reg-snw-79872

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.445	1.35e-08	8.43e-03	7.48e-03

chia-screen-data-Fav-reg-snw-79872 subnetwork

Genes (6)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
[ CBLL1 ]	79872	9	-1.897	2.445	38	TF	-	-
TPR	7175	10	-2.638	2.445	36	TF	Yes	Yes
NCBP1	4686	41	-2.510	2.459	44	-	Yes	Yes
SLC7A5P1	81893	4	-3.217	2.445	4	-	Yes	-
MED28	80306	8	-2.404	2.445	6	-	Yes	-
CASP2	835	4	-2.007	2.445	47	TF	Yes	-

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
CASP2	835	SLC7A5P1	81893	pd	>	reg.ITFP.txt: no annot
CBLL1	79872	MED28	80306	pd	>	reg.ITFP.txt: no annot
NCBP1	4686	CBLL1	79872	pd	<	reg.ITFP.txt: no annot
CASP2	835	CBLL1	79872	pd	<>	reg.ITFP.txt: no annot
NCBP1	4686	TPR	7175	pd	<	reg.ITFP.txt: no annot

Related GO terms (134)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:1901673	regulation of spindle assembly involved in mitosis	6.14e-04	1.00e+00	10.668	1	1	1
GO:0043578	nuclear matrix organization	6.14e-04	1.00e+00	10.668	1	1	1
GO:0010965	regulation of mitotic sister chromatid separation	6.14e-04	1.00e+00	10.668	1	1	1
GO:0006404	RNA import into nucleus	6.14e-04	1.00e+00	10.668	1	1	1
GO:0031453	positive regulation of heterochromatin assembly	6.14e-04	1.00e+00	10.668	1	1	1
GO:0001554	luteolysis	6.14e-04	1.00e+00	10.668	1	1	1
GO:0000189	MAPK import into nucleus	1.23e-03	1.00e+00	9.668	1	1	2
GO:0031990	mRNA export from nucleus in response to heat stress	1.23e-03	1.00e+00	9.668	1	1	2
GO:0042306	regulation of protein import into nucleus	1.23e-03	1.00e+00	9.668	1	1	2
GO:0005846	nuclear cap binding complex	1.23e-03	1.00e+00	9.668	1	1	2
GO:0070840	dynein complex binding	1.23e-03	1.00e+00	9.668	1	1	2
GO:0046832	negative regulation of RNA export from nucleus	1.23e-03	1.00e+00	9.668	1	1	2
GO:0006405	RNA export from nucleus	1.84e-03	1.00e+00	9.083	1	1	3
GO:0010793	regulation of mRNA export from nucleus	1.84e-03	1.00e+00	9.083	1	1	3
GO:0003407	neural retina development	2.46e-03	1.00e+00	8.668	1	2	4
GO:0051151	negative regulation of smooth muscle cell differentiation	2.46e-03	1.00e+00	8.668	1	1	4
GO:0045292	mRNA cis splicing, via spliceosome	2.46e-03	1.00e+00	8.668	1	1	4
GO:0031442	positive regulation of mRNA 3'-end processing	2.46e-03	1.00e+00	8.668	1	1	4
GO:0006999	nuclear pore organization	2.46e-03	1.00e+00	8.668	1	1	4
GO:0070849	response to epidermal growth factor	2.46e-03	1.00e+00	8.668	1	1	4
GO:0044615	nuclear pore nuclear basket	2.46e-03	1.00e+00	8.668	1	1	4
GO:0097153	cysteine-type endopeptidase activity involved in apoptotic process	3.07e-03	1.00e+00	8.347	1	1	5
GO:0046825	regulation of protein export from nucleus	3.07e-03	1.00e+00	8.347	1	1	5
GO:0043495	protein anchor	3.07e-03	1.00e+00	8.347	1	1	5
GO:0090267	positive regulation of mitotic cell cycle spindle assembly checkpoint	3.68e-03	1.00e+00	8.083	1	1	6
GO:0035234	ectopic germ cell programmed cell death	3.68e-03	1.00e+00	8.083	1	1	6
GO:0000339	RNA cap binding	4.29e-03	1.00e+00	7.861	1	1	7
GO:0005868	cytoplasmic dynein complex	4.29e-03	1.00e+00	7.861	1	1	7
GO:0043281	regulation of cysteine-type endopeptidase activity involved in apoptotic process	4.29e-03	1.00e+00	7.861	1	1	7
GO:0005845	mRNA cap binding complex	4.91e-03	1.00e+00	7.668	1	1	8
GO:0042405	nuclear inclusion body	4.91e-03	1.00e+00	7.668	1	1	8
GO:0051292	nuclear pore complex assembly	4.91e-03	1.00e+00	7.668	1	4	8
GO:0035457	cellular response to interferon-alpha	4.91e-03	1.00e+00	7.668	1	1	8
GO:0006379	mRNA cleavage	5.52e-03	1.00e+00	7.499	1	2	9
GO:0045947	negative regulation of translational initiation	5.52e-03	1.00e+00	7.499	1	1	9
