.65e-021.00e+003.4721755
GO:0005681spliceosomal complex8.65e-021.00e+003.4721855
GO:0003729mRNA binding8.95e-021.00e+003.4211457
GO:0000777condensed chromosome kinetochore8.95e-021.00e+003.4211657
GO:0000785chromatin9.25e-021.00e+003.3711659
GO:0045892negative regulation of transcription, DNA-templated9.35e-021.00e+001.945217317
GO:0007010cytoskeleton organization9.55e-021.00e+003.3231461
GO:0006366transcription from RNA polymerase II promoter1.06e-011.00e+001.840223341
GO:0008360regulation of cell shape1.09e-011.00e+003.1241370
GO:0006325chromatin organization1.09e-011.00e+003.1241470
GO:0008270zinc ion binding1.11e-011.00e+001.333339727
GO:0005737cytoplasm1.12e-011.00e+000.69871272633
GO:0016363nuclear matrix1.13e-011.00e+003.06411073
GO:0071456cellular response to hypoxia1.18e-011.00e+003.0051276
GO:0016605PML body1.22e-011.00e+002.9501579
GO:0042127regulation of cell proliferation1.23e-011.00e+002.9311480
GO:0005215transporter activity1.26e-011.00e+002.8961582
GO:0016020membrane1.26e-011.00e+001.0164561207
GO:0005635nuclear envelope1.28e-011.00e+002.8781683
GO:0044255cellular lipid metabolic process1.36e-011.00e+002.7781289
GO:0016477cell migration1.46e-011.00e+002.6681396
GO:0000790nuclear chromatin1.65e-011.00e+002.48519109
GO:0007049cell cycle1.73e-011.00e+002.40818115
GO:0003924GTPase activity1.78e-011.00e+002.35917119
GO:0016607nuclear speck1.82e-011.00e+002.32318122
GO:0000082G1/S transition of mitotic cell cycle1.86e-011.00e+002.28814125
GO:0031965nuclear membrane1.93e-011.00e+002.23118130
GO:0006184GTP catabolic process1.93e-011.00e+002.23117130
GO:0005622intracellular2.13e-011.00e+002.07312145
GO:0016874ligase activity2.14e-011.00e+002.064111146
GO:0007067mitotic nuclear division2.39e-011.00e+001.88719165
GO:0019221cytokine-mediated signaling pathway2.48e-011.00e+001.827110172
GO:0000166nucleotide binding2.53e-011.00e+001.794113176
GO:0006412translation2.55e-011.00e+001.778112178
GO:0004842ubiquitin-protein transferase activity2.56e-011.00e+001.770117179
GO:0005975carbohydrate metabolic process2.65e-011.00e+001.714110186
GO:0016567protein ubiquitination2.67e-011.00e+001.699114188
GO:0005525GTP binding2.78e-011.00e+001.631112197
GO:0006281DNA repair2.86e-011.00e+001.588124203
GO:0030154cell differentiation2.87e-011.00e+001.58115204
GO:0005739mitochondrion2.94e-011.00e+000.889232659
GO:0043231intracellular membrane-bounded organelle3.03e-011.00e+001.48518218
GO:0006200ATP catabolic process3.05e-011.00e+001.479113219
GO:0006355regulation of transcription, DNA-templated3.29e-011.00e+000.772231715
GO:0005829cytosol3.34e-011.00e+000.4504881787
GO:0046982protein heterodimerization activity3.56e-011.00e+001.204111265
GO:0043565sequence-specific DNA binding3.67e-011.00e+001.15018275
GO:0009986cell surface3.84e-011.00e+001.06915291
GO:0055114oxidation-reduction process4.01e-011.00e+000.98719308
GO:0044281small molecule metabolic process4.08e-011.00e+000.532235844
GO:0055085transmembrane transport4.22e-011.00e+000.891113329
GO:0005524ATP binding4.37e-011.00e+000.453237892
GO:0044267cellular protein metabolic process4.44e-011.00e+000.794114352
GO:0005783endoplasmic reticulum4.71e-011.00e+000.680112381
GO:0042803protein homodimerization activity5.12e-011.00e+000.512113428
GO:0006351transcription, DNA-templated5.40e-011.00e+000.1822471076
GO:0046872metal ion binding8.00e-011.00e+00-0.614124934
GO:0005886plasma membrane9.60e-011.00e+00-1.5471461784