Chia-study-screening

Genes (1)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
POLR2E	5434	30	-2.037	2.644	201	TF	Yes	-

Subnetwork ID	chia-screen-data-Fav score	Size	Highlighted genes
reg-snw-8888	2.326	13	11
reg-snw-1175	2.367	11	8
reg-snw-5434	2.644	7	7
reg-snw-9650	2.380	15	13
reg-snw-4221	2.240	13	9
reg-snw-2783	2.192	16	9
reg-snw-91746	2.300	13	10
reg-snw-2314	2.213	10	9
reg-snw-90480	2.431	8	7
reg-snw-11180	2.242	17	11
reg-snw-6051	2.223	15	9
reg-snw-10055	2.386	18	13
reg-snw-7334	2.284	9	7
reg-snw-5471	2.239	28	22
reg-snw-8624	2.286	24	20
reg-snw-7355	2.338	18	14
reg-snw-11333	2.430	10	9
reg-snw-55611	2.268	9	7
reg-snw-83998	2.204	14	9
reg-snw-10362	2.239	13	8
reg-snw-6874	2.285	17	13
reg-snw-5905	2.303	13	8
reg-snw-5605	2.472	8	6
reg-snw-2733	2.414	11	8
reg-snw-5682	2.230	13	8
reg-snw-3145	2.226	23	17
reg-snw-6595	2.241	15	10
reg-snw-7511	2.345	12	9
reg-snw-5034	2.298	13	9
reg-snw-339175	2.192	23	15

Accession number	Name	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0006283	transcription-coupled nucleotide-excision repair	6	40
GO:0006289	nucleotide-excision repair	6	53
GO:0005666	DNA-directed RNA polymerase III complex	3	13
GO:0005515	protein binding	198	4124
GO:0008380	RNA splicing	21	165
GO:0006367	transcription initiation from RNA polymerase II promoter	18	161
GO:0045087	innate immune response	12	452
GO:0006385	transcription elongation from RNA polymerase III promoter	3	14
GO:0000398	mRNA splicing, via spliceosome	15	128
GO:0016032	viral process	30	428
GO:0005736	DNA-directed RNA polymerase I complex	4	10
GO:0005829	cytosol	88	1787
GO:0006386	termination of RNA polymerase III transcription	3	14
GO:0006368	transcription elongation from RNA polymerase II promoter	8	52
GO:0001055	RNA polymerase II activity	3	6
GO:0001056	RNA polymerase III activity	3	13
GO:0006360	transcription from RNA polymerase I promoter	4	27
GO:0032481	positive regulation of type I interferon production	3	48
GO:0003899	DNA-directed RNA polymerase activity	3	18
GO:0005634	nucleus	158	3246
GO:0050434	positive regulation of viral transcription	5	35
GO:0006370	7-methylguanosine mRNA capping	5	24
GO:0006383	transcription from RNA polymerase III promoter	6	29
GO:0003677	DNA binding	52	947
GO:0010467	gene expression	49	535
GO:0005654	nucleoplasm	68	876
GO:0005665	DNA-directed RNA polymerase II, core complex	3	13
GO:0001054	RNA polymerase I activity	4	10
GO:0006281	DNA repair	24	203
GO:0006366	transcription from RNA polymerase II promoter	23	341