Accession number | Name | Occurrences in all snw genes | Occurrences in all int/reg genes |
---|---|---|---|
GO:0044822 | poly(A) RNA binding | 45 | 799 |
Gene Symbol | Entrez Gene ID | Frequency | chia-screen-data-Fav gene score | Best subnetwork score | Degree | Transcription factor | Chia-Hits Primary | Chia-Hits Secondary |
---|---|---|---|---|---|---|---|---|
SYNCRIP | 10492 | 42 | -2.401 | 2.503 | 144 | TF | Yes | Yes |
NCBP1 | 4686 | 41 | -2.510 | 2.459 | 44 | - | Yes | Yes |
EIF2S2 | 8894 | 40 | -2.999 | 2.459 | 22 | - | Yes | Yes |
HNRNPU | 3192 | 39 | -2.869 | 2.644 | 33 | - | Yes | - |
ETF1 | 2107 | 35 | -2.829 | 2.503 | 6 | - | Yes | Yes |
GSPT1 | 2935 | 32 | -2.313 | 2.503 | 17 | - | Yes | Yes |
SFPQ | 6421 | 15 | -2.051 | 2.389 | 142 | TF | Yes | - |
NOLC1 | 9221 | 15 | -1.985 | 2.503 | 113 | TF | - | - |
FUS | 2521 | 11 | -1.980 | 2.414 | 53 | TF | - | - |
TPR | 7175 | 10 | -2.638 | 2.445 | 36 | TF | Yes | Yes |
H1FX | 8971 | 6 | -2.421 | 2.369 | 40 | TF | Yes | Yes |
FUBP1 | 8880 | 5 | -2.414 | 2.389 | 18 | TF | Yes | Yes |
REXO4 | 57109 | 5 | -1.743 | 2.287 | 95 | TF | - | - |
EIF2S1 | 1965 | 5 | -1.801 | 2.410 | 63 | TF | - | - |
CNOT1 | 23019 | 4 | -2.347 | 2.263 | 34 | - | Yes | - |
MATR3 | 9782 | 3 | -1.556 | 2.329 | 47 | TF | - | - |
SF3A2 | 8175 | 3 | -1.845 | 2.472 | 17 | TF | - | - |
PRPF40A | 55660 | 3 | -1.511 | 2.307 | 106 | TF | - | - |
SF3A1 | 10291 | 3 | -2.787 | 2.472 | 8 | - | Yes | Yes |
FIP1L1 | 81608 | 2 | -1.626 | 2.459 | 31 | - | - | - |
SYF2 | 25949 | 2 | -2.449 | 2.340 | 4 | - | Yes | - |
CAPRIN1 | 4076 | 2 | -1.934 | 2.240 | 42 | - | - | - |
DDX51 | 317781 | 2 | -1.151 | 2.281 | 180 | TF | - | - |
HSPD1 | 3329 | 2 | -1.852 | 2.369 | 39 | - | - | - |
TCF20 | 6942 | 1 | -1.825 | 2.207 | 112 | TF | - | - |
EIF1AX | 1964 | 1 | -1.385 | 2.259 | 43 | TF | - | - |
WDR6 | 11180 | 1 | -1.334 | 2.242 | 22 | TF | - | - |
NONO | 4841 | 1 | -1.232 | 2.203 | 223 | TF | - | - |
GRWD1 | 83743 | 1 | -1.200 | 2.194 | 3 | TF | - | - |
NUDT21 | 11051 | 1 | -1.273 | 2.307 | 61 | - | - | - |
ZNF598 | 90850 | 1 | -1.340 | 2.200 | 36 | TF | - | - |
