Accession number | Name | Occurrences in all snw genes | Occurrences in all int/reg genes |
---|---|---|---|
GO:0010467 | gene expression | 49 | 535 |
Gene Symbol | Entrez Gene ID | Frequency | chia-screen-data-Fav gene score | Best subnetwork score | Degree | Transcription factor | Chia-Hits Primary | Chia-Hits Secondary |
---|---|---|---|---|---|---|---|---|
VARS | 7407 | 60 | -2.366 | 2.689 | 124 | TF | Yes | - |
CPSF3 | 51692 | 43 | -2.686 | 2.503 | 31 | - | Yes | Yes |
NCBP1 | 4686 | 41 | -2.510 | 2.459 | 44 | - | Yes | Yes |
EIF2S2 | 8894 | 40 | -2.999 | 2.459 | 22 | - | Yes | Yes |
HNRNPU | 3192 | 39 | -2.869 | 2.644 | 33 | - | Yes | - |
ETF1 | 2107 | 35 | -2.829 | 2.503 | 6 | - | Yes | Yes |
POLR2E | 5434 | 30 | -2.037 | 2.644 | 201 | TF | Yes | - |
KARS | 3735 | 12 | -1.759 | 2.428 | 123 | TF | - | - |
FUS | 2521 | 11 | -1.980 | 2.414 | 53 | TF | - | - |
GTF2A2 | 2958 | 9 | -1.938 | 2.377 | 41 | TF | - | - |
PAPOLA | 10914 | 9 | -1.996 | 2.455 | 19 | - | - | - |
EIF2B3 | 8891 | 8 | -2.546 | 2.435 | 4 | - | Yes | Yes |
GTF3C3 | 9330 | 5 | -1.450 | 2.428 | 62 | TF | - | - |
PRPF4 | 9128 | 5 | -1.520 | 2.342 | 138 | TF | - | - |
EIF2S1 | 1965 | 5 | -1.801 | 2.410 | 63 | TF | - | - |
CNOT1 | 23019 | 4 | -2.347 | 2.263 | 34 | - | Yes | - |
SF3A2 | 8175 | 3 | -1.845 | 2.472 | 17 | TF | - | - |
EPRS | 2058 | 3 | -1.286 | 2.286 | 139 | TF | - | - |
EIF2S3 | 1968 | 3 | -1.940 | 2.345 | 13 | - | - | - |
SF3A1 | 10291 | 3 | -2.787 | 2.472 | 8 | - | Yes | Yes |
POLR2H | 5437 | 2 | -1.960 | 2.204 | 14 | - | - | - |
GTF3C2 | 2976 | 2 | -1.230 | 2.225 | 179 | TF | - | - |
MAPK14 | 1432 | 2 | -1.902 | 2.386 | 32 | - | - | - |
MED13 | 9969 | 2 | -2.073 | 2.225 | 2 | - | Yes | - |
DCP1B | 196513 | 1 | -1.989 | 2.200 | 5 | - | - | - |
EIF1AX | 1964 | 1 | -1.385 | 2.259 | 43 | TF | - | - |
NUDT21 | 11051 | 1 | -1.273 | 2.307 | 61 | - | - | - |
HDAC1 | 3065 | 1 | -1.712 | 2.232 | 13 | TF | - | - |
MED14 | 9282 | 1 | -2.420 | 2.207 | 9 | - | Yes | - |
NR2C1 | 7181 | 1 | -1.453 | 2.239 | 8 | TF | - | - |
POLR2L | 5441 | 1 | -1.972 | 2.335 | 17 | TF | - | - |