GO:0051019	mitogen-activated protein kinase binding	6.74e-03	1.00e+00	7.209	1	1	11
GO:0008334	histone mRNA metabolic process	6.74e-03	1.00e+00	7.209	1	1	11
GO:0090316	positive regulation of intracellular protein transport	6.74e-03	1.00e+00	7.209	1	1	11
GO:0045807	positive regulation of endocytosis	6.74e-03	1.00e+00	7.209	1	1	11
GO:0005487	nucleocytoplasmic transporter activity	6.74e-03	1.00e+00	7.209	1	2	11
GO:0046827	positive regulation of protein export from nucleus	6.74e-03	1.00e+00	7.209	1	1	11
GO:0042307	positive regulation of protein import into nucleus	7.35e-03	1.00e+00	7.083	1	3	12
GO:0034399	nuclear periphery	7.35e-03	1.00e+00	7.083	1	3	12
GO:0097194	execution phase of apoptosis	9.18e-03	1.00e+00	6.762	1	1	15
GO:0030864	cortical actin cytoskeleton	9.79e-03	1.00e+00	6.668	1	1	16
GO:0016485	protein processing	9.79e-03	1.00e+00	6.668	1	1	16
GO:0006611	protein export from nucleus	1.10e-02	1.00e+00	6.499	1	1	18
GO:0031047	gene silencing by RNA	1.10e-02	1.00e+00	6.499	1	2	18
GO:2001235	positive regulation of apoptotic signaling pathway	1.16e-02	1.00e+00	6.421	1	2	19
GO:0015631	tubulin binding	1.22e-02	1.00e+00	6.347	1	1	20
GO:0072686	mitotic spindle	1.22e-02	1.00e+00	6.347	1	2	20
GO:0034660	ncRNA metabolic process	1.22e-02	1.00e+00	6.347	1	1	20
GO:0031647	regulation of protein stability	1.28e-02	1.00e+00	6.276	1	2	21
GO:0006606	protein import into nucleus	1.34e-02	1.00e+00	6.209	1	3	22
GO:0000387	spliceosomal snRNP assembly	1.34e-02	1.00e+00	6.209	1	1	22
GO:0034605	cellular response to heat	1.34e-02	1.00e+00	6.209	1	1	22
GO:0007162	negative regulation of cell adhesion	1.47e-02	1.00e+00	6.083	1	2	24
GO:0006370	7-methylguanosine mRNA capping	1.47e-02	1.00e+00	6.083	1	5	24
GO:0016592	mediator complex	1.53e-02	1.00e+00	6.025	1	6	25
GO:0010827	regulation of glucose transport	1.53e-02	1.00e+00	6.025	1	7	25
GO:0007094	mitotic spindle assembly checkpoint	1.53e-02	1.00e+00	6.025	1	4	25
GO:0031072	heat shock protein binding	1.71e-02	1.00e+00	5.861	1	1	28
GO:0006446	regulation of translational initiation	1.77e-02	1.00e+00	5.810	1	2	29
GO:0019898	extrinsic component of membrane	1.83e-02	1.00e+00	5.762	1	1	30
GO:0097192	extrinsic apoptotic signaling pathway in absence of ligand	1.89e-02	1.00e+00	5.714	1	1	31
GO:0007077	mitotic nuclear envelope disassembly	1.95e-02	1.00e+00	5.668	1	9	32
GO:0050434	positive regulation of viral transcription	2.13e-02	1.00e+00	5.539	1	5	35
GO:0031124	mRNA 3'-end processing	2.13e-02	1.00e+00	5.539	1	4	35
GO:0008645	hexose transport	2.19e-02	1.00e+00	5.499	1	8	36
GO:0004197	cysteine-type endopeptidase activity	2.25e-02	1.00e+00	5.459	1	1	37
GO:0006369	termination of RNA polymerase II transcription	2.31e-02	1.00e+00	5.421	1	5	38
GO:0019827	stem cell maintenance	2.37e-02	1.00e+00	5.383	1	4	39
GO:0043525	positive regulation of neuron apoptotic process	2.49e-02	1.00e+00	5.311	1	1	41
GO:0008630	intrinsic apoptotic signaling pathway in response to DNA damage	2.55e-02	1.00e+00	5.276	1	2	42
GO:0016032	viral process	2.56e-02	1.00e+00	2.927	2	30	428
GO:0006406	mRNA export from nucleus	2.67e-02	1.00e+00	5.209	1	7	44
GO:0015758	glucose transport	2.91e-02	1.00e+00	5.083	1	8	48
GO:0000151	ubiquitin ligase complex	2.91e-02	1.00e+00	5.083	1	4	48
GO:0005643	nuclear pore	3.09e-02	1.00e+00	4.996	1	12	51
GO:0006368	transcription elongation from RNA polymerase II promoter	3.15e-02	1.00e+00	4.968	1	8	52
GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	3.21e-02	1.00e+00	4.941	1	3	53
GO:0000776	kinetochore	3.33e-02	1.00e+00	4.887	1	8	55
