reg-snw-284695

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.380	3.17e-08	1.40e-02	1.17e-02

chia-screen-data-Fav-reg-snw-284695 subnetwork

Genes (7)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
TAF2	6873	2	-2.384	2.380	6	TF	Yes	Yes
TPR	7175	10	-2.638	2.445	36	TF	Yes	Yes
ETF1	2107	35	-2.829	2.503	6	-	Yes	Yes
CENPA	1058	27	-2.185	2.393	205	TF	Yes	-
CPSF3	51692	43	-2.686	2.503	31	-	Yes	Yes
SYNCRIP	10492	42	-2.401	2.503	144	TF	Yes	Yes
[ ZNF326 ]	284695	1	-1.535	2.380	24	-	-	-

Interactions (6)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
ETF1	2107	SYNCRIP	10492	pd	<	reg.ITFP.txt: no annot
CENPA	1058	ZNF326	284695	pd	>	reg.ITFP.txt: no annot
TAF2	6873	ZNF326	284695	pd	>	reg.ITFP.txt: no annot
TPR	7175	ZNF326	284695	pd	>	reg.ITFP.txt: no annot
SYNCRIP	10492	CPSF3	51692	pd	>	reg.ITFP.txt: no annot
SYNCRIP	10492	ZNF326	284695	pd	>	reg.ITFP.txt: no annot