TRIM28 | 10155 | 1 | -1.234 | 2.210 | 190 | TF | - | - |
WWTR1 | 25937 | 1 | -1.886 | 2.204 | 43 | TF | - | - |
PPA2 | 27068 | 1 | -1.714 | 2.215 | 23 | - | - | - |
PSMD2 | 5708 | 1 | -4.172 | 2.276 | 3 | - | Yes | Yes |
ERCC2 | 2068 | 1 | -1.421 | 2.379 | 12 | TF | - | - |
GTF3C5 | 9328 | 1 | -1.106 | 2.204 | 8 | - | - | - |
EDC3 | 80153 | 1 | -0.943 | 2.203 | 42 | - | - | - |
MED27 | 9442 | 1 | -1.337 | 2.229 | 14 | - | - | - |
ZNF45 | 7596 | 1 | -0.915 | 2.279 | 4 | TF | - | - |
SMG7 | 9887 | 1 | -1.753 | 2.303 | 58 | TF | - | - |
LSM5 | 23658 | 1 | -1.285 | 2.259 | 36 | - | - | - |
PSMA1 | 5682 | 1 | -1.363 | 2.230 | 29 | - | - | - |
EEF1B2 | 1933 | 1 | -1.469 | 2.259 | 31 | TF | - | - |
MED20 | 9477 | 1 | -1.620 | 2.503 | 14 | - | - | - |
EIF3B | 8662 | 1 | -1.392 | 2.192 | 50 | - | - | - |
MEN1 | 4221 | 1 | -1.226 | 2.240 | 13 | - | - | - |
TAF4 | 6874 | 1 | -0.954 | 2.285 | 4 | TF | - | - |
TAF12 | 6883 | 1 | -2.134 | 2.234 | 5 | - | Yes | - |
Subnetwork ID | chia-screen-data-Fav score | Size | Highlighted genes | Hypergeometric test | Corrected p-value | Enrichment ratio | Occurrences in subnetwork |
---|---|---|---|---|---|---|---|
reg-snw-8888 | 2.326 | 13 | 11 | 1.57e-01 | 1.00e+00 | 1.490 | 2 |
reg-snw-3832 | 2.189 | 15 | 11 | 1.97e-01 | 1.00e+00 | 1.283 | 2 |
reg-snw-23279 | 2.387 | 13 | 10 | 3.10e-02 | 1.00e+00 | 2.075 | 3 |
reg-snw-84455 | 2.239 | 14 | 9 | 5.41e-05 | 5.28e-01 | 2.968 | 6 |
reg-snw-10576 | 2.377 | 20 | 13 | 5.40e-06 | 5.27e-02 | 2.868 | 8 |
reg-snw-9732 | 2.379 | 12 | 9 | 3.10e-03 | 1.00e+00 | 2.605 | 4 |
reg-snw-9328 | 2.204 | 13 | 7 | 3.10e-02 | 1.00e+00 | 2.075 | 3 |
reg-snw-8396 | 2.246 | 8 | 5 | 3.63e-01 | 1.00e+00 | 1.190 | 1 |
reg-snw-8458 | 2.382 | 9 | 7 | 1.07e-02 | 1.00e+00 | 2.605 | 3 |
reg-snw-27130 | 2.286 | 18 | 13 | 2.29e-03 | 1.00e+00 | 2.342 | 5 |
reg-snw-1175 | 2.367 | 11 | 8 | 2.16e-03 | 1.00e+00 | 2.731 | 4 |
reg-snw-5434 | 2.644 | 7 | 7 | 4.85e-03 | 1.00e+00 | 2.968 | 3 |
reg-snw-284695 | 2.380 | 7 | 6 | 5.24e-02 | 1.00e+00 | 2.383 | 2 |
reg-snw-55153 | 2.231 | 17 | 12 | 1.94e-04 | 1.00e+00 | 2.688 | 6 |