PRPF31 | 26121 | 1 | -1.606 | 2.202 | 23 | - | - | - |
ZNF326 | 284695 | 1 | -1.535 | 2.380 | 24 | - | - | - |
CIRBP | 1153 | 1 | -1.342 | 2.386 | 41 | TF | - | - |
TRIM28 | 10155 | 1 | -1.234 | 2.210 | 190 | TF | - | - |
UBE2N | 7334 | 1 | -1.692 | 2.284 | 31 | - | - | - |
P4HB | 5034 | 1 | -1.450 | 2.298 | 12 | - | - | - |
CCT6A | 908 | 1 | -1.666 | 2.244 | 45 | - | - | - |
CCDC108 | 255101 | 1 | -1.719 | 2.207 | 19 | - | - | - |
TIA1 | 7072 | 1 | -1.234 | 2.263 | 53 | TF | - | - |
RBM25 | 58517 | 1 | -1.871 | 2.300 | 12 | TF | - | - |
CHERP | 10523 | 1 | -1.632 | 2.203 | 210 | TF | - | - |
PDAP1 | 11333 | 1 | -1.702 | 2.430 | 6 | - | - | - |
RBM19 | 9904 | 1 | -1.933 | 2.225 | 19 | TF | - | - |
YTHDC1 | 91746 | 1 | -1.232 | 2.300 | 3 | TF | - | - |
Subnetwork ID | chia-screen-data-Fav score | Size | Highlighted genes | Hypergeometric test | Corrected p-value | Enrichment ratio | Occurrences in subnetwork |
---|---|---|---|---|---|---|---|
reg-snw-8888 | 2.326 | 13 | 11 | 2.88e-01 | 1.00e+00 | 0.911 | 2 |
reg-snw-3832 | 2.189 | 15 | 11 | 2.93e-02 | 1.00e+00 | 1.704 | 4 |
reg-snw-23279 | 2.387 | 13 | 10 | 2.88e-01 | 1.00e+00 | 0.911 | 2 |
reg-snw-84455 | 2.239 | 14 | 9 | 2.29e-02 | 1.00e+00 | 1.804 | 4 |
reg-snw-10576 | 2.377 | 20 | 13 | 1.00e-04 | 9.80e-01 | 2.289 | 8 |
reg-snw-9732 | 2.379 | 12 | 9 | 1.29e-02 | 1.00e+00 | 2.026 | 4 |
reg-snw-9328 | 2.204 | 13 | 7 | 1.75e-02 | 1.00e+00 | 1.911 | 4 |
reg-snw-8396 | 2.246 | 8 | 5 | 1.35e-01 | 1.00e+00 | 1.611 | 2 |
reg-snw-8458 | 2.382 | 9 | 7 | 4.01e-03 | 1.00e+00 | 2.441 | 4 |
reg-snw-27130 | 2.286 | 18 | 13 | 1.26e-02 | 1.00e+00 | 1.763 | 5 |
reg-snw-1175 | 2.367 | 11 | 8 | 6.09e-01 | 1.00e+00 | 0.152 | 1 |
reg-snw-5434 | 2.644 | 7 | 7 | 4.50e-01 | 1.00e+00 | 0.804 | 1 |
reg-snw-284695 | 2.380 | 7 | 6 | 1.27e-03 | 1.00e+00 | 2.804 | 4 |
reg-snw-55153 | 2.231 | 17 | 12 | 9.76e-03 | 1.00e+00 | 1.846 | 5 |
reg-snw-7090 | 2.251 | 25 | 16 | 4.88e-02 | 1.00e+00 | 1.289 | 5 |
reg-snw-908 | 2.244 | 11 | 8 | 9.51e-05 | 9.28e-01 | 2.737 | 6 |
reg-snw-84948 | 2.194 | 5 | 3 | 3.47e-01 | 1.00e+00 | 1.289 | 1 |