GO:0071260	cellular response to mechanical stimulus	3.33e-02	1.00e+00	4.887	1	2	55
GO:0003729	mRNA binding	3.45e-02	1.00e+00	4.836	1	4	57
GO:0016337	single organismal cell-cell adhesion	3.75e-02	1.00e+00	4.714	1	3	62
GO:0030529	ribonucleoprotein complex	4.94e-02	1.00e+00	4.311	1	5	82
GO:0005215	transporter activity	4.94e-02	1.00e+00	4.311	1	5	82
GO:0097190	apoptotic signaling pathway	4.99e-02	1.00e+00	4.293	1	1	83
GO:0005635	nuclear envelope	4.99e-02	1.00e+00	4.293	1	6	83
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	5.05e-02	1.00e+00	4.276	1	5	84
GO:0005515	protein binding	5.22e-02	1.00e+00	0.981	5	198	4124
GO:0005739	mitochondrion	5.69e-02	1.00e+00	2.304	2	32	659
GO:0007568	aging	5.82e-02	1.00e+00	4.069	1	3	97
GO:0030335	positive regulation of cell migration	6.05e-02	1.00e+00	4.010	1	2	101
GO:0007420	brain development	7.09e-02	1.00e+00	3.774	1	3	119
GO:0000398	mRNA splicing, via spliceosome	7.61e-02	1.00e+00	3.668	1	15	128
GO:0031965	nuclear membrane	7.73e-02	1.00e+00	3.646	1	8	130
GO:0019904	protein domain specific binding	7.73e-02	1.00e+00	3.646	1	4	130
GO:0044822	poly(A) RNA binding	8.04e-02	1.00e+00	2.026	2	45	799
GO:0016874	ligase activity	8.64e-02	1.00e+00	3.479	1	11	146
GO:0005654	nucleoplasm	9.46e-02	1.00e+00	1.894	2	68	876
GO:0008380	RNA splicing	9.72e-02	1.00e+00	3.302	1	21	165
GO:0007067	mitotic nuclear division	9.72e-02	1.00e+00	3.302	1	9	165
GO:0016071	mRNA metabolic process	1.00e-01	1.00e+00	3.259	1	10	170
GO:0019221	cytokine-mediated signaling pathway	1.01e-01	1.00e+00	3.242	1	10	172
GO:0004842	ubiquitin-protein transferase activity	1.05e-01	1.00e+00	3.185	1	17	179
GO:0003779	actin binding	1.05e-01	1.00e+00	3.185	1	3	179
GO:0005975	carbohydrate metabolic process	1.09e-01	1.00e+00	3.129	1	10	186
GO:0016567	protein ubiquitination	1.10e-01	1.00e+00	3.114	1	14	188
GO:0016070	RNA metabolic process	1.10e-01	1.00e+00	3.114	1	10	188
GO:0048011	neurotrophin TRK receptor signaling pathway	1.16e-01	1.00e+00	3.032	1	8	199
GO:0043065	positive regulation of apoptotic process	1.18e-01	1.00e+00	3.010	1	7	202
GO:0019899	enzyme binding	1.22e-01	1.00e+00	2.954	1	7	210
GO:0003723	RNA binding	1.43e-01	1.00e+00	2.720	1	22	247
GO:0003682	chromatin binding	1.45e-01	1.00e+00	2.691	1	15	252
GO:0006508	proteolysis	1.52e-01	1.00e+00	2.624	1	11	264
GO:0016020	membrane	1.63e-01	1.00e+00	1.431	2	56	1207
GO:0000278	mitotic cell cycle	1.78e-01	1.00e+00	2.374	1	28	314
GO:0055085	transmembrane transport	1.86e-01	1.00e+00	2.306	1	13	329
GO:0006366	transcription from RNA polymerase II promoter	1.92e-01	1.00e+00	2.255	1	23	341
GO:0042802	identical protein binding	1.99e-01	1.00e+00	2.201	1	15	354
GO:0005737	cytoplasm	2.02e-01	1.00e+00	0.891	3	127	2633
GO:0006915	apoptotic process	2.27e-01	1.00e+00	1.985	1	15	411
GO:0042803	protein homodimerization activity	2.36e-01	1.00e+00	1.927	1	13	428
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	2.49e-01	1.00e+00	1.836	1	29	456
GO:0010467	gene expression	2.87e-01	1.00e+00	1.605	1	49	535
GO:0005829	cytosol	3.03e-01	1.00e+00	0.865	2	88	1787
GO:0005634	nucleus	3.18e-01	1.00e+00	0.589	3	158	3246
GO:0006355	regulation of transcription, DNA-templated	3.66e-01	1.00e+00	1.187	1	31	715
GO:0008270	zinc ion binding	3.71e-01	1.00e+00	1.163	1	39	727
GO:0044281	small molecule metabolic process	4.19e-01	1.00e+00	0.947	1	35	844
GO:0006351	transcription, DNA-templated	5.04e-01	1.00e+00	0.597	1	47	1076
GO:0005730	nucleolus	5.50e-01	1.00e+00	0.419	1	74	1217
GO:0005886	plasma membrane	7.02e-01	1.00e+00	-0.132	1	46	1784

chia-Fav

reg-snw-79872

Statistics

Genes (6)

Interactions (5)

Related GO terms (134)