reg-snw-7090 | 2.251 | 25 | 16 | 3.63e-05 | 3.55e-01 | 2.546 | 8 |
reg-snw-908 | 2.244 | 11 | 8 | 1.19e-01 | 1.00e+00 | 1.731 | 2 |
reg-snw-84948 | 2.194 | 5 | 3 | 2.46e-01 | 1.00e+00 | 1.868 | 1 |
reg-snw-11051 | 2.307 | 25 | 17 | 3.63e-05 | 3.55e-01 | 2.546 | 8 |
reg-snw-27338 | 2.342 | 19 | 13 | 3.40e-06 | 3.32e-02 | 2.942 | 8 |
reg-snw-2551 | 2.238 | 10 | 7 | 1.47e-02 | 1.00e+00 | 2.453 | 3 |
reg-snw-9650 | 2.380 | 15 | 13 | 7.49e-03 | 1.00e+00 | 2.283 | 4 |
reg-snw-5425 | 2.393 | 9 | 6 | 8.35e-02 | 1.00e+00 | 2.020 | 2 |
reg-snw-4221 | 2.240 | 13 | 9 | 3.10e-02 | 1.00e+00 | 2.075 | 3 |
reg-snw-79872 | 2.445 | 6 | 5 | 2.87e-01 | 1.00e+00 | 1.605 | 1 |
reg-snw-90850 | 2.200 | 12 | 6 | 2.48e-02 | 1.00e+00 | 2.190 | 3 |
reg-snw-2783 | 2.192 | 16 | 9 | 1.31e-04 | 1.00e+00 | 2.775 | 6 |
reg-snw-9782 | 2.329 | 9 | 6 | 9.00e-04 | 1.00e+00 | 3.020 | 4 |
reg-snw-4927 | 2.292 | 10 | 6 | 1.01e-01 | 1.00e+00 | 1.868 | 2 |
reg-snw-91746 | 2.300 | 13 | 10 | 3.10e-02 | 1.00e+00 | 2.075 | 3 |
reg-snw-51566 | 2.348 | 8 | 6 | 3.63e-01 | 1.00e+00 | 1.190 | 1 |
reg-snw-9442 | 2.229 | 15 | 10 | 9.19e-04 | 1.00e+00 | 2.605 | 5 |
reg-snw-3735 | 2.341 | 8 | 5 | 3.63e-01 | 1.00e+00 | 1.190 | 1 |
reg-snw-2314 | 2.213 | 10 | 9 | 1.44e-03 | 1.00e+00 | 2.868 | 4 |
reg-snw-191 | 2.287 | 20 | 14 | 3.78e-03 | 1.00e+00 | 2.190 | 5 |
reg-snw-26263 | 2.369 | 14 | 10 | 3.79e-02 | 1.00e+00 | 1.968 | 3 |
reg-snw-9631 | 2.312 | 20 | 15 | 2.14e-02 | 1.00e+00 | 1.868 | 4 |
reg-snw-90480 | 2.431 | 8 | 7 | 7.44e-03 | 1.00e+00 | 2.775 | 3 |
reg-snw-11180 | 2.242 | 17 | 11 | 1.20e-02 | 1.00e+00 | 2.103 | 4 |
reg-snw-57541 | 2.192 | 14 | 9 | 3.79e-02 | 1.00e+00 | 1.968 | 3 |
reg-snw-137695 | 2.215 | 8 | 5 | 7.44e-03 | 1.00e+00 | 2.775 | 3 |
reg-snw-150962 | 2.255 | 13 | 10 | 3.10e-02 | 1.00e+00 | 2.075 | 3 |
reg-snw-25996 | 2.217 | 21 | 16 | 1.05e-01 | 1.00e+00 | 1.383 | 3 |
reg-snw-8562 | 2.263 | 32 | 24 | 2.51e-04 | 1.00e+00 | 2.190 | 8 |
reg-snw-7596 | 2.279 | 16 | 11 | 1.28e-03 | 1.00e+00 | 2.512 | 5 |
reg-snw-64146 | 2.308 | 12 | 8 | 1.38e-01 | 1.00e+00 | 1.605 | 2 |
