GO:0006368

transcription elongation from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0006368transcription elongation from RNA polymerase II promoter852

Term information on AmiGO 2: GO:0006368

Genes (8)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Transcription factor Chia-Hits Primary Chia-Hits Secondary
NCBP1 4686 41-2.5102.45944-YesYes
POLR2E 5434 30-2.0372.644201TFYes-
GTF2A2 2958 9-1.9382.37741TF--
POLR2H 5437 2-1.9602.20414---
POLR2L 5441 1-1.9722.33517TF--
ERCC2 2068 1-1.4212.37912TF--
TAF4 6874 1-0.9542.2854TF--
TAF12 6883 1-2.1342.2345-Yes-

Subnetworks (69)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
reg-snw-8888 2.326 13 11 6.71e-02 1.00e+00 3.853 1
reg-snw-23279 2.387 13 10 6.71e-02 1.00e+00 3.853 1
reg-snw-10576 2.377 20 13 4.97e-03 1.00e+00 4.231 2
reg-snw-9328 2.204 13 7 6.71e-02 1.00e+00 3.853 1
reg-snw-8396 2.246 8 5 4.18e-02 1.00e+00 4.553 1
reg-snw-8458 2.382 9 7 4.69e-02 1.00e+00 4.383 1
reg-snw-27130 2.286 18 13 9.17e-02 1.00e+00 3.383 1
reg-snw-1175 2.367 11 8 1.48e-03 1.00e+00 5.094 2
reg-snw-5434 2.644 7 7 3.67e-02 1.00e+00 4.746 1
reg-snw-55153 2.231 17 12 8.68e-02 1.00e+00 3.466 1
reg-snw-7090 2.251 25 16 7.72e-03 1.00e+00 3.909 2
reg-snw-11051 2.307 25 17 1.25e-01 1.00e+00 2.909 1
reg-snw-27338 2.342 19 13 4.49e-03 1.00e+00 4.305 2
reg-snw-9650 2.380 15 13 2.79e-03 1.00e+00 4.646 2
reg-snw-4221 2.240 13 9 6.71e-02 1.00e+00 3.853 1
reg-snw-79872 2.445 6 5 3.15e-02 1.00e+00 4.968 1
reg-snw-2783 2.192 16 9 3.18e-03 1.00e+00 4.553 2
reg-snw-91746 2.300 13 10 6.71e-02 1.00e+00 3.853 1
reg-snw-2314 2.213 10 9 5.20e-02 1.00e+00 4.231 1
reg-snw-191 2.287 20 14 1.01e-01 1.00e+00 3.231 1
reg-snw-26263 2.369 14 10 7.21e-02 1.00e+00 3.746 1
reg-snw-9631 2.312 20 15 1.01e-01 1.00e+00 3.231 1
reg-snw-90480 2.431 8 7 4.18e-02 1.00e+00 4.553 1
reg-snw-11180 2.242 17 11 8.68e-02 1.00e+00 3.466 1
reg-snw-25996 2.217 21 16 1.06e-01 1.00e+00 3.161 1
reg-snw-8562 2.263 32 24 1.57e-01 1.00e+00 2.553 1
reg-snw-7596 2.279 16 11 8.19e-02 1.00e+00 3.553 1
reg-snw-6051 2.223 15 9 2.79e-03 1.00e+00 4.646 2
reg-snw-10055 2.386 18 13 4.03e-03 1.00e+00 4.383 2
reg-snw-9063 2.308 16 10 8.19e-02 1.00e+00 3.553 1
reg-snw-708 2.200 33 23 1.62e-01 1.00e+00 2.509 1
reg-snw-7334 2.284 9 7 9.78e-04 1.00e+00 5.383 2
reg-snw-5471 2.239 28 22 9.62e-03 1.00e+00 3.746 2
reg-snw-2068 2.379 6 4 3.15e-02 1.00e+00 4.968 1
reg-snw-80830 2.230 19 11 9.66e-02 1.00e+00 3.305 1
reg-snw-22948 2.389 17 13 8.68e-02 1.00e+00 3.466 1
reg-snw-7543 2.200 20 13 1.01e-01 1.00e+00 3.231 1
reg-snw-81608 2.459 12 10 6.21e-02 1.00e+00 3.968 1
reg-snw-28985 2.410 19 16 9.66e-02 1.00e+00 3.305 1
reg-snw-5889 2.212 27 21 1.34e-01 1.00e+00 2.798 1
reg-snw-8624 2.286 24 20 7.12e-03 1.00e+00 3.968 2
reg-snw-7355 2.338 18 14 4.03e-03 1.00e+00 4.383 2
reg-snw-6790 2.315 19 15 9.66e-02 1.00e+00 3.305 1
reg-snw-11333 2.430 10 9 5.20e-02 1.00e+00 4.231 1
reg-snw-2624 2.234 6 5 3.15e-02 1.00e+00 4.968 1
reg-snw-80153 2.203 32 22 1.57e-01 1.00e+00 2.553 1
reg-snw-55611 2.268 9 7 4.69e-02 1.00e+00 4.383 1
reg-snw-54471 2.203 7 5 3.67e-02 1.00e+00 4.746 1
reg-snw-83998 2.204 14 9 7.21e-02 1.00e+00 3.746 1
reg-snw-10362 2.239 13 8 2.09e-03 1.00e+00 4.853 2
reg-snw-6874 2.285 17 13 9.19e-05 8.97e-01 5.050 3
reg-snw-5905 2.303 13 8 6.71e-02 1.00e+00 3.853 1
reg-snw-5605 2.472 8 6 4.18e-02 1.00e+00 4.553 1
reg-snw-83990 2.201 19 11 9.66e-02 1.00e+00 3.305 1
reg-snw-2733 2.414 11 8 5.71e-02 1.00e+00 4.094 1
reg-snw-26121 2.202 9 5 4.69e-02 1.00e+00 4.383 1
reg-snw-5682 2.230 13 8 2.09e-03 1.00e+00 4.853 2
reg-snw-23780 2.223 24 16 1.20e-01 1.00e+00 2.968 1
reg-snw-3145 2.226 23 17 1.16e-01 1.00e+00 3.029 1
reg-snw-1111 2.288 22 16 1.11e-01 1.00e+00 3.094 1
reg-snw-23658 2.259 19 13 9.66e-02 1.00e+00 3.305 1
reg-snw-84108 2.199 30 22 1.48e-01 1.00e+00 2.646 1
reg-snw-9921 2.335 6 3 3.15e-02 1.00e+00 4.968 1
reg-snw-6595 2.241 15 10 7.70e-02 1.00e+00 3.646 1
reg-snw-7511 2.345 12 9 6.21e-02 1.00e+00 3.968 1
reg-snw-151246 2.200 16 11 8.19e-02 1.00e+00 3.553 1
reg-snw-5034 2.298 13 9 6.71e-02 1.00e+00 3.853 1
reg-snw-339175 2.192 23 15 6.55e-03 1.00e+00 4.029 2
reg-snw-84320 2.274 23 16 1.16e-01 1.00e+00 3.029 1