reg-snw-11051 | 2.307 | 25 | 17 | 1.33e-05 | 1.30e-01 | 2.289 | 10 |
reg-snw-27338 | 2.342 | 19 | 13 | 1.60e-02 | 1.00e+00 | 1.685 | 5 |
reg-snw-2551 | 2.238 | 10 | 7 | 1.95e-01 | 1.00e+00 | 1.289 | 2 |
reg-snw-9650 | 2.380 | 15 | 13 | 3.51e-01 | 1.00e+00 | 0.704 | 2 |
reg-snw-5425 | 2.393 | 9 | 6 | 5.36e-01 | 1.00e+00 | 0.441 | 1 |
reg-snw-4221 | 2.240 | 13 | 9 | 2.88e-01 | 1.00e+00 | 0.911 | 2 |
reg-snw-79872 | 2.445 | 6 | 5 | 8.04e-02 | 1.00e+00 | 2.026 | 2 |
reg-snw-90850 | 2.200 | 12 | 6 | 6.88e-02 | 1.00e+00 | 1.611 | 3 |
reg-snw-2783 | 2.192 | 16 | 9 | 1.38e-01 | 1.00e+00 | 1.196 | 3 |
reg-snw-5347 | 2.228 | 7 | 6 | 4.50e-01 | 1.00e+00 | 0.804 | 1 |
reg-snw-9782 | 2.329 | 9 | 6 | 4.01e-03 | 1.00e+00 | 2.441 | 4 |
reg-snw-4927 | 2.292 | 10 | 6 | 1.95e-01 | 1.00e+00 | 1.289 | 2 |
reg-snw-91746 | 2.300 | 13 | 10 | 1.75e-02 | 1.00e+00 | 1.911 | 4 |
reg-snw-51566 | 2.348 | 8 | 6 | 4.95e-01 | 1.00e+00 | 0.611 | 1 |
reg-snw-9442 | 2.229 | 15 | 10 | 5.43e-03 | 1.00e+00 | 2.026 | 5 |
reg-snw-3735 | 2.341 | 8 | 5 | 1.35e-01 | 1.00e+00 | 1.611 | 2 |
reg-snw-23568 | 2.248 | 6 | 5 | 4.01e-01 | 1.00e+00 | 1.026 | 1 |
reg-snw-2314 | 2.213 | 10 | 9 | 1.95e-01 | 1.00e+00 | 1.289 | 2 |
reg-snw-191 | 2.287 | 20 | 14 | 1.99e-02 | 1.00e+00 | 1.611 | 5 |
reg-snw-26263 | 2.369 | 14 | 10 | 1.01e-01 | 1.00e+00 | 1.389 | 3 |
reg-snw-9631 | 2.312 | 20 | 15 | 4.96e-01 | 1.00e+00 | 0.289 | 2 |
reg-snw-90480 | 2.431 | 8 | 7 | 4.95e-01 | 1.00e+00 | 0.611 | 1 |
reg-snw-11180 | 2.242 | 17 | 11 | 9.76e-03 | 1.00e+00 | 1.846 | 5 |
reg-snw-128637 | 2.303 | 5 | 3 | 3.47e-01 | 1.00e+00 | 1.289 | 1 |
reg-snw-57541 | 2.192 | 14 | 9 | 6.98e-01 | 1.00e+00 | -0.196 | 1 |
reg-snw-137695 | 2.215 | 8 | 5 | 1.35e-01 | 1.00e+00 | 1.611 | 2 |
reg-snw-150962 | 2.255 | 13 | 10 | 8.42e-02 | 1.00e+00 | 1.496 | 3 |
reg-snw-25996 | 2.217 | 21 | 16 | 5.22e-01 | 1.00e+00 | 0.219 | 2 |
reg-snw-8562 | 2.263 | 32 | 24 | 1.55e-04 | 1.00e+00 | 1.933 | 10 |
reg-snw-7596 | 2.279 | 16 | 11 | 1.38e-01 | 1.00e+00 | 1.196 | 3 |
reg-snw-64146 | 2.308 | 12 | 8 | 6.88e-02 | 1.00e+00 | 1.611 | 3 |
reg-snw-6051 | 2.223 | 15 | 9 | 7.22e-01 | 1.00e+00 | -0.296 | 1 |