reg-snw-6051 | 2.223 | 15 | 9 | 7.49e-03 | 1.00e+00 | 2.283 | 4 |
reg-snw-10055 | 2.386 | 18 | 13 | 2.29e-03 | 1.00e+00 | 2.342 | 5 |
reg-snw-9063 | 2.308 | 16 | 10 | 2.18e-01 | 1.00e+00 | 1.190 | 2 |
reg-snw-9477 | 2.503 | 10 | 8 | 1.44e-03 | 1.00e+00 | 2.868 | 4 |
reg-snw-51060 | 2.225 | 29 | 24 | 4.24e-03 | 1.00e+00 | 1.917 | 6 |
reg-snw-708 | 2.200 | 33 | 23 | 8.21e-03 | 1.00e+00 | 1.731 | 6 |
reg-snw-7334 | 2.284 | 9 | 7 | 9.00e-04 | 1.00e+00 | 3.020 | 4 |
reg-snw-5471 | 2.239 | 28 | 22 | 1.12e-05 | 1.10e-01 | 2.553 | 9 |
reg-snw-2068 | 2.379 | 6 | 4 | 2.87e-01 | 1.00e+00 | 1.605 | 1 |
reg-snw-10914 | 2.455 | 5 | 4 | 1.51e-03 | 1.00e+00 | 3.453 | 3 |
reg-snw-9330 | 2.428 | 11 | 8 | 1.70e-04 | 1.00e+00 | 3.053 | 5 |
reg-snw-80830 | 2.230 | 19 | 11 | 8.25e-02 | 1.00e+00 | 1.527 | 3 |
reg-snw-30968 | 2.435 | 5 | 3 | 2.46e-01 | 1.00e+00 | 1.868 | 1 |
reg-snw-22948 | 2.389 | 17 | 13 | 6.27e-02 | 1.00e+00 | 1.688 | 3 |
reg-snw-7543 | 2.200 | 20 | 13 | 2.14e-02 | 1.00e+00 | 1.868 | 4 |
reg-snw-4781 | 2.202 | 8 | 5 | 6.73e-02 | 1.00e+00 | 2.190 | 2 |
reg-snw-5799 | 2.281 | 13 | 11 | 5.20e-01 | 1.00e+00 | 0.490 | 1 |
reg-snw-10767 | 2.276 | 18 | 12 | 1.47e-02 | 1.00e+00 | 2.020 | 4 |
reg-snw-81608 | 2.459 | 12 | 10 | 2.48e-02 | 1.00e+00 | 2.190 | 3 |
reg-snw-28985 | 2.410 | 19 | 16 | 3.86e-04 | 1.00e+00 | 2.527 | 6 |
reg-snw-5889 | 2.212 | 27 | 21 | 5.75e-02 | 1.00e+00 | 1.435 | 4 |
reg-snw-8624 | 2.286 | 24 | 20 | 2.18e-04 | 1.00e+00 | 2.412 | 7 |
reg-snw-7355 | 2.338 | 18 | 14 | 2.77e-04 | 1.00e+00 | 2.605 | 6 |
reg-snw-1153 | 2.386 | 12 | 9 | 3.10e-03 | 1.00e+00 | 2.605 | 4 |
reg-snw-463 | 2.412 | 6 | 4 | 2.87e-01 | 1.00e+00 | 1.605 | 1 |
reg-snw-6790 | 2.315 | 19 | 15 | 8.25e-02 | 1.00e+00 | 1.527 | 3 |
reg-snw-11333 | 2.430 | 10 | 9 | 1.47e-02 | 1.00e+00 | 2.453 | 3 |
reg-snw-2624 | 2.234 | 6 | 5 | 2.87e-01 | 1.00e+00 | 1.605 | 1 |
reg-snw-80153 | 2.203 | 32 | 22 | 2.51e-04 | 1.00e+00 | 2.190 | 8 |
reg-snw-55611 | 2.268 | 9 | 7 | 1.07e-02 | 1.00e+00 | 2.605 | 3 |
reg-snw-54471 | 2.203 | 7 | 5 | 3.26e-01 | 1.00e+00 | 1.383 | 1 |
reg-snw-6046 | 2.210 | 13 | 9 | 5.20e-01 | 1.00e+00 | 0.490 | 1 |