Related GO terms (136)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0008380	RNA splicing	1.58e-04	1.00e+00	4.665	3	21	165
GO:0003723	RNA binding	5.19e-04	1.00e+00	4.083	3	22	247
GO:0016149	translation release factor activity, codon specific	7.17e-04	1.00e+00	10.446	1	1	1
GO:1901673	regulation of spindle assembly involved in mitosis	7.17e-04	1.00e+00	10.446	1	1	1
GO:0043578	nuclear matrix organization	7.17e-04	1.00e+00	10.446	1	1	1
GO:0010965	regulation of mitotic sister chromatid separation	7.17e-04	1.00e+00	10.446	1	1	1
GO:0044609	DBIRD complex	7.17e-04	1.00e+00	10.446	1	1	1
GO:0000939	condensed chromosome inner kinetochore	7.17e-04	1.00e+00	10.446	1	1	1
GO:0008079	translation termination factor activity	7.17e-04	1.00e+00	10.446	1	1	1
GO:0006404	RNA import into nucleus	7.17e-04	1.00e+00	10.446	1	1	1
GO:0031453	positive regulation of heterochromatin assembly	7.17e-04	1.00e+00	10.446	1	1	1
GO:0044822	poly(A) RNA binding	1.27e-03	1.00e+00	2.804	4	45	799
GO:0030529	ribonucleoprotein complex	1.42e-03	1.00e+00	5.088	2	5	82
GO:0000189	MAPK import into nucleus	1.43e-03	1.00e+00	9.446	1	1	2
GO:0031990	mRNA export from nucleus in response to heat stress	1.43e-03	1.00e+00	9.446	1	1	2
GO:0003747	translation release factor activity	1.43e-03	1.00e+00	9.446	1	2	2
GO:0042306	regulation of protein import into nucleus	1.43e-03	1.00e+00	9.446	1	1	2
GO:0070840	dynein complex binding	1.43e-03	1.00e+00	9.446	1	1	2
GO:0046832	negative regulation of RNA export from nucleus	1.43e-03	1.00e+00	9.446	1	1	2
GO:0005654	nucleoplasm	1.80e-03	1.00e+00	2.671	4	68	876
GO:0000778	condensed nuclear chromosome kinetochore	2.15e-03	1.00e+00	8.861	1	2	3
GO:0006405	RNA export from nucleus	2.15e-03	1.00e+00	8.861	1	1	3
GO:0010793	regulation of mRNA export from nucleus	2.15e-03	1.00e+00	8.861	1	1	3
GO:0071459	protein localization to chromosome, centromeric region	2.15e-03	1.00e+00	8.861	1	1	3
GO:0005515	protein binding	2.39e-03	1.00e+00	1.244	7	198	4124
GO:0016032	viral process	2.56e-03	1.00e+00	3.290	3	30	428
GO:0097452	GAIT complex	2.86e-03	1.00e+00	8.446	1	2	4
GO:0006449	regulation of translational termination	2.86e-03	1.00e+00	8.446	1	1	4
GO:0006999	nuclear pore organization	2.86e-03	1.00e+00	8.446	1	1	4
GO:0070849	response to epidermal growth factor	2.86e-03	1.00e+00	8.446	1	1	4
GO:0044615	nuclear pore nuclear basket	2.86e-03	1.00e+00	8.446	1	1	4
GO:0000398	mRNA splicing, via spliceosome	3.43e-03	1.00e+00	4.446	2	15	128
GO:0004521	endoribonuclease activity	3.58e-03	1.00e+00	8.124	1	1	5
GO:0006398	histone mRNA 3'-end processing	3.58e-03	1.00e+00	8.124	1	1	5
GO:0046825	regulation of protein export from nucleus	3.58e-03	1.00e+00	8.124	1	1	5
GO:0070934	CRD-mediated mRNA stabilization	3.58e-03	1.00e+00	8.124	1	2	5
GO:0000993	RNA polymerase II core binding	3.58e-03	1.00e+00	8.124	1	1	5
GO:0043495	protein anchor	3.58e-03	1.00e+00	8.124	1	1	5
GO:0071204	histone pre-mRNA 3'end processing complex	3.58e-03	1.00e+00	8.124	1	1	5
GO:0090267	positive regulation of mitotic cell cycle spindle assembly checkpoint	4.29e-03	1.00e+00	7.861	1	1	6
GO:0070937	CRD-mediated mRNA stability complex	4.29e-03	1.00e+00	7.861	1	2	6
GO:0032784	regulation of DNA-templated transcription, elongation	5.01e-03	1.00e+00	7.639	1	2	7
GO:0008409	5'-3' exonuclease activity	5.01e-03	1.00e+00	7.639	1	2	7
GO:0000780	condensed nuclear chromosome, centromeric region	5.01e-03	1.00e+00	7.639	1	1	7
GO:0005868	cytoplasmic dynein complex	5.01e-03	1.00e+00	7.639	1	1	7
GO:0051382	kinetochore assembly	5.01e-03	1.00e+00	7.639	1	2	7
GO:0042405	nuclear inclusion body	5.72e-03	1.00e+00	7.446	1	1	8
GO:0051292	nuclear pore complex assembly	5.72e-03	1.00e+00	7.446	1	4	8
GO:0035457	cellular response to interferon-alpha	5.72e-03	1.00e+00	7.446	1	1	8
GO:0006379	mRNA cleavage	6.44e-03	1.00e+00	7.276	1	2	9