reg-snw-10055 | 2.386 | 18 | 13 | 5.41e-02 | 1.00e+00 | 1.441 | 4 |
reg-snw-9063 | 2.308 | 16 | 10 | 3.81e-01 | 1.00e+00 | 0.611 | 2 |
reg-snw-9477 | 2.503 | 10 | 8 | 6.26e-03 | 1.00e+00 | 2.289 | 4 |
reg-snw-51060 | 2.225 | 29 | 24 | 2.75e-02 | 1.00e+00 | 1.338 | 6 |
reg-snw-708 | 2.200 | 33 | 23 | 1.28e-01 | 1.00e+00 | 0.889 | 5 |
reg-snw-7334 | 2.284 | 9 | 7 | 3.15e-02 | 1.00e+00 | 2.026 | 3 |
reg-snw-5471 | 2.239 | 28 | 22 | 6.16e-03 | 1.00e+00 | 1.611 | 7 |
reg-snw-10914 | 2.455 | 5 | 4 | 5.66e-02 | 1.00e+00 | 2.289 | 2 |
reg-snw-6840 | 2.369 | 5 | 5 | 3.47e-01 | 1.00e+00 | 1.289 | 1 |
reg-snw-79711 | 2.449 | 5 | 4 | 3.47e-01 | 1.00e+00 | 1.289 | 1 |
reg-snw-9330 | 2.428 | 11 | 8 | 9.20e-03 | 1.00e+00 | 2.152 | 4 |
reg-snw-80830 | 2.230 | 19 | 11 | 4.68e-01 | 1.00e+00 | 0.363 | 2 |
reg-snw-22948 | 2.389 | 17 | 13 | 4.48e-02 | 1.00e+00 | 1.524 | 4 |
reg-snw-7543 | 2.200 | 20 | 13 | 7.53e-02 | 1.00e+00 | 1.289 | 4 |
reg-snw-4781 | 2.202 | 8 | 5 | 1.35e-01 | 1.00e+00 | 1.611 | 2 |
reg-snw-5799 | 2.281 | 13 | 11 | 2.88e-01 | 1.00e+00 | 0.911 | 2 |
reg-snw-10767 | 2.276 | 18 | 12 | 1.78e-01 | 1.00e+00 | 1.026 | 3 |
reg-snw-81608 | 2.459 | 12 | 10 | 6.88e-02 | 1.00e+00 | 1.611 | 3 |
reg-snw-345611 | 2.344 | 5 | 4 | 3.47e-01 | 1.00e+00 | 1.289 | 1 |
reg-snw-28985 | 2.410 | 19 | 16 | 3.16e-03 | 1.00e+00 | 1.948 | 6 |
reg-snw-5889 | 2.212 | 27 | 21 | 6.48e-02 | 1.00e+00 | 1.178 | 5 |
reg-snw-8624 | 2.286 | 24 | 20 | 4.17e-02 | 1.00e+00 | 1.348 | 5 |
reg-snw-7355 | 2.338 | 18 | 14 | 1.78e-01 | 1.00e+00 | 1.026 | 3 |
reg-snw-1153 | 2.386 | 12 | 9 | 1.29e-02 | 1.00e+00 | 2.026 | 4 |
reg-snw-6790 | 2.315 | 19 | 15 | 4.68e-01 | 1.00e+00 | 0.363 | 2 |
reg-snw-2902 | 2.207 | 6 | 3 | 4.01e-01 | 1.00e+00 | 1.026 | 1 |
reg-snw-11333 | 2.430 | 10 | 9 | 1.95e-01 | 1.00e+00 | 1.289 | 2 |
reg-snw-2624 | 2.234 | 6 | 5 | 4.01e-01 | 1.00e+00 | 1.026 | 1 |
reg-snw-80153 | 2.203 | 32 | 22 | 7.88e-04 | 1.00e+00 | 1.781 | 9 |
reg-snw-55611 | 2.268 | 9 | 7 | 5.36e-01 | 1.00e+00 | 0.441 | 1 |
reg-snw-54471 | 2.203 | 7 | 5 | 1.07e-01 | 1.00e+00 | 1.804 | 2 |