reg-snw-83998 | 2.204 | 14 | 9 | 5.74e-03 | 1.00e+00 | 2.383 | 4 |
reg-snw-10362 | 2.239 | 13 | 8 | 4.28e-03 | 1.00e+00 | 2.490 | 4 |
reg-snw-2744 | 2.207 | 9 | 5 | 1.07e-02 | 1.00e+00 | 2.605 | 3 |
reg-snw-6874 | 2.285 | 17 | 13 | 1.71e-05 | 1.67e-01 | 2.910 | 7 |
reg-snw-5905 | 2.303 | 13 | 8 | 4.32e-04 | 1.00e+00 | 2.811 | 5 |
reg-snw-5605 | 2.472 | 8 | 6 | 5.23e-04 | 1.00e+00 | 3.190 | 4 |
reg-snw-83990 | 2.201 | 19 | 11 | 8.25e-02 | 1.00e+00 | 1.527 | 3 |
reg-snw-2733 | 2.414 | 11 | 8 | 2.16e-03 | 1.00e+00 | 2.731 | 4 |
reg-snw-26121 | 2.202 | 9 | 5 | 1.07e-02 | 1.00e+00 | 2.605 | 3 |
reg-snw-1371 | 2.264 | 7 | 5 | 5.24e-02 | 1.00e+00 | 2.383 | 2 |
reg-snw-1062 | 2.228 | 15 | 12 | 1.97e-01 | 1.00e+00 | 1.283 | 2 |
reg-snw-5682 | 2.230 | 13 | 8 | 3.24e-05 | 3.17e-01 | 3.075 | 6 |
reg-snw-23780 | 2.223 | 24 | 16 | 1.41e-01 | 1.00e+00 | 1.190 | 3 |
reg-snw-3145 | 2.226 | 23 | 17 | 3.44e-02 | 1.00e+00 | 1.666 | 4 |
reg-snw-1111 | 2.288 | 22 | 16 | 1.16e-01 | 1.00e+00 | 1.316 | 3 |
reg-snw-23310 | 2.232 | 10 | 7 | 1.47e-02 | 1.00e+00 | 2.453 | 3 |
reg-snw-23658 | 2.259 | 19 | 13 | 4.03e-05 | 3.93e-01 | 2.749 | 7 |
reg-snw-84108 | 2.199 | 30 | 22 | 7.91e-02 | 1.00e+00 | 1.283 | 4 |
reg-snw-9921 | 2.335 | 6 | 3 | 2.87e-01 | 1.00e+00 | 1.605 | 1 |
reg-snw-6595 | 2.241 | 15 | 10 | 7.49e-03 | 1.00e+00 | 2.283 | 4 |
reg-snw-7511 | 2.345 | 12 | 9 | 3.10e-03 | 1.00e+00 | 2.605 | 4 |
reg-snw-10617 | 2.212 | 15 | 10 | 7.49e-03 | 1.00e+00 | 2.283 | 4 |
reg-snw-10196 | 2.454 | 5 | 4 | 2.68e-02 | 1.00e+00 | 2.868 | 2 |
reg-snw-151246 | 2.200 | 16 | 11 | 9.57e-03 | 1.00e+00 | 2.190 | 4 |
reg-snw-54920 | 2.249 | 7 | 5 | 5.24e-02 | 1.00e+00 | 2.383 | 2 |
reg-snw-26233 | 2.689 | 5 | 5 | 2.46e-01 | 1.00e+00 | 1.868 | 1 |
reg-snw-5034 | 2.298 | 13 | 9 | 3.24e-05 | 3.17e-01 | 3.075 | 6 |
reg-snw-339175 | 2.192 | 23 | 15 | 1.70e-06 | 1.66e-02 | 2.836 | 9 |
reg-snw-1452 | 2.207 | 7 | 5 | 3.26e-01 | 1.00e+00 | 1.383 | 1 |
reg-snw-84320 | 2.274 | 23 | 16 | 1.19e-03 | 1.00e+00 | 2.251 | 6 |
reg-snw-2335 | 2.280 | 7 | 4 | 3.26e-01 | 1.00e+00 | 1.383 | 1 |