reg-snw-6046 | 2.210 | 13 | 9 | 2.88e-01 | 1.00e+00 | 0.911 | 2 |
reg-snw-83998 | 2.204 | 14 | 9 | 6.98e-01 | 1.00e+00 | -0.196 | 1 |
reg-snw-10362 | 2.239 | 13 | 8 | 6.71e-01 | 1.00e+00 | -0.089 | 1 |
reg-snw-2744 | 2.207 | 9 | 5 | 1.64e-01 | 1.00e+00 | 1.441 | 2 |
reg-snw-6833 | 2.197 | 7 | 6 | 4.50e-01 | 1.00e+00 | 0.804 | 1 |
reg-snw-6874 | 2.285 | 17 | 13 | 4.48e-02 | 1.00e+00 | 1.524 | 4 |
reg-snw-5905 | 2.303 | 13 | 8 | 8.42e-02 | 1.00e+00 | 1.496 | 3 |
reg-snw-5605 | 2.472 | 8 | 6 | 2.24e-02 | 1.00e+00 | 2.196 | 3 |
reg-snw-83990 | 2.201 | 19 | 11 | 2.00e-01 | 1.00e+00 | 0.948 | 3 |
reg-snw-2733 | 2.414 | 11 | 8 | 2.26e-01 | 1.00e+00 | 1.152 | 2 |
reg-snw-26121 | 2.202 | 9 | 5 | 4.01e-03 | 1.00e+00 | 2.441 | 4 |
reg-snw-1371 | 2.264 | 7 | 5 | 1.07e-01 | 1.00e+00 | 1.804 | 2 |
reg-snw-1062 | 2.228 | 15 | 12 | 1.19e-01 | 1.00e+00 | 1.289 | 3 |
reg-snw-5682 | 2.230 | 13 | 8 | 8.42e-02 | 1.00e+00 | 1.496 | 3 |
reg-snw-23780 | 2.223 | 24 | 16 | 1.28e-01 | 1.00e+00 | 1.026 | 4 |
reg-snw-3145 | 2.226 | 23 | 17 | 1.14e-01 | 1.00e+00 | 1.088 | 4 |
reg-snw-1111 | 2.288 | 22 | 16 | 5.48e-01 | 1.00e+00 | 0.152 | 2 |
reg-snw-23310 | 2.232 | 10 | 7 | 1.95e-01 | 1.00e+00 | 1.289 | 2 |
reg-snw-23658 | 2.259 | 19 | 13 | 2.00e-01 | 1.00e+00 | 0.948 | 3 |
reg-snw-84108 | 2.199 | 30 | 22 | 4.50e-01 | 1.00e+00 | 0.289 | 3 |
reg-snw-6595 | 2.241 | 15 | 10 | 1.19e-01 | 1.00e+00 | 1.289 | 3 |
reg-snw-23254 | 2.340 | 6 | 4 | 4.01e-01 | 1.00e+00 | 1.026 | 1 |
reg-snw-7511 | 2.345 | 12 | 9 | 6.41e-01 | 1.00e+00 | 0.026 | 1 |
reg-snw-10617 | 2.212 | 15 | 10 | 1.19e-01 | 1.00e+00 | 1.289 | 3 |
reg-snw-10196 | 2.454 | 5 | 4 | 5.66e-02 | 1.00e+00 | 2.289 | 2 |
reg-snw-151246 | 2.200 | 16 | 11 | 1.42e-04 | 1.00e+00 | 2.419 | 7 |
reg-snw-54920 | 2.249 | 7 | 5 | 1.07e-01 | 1.00e+00 | 1.804 | 2 |
reg-snw-5034 | 2.298 | 13 | 9 | 8.42e-02 | 1.00e+00 | 1.496 | 3 |
reg-snw-339175 | 2.192 | 23 | 15 | 3.53e-02 | 1.00e+00 | 1.410 | 5 |
reg-snw-1452 | 2.207 | 7 | 5 | 1.49e-02 | 1.00e+00 | 2.389 | 3 |
reg-snw-84320 | 2.274 | 23 | 16 | 1.83e-03 | 1.00e+00 | 1.895 | 7 |
reg-snw-2335 | 2.280 | 7 | 4 | 1.07e-01 | 1.00e+00 | 1.804 | 2 |