GO:0045947	negative regulation of translational initiation	6.44e-03	1.00e+00	7.276	1	1	9
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	6.44e-03	1.00e+00	7.276	1	3	9
GO:0008143	poly(A) binding	7.15e-03	1.00e+00	7.124	1	2	10
GO:0006479	protein methylation	7.86e-03	1.00e+00	6.987	1	2	11
GO:0033276	transcription factor TFTC complex	7.86e-03	1.00e+00	6.987	1	3	11
GO:0051019	mitogen-activated protein kinase binding	7.86e-03	1.00e+00	6.987	1	1	11
GO:0090316	positive regulation of intracellular protein transport	7.86e-03	1.00e+00	6.987	1	1	11
GO:0005487	nucleocytoplasmic transporter activity	7.86e-03	1.00e+00	6.987	1	2	11
GO:0046827	positive regulation of protein export from nucleus	7.86e-03	1.00e+00	6.987	1	1	11
GO:0042307	positive regulation of protein import into nucleus	8.57e-03	1.00e+00	6.861	1	3	12
GO:0000132	establishment of mitotic spindle orientation	8.57e-03	1.00e+00	6.861	1	2	12
GO:0034399	nuclear periphery	8.57e-03	1.00e+00	6.861	1	3	12
GO:0043022	ribosome binding	1.21e-02	1.00e+00	6.359	1	2	17
GO:0006611	protein export from nucleus	1.28e-02	1.00e+00	6.276	1	1	18
GO:0006378	mRNA polyadenylation	1.28e-02	1.00e+00	6.276	1	3	18
GO:0003682	chromatin binding	1.28e-02	1.00e+00	3.469	2	15	252
GO:0005669	transcription factor TFIID complex	1.28e-02	1.00e+00	6.276	1	3	18
GO:0015631	tubulin binding	1.43e-02	1.00e+00	6.124	1	1	20
GO:0034080	CENP-A containing nucleosome assembly	1.43e-02	1.00e+00	6.124	1	2	20
GO:0071346	cellular response to interferon-gamma	1.43e-02	1.00e+00	6.124	1	2	20
GO:0072686	mitotic spindle	1.43e-02	1.00e+00	6.124	1	2	20
GO:0031647	regulation of protein stability	1.50e-02	1.00e+00	6.054	1	2	21
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	1.50e-02	1.00e+00	6.054	1	2	21
GO:0006606	protein import into nucleus	1.57e-02	1.00e+00	5.987	1	3	22
GO:0034605	cellular response to heat	1.57e-02	1.00e+00	5.987	1	1	22
GO:0010827	regulation of glucose transport	1.78e-02	1.00e+00	5.802	1	7	25
GO:0007094	mitotic spindle assembly checkpoint	1.78e-02	1.00e+00	5.802	1	4	25
GO:0000278	mitotic cell cycle	1.94e-02	1.00e+00	3.151	2	28	314
GO:0031072	heat shock protein binding	1.99e-02	1.00e+00	5.639	1	1	28
GO:0019898	extrinsic component of membrane	2.13e-02	1.00e+00	5.539	1	1	30
GO:0007077	mitotic nuclear envelope disassembly	2.27e-02	1.00e+00	5.446	1	9	32
GO:0017148	negative regulation of translation	2.34e-02	1.00e+00	5.402	1	5	33
GO:0014070	response to organic cyclic compound	2.41e-02	1.00e+00	5.359	1	2	34
GO:0000786	nucleosome	2.41e-02	1.00e+00	5.359	1	2	34
GO:0031124	mRNA 3'-end processing	2.48e-02	1.00e+00	5.317	1	4	35
GO:0008645	hexose transport	2.55e-02	1.00e+00	5.276	1	8	36
GO:0008237	metallopeptidase activity	2.69e-02	1.00e+00	5.198	1	3	38
GO:0006369	termination of RNA polymerase II transcription	2.69e-02	1.00e+00	5.198	1	5	38
GO:0006396	RNA processing	2.83e-02	1.00e+00	5.124	1	4	40
GO:0000775	chromosome, centromeric region	2.90e-02	1.00e+00	5.088	1	6	41
GO:0006406	mRNA export from nucleus	3.11e-02	1.00e+00	4.987	1	7	44
GO:0015758	glucose transport	3.39e-02	1.00e+00	4.861	1	8	48
GO:0006334	nucleosome assembly	3.60e-02	1.00e+00	4.774	1	4	51
GO:0005643	nuclear pore	3.60e-02	1.00e+00	4.774	1	12	51
GO:0000776	kinetochore	3.88e-02	1.00e+00	4.665	1	8	55
GO:0005681	spliceosomal complex	3.88e-02	1.00e+00	4.665	1	8	55
GO:0003729	mRNA binding	4.02e-02	1.00e+00	4.613	1	4	57
GO:0071013	catalytic step 2 spliceosome	4.29e-02	1.00e+00	4.515	1	5	61
GO:0006415	translational termination	4.43e-02	1.00e+00	4.469	1	2	63
GO:0016363	nuclear matrix	5.12e-02	1.00e+00	4.256	1	10	73
GO:0001649	osteoblast differentiation	5.19e-02	1.00e+00	4.237	1	5	74
GO:0010467	gene expression	5.24e-02	1.00e+00	2.383	2	49	535
GO:0005215	transporter activity	5.73e-02	1.00e+00	4.088	1	5	82
GO:0005635	nuclear envelope	5.80e-02	1.00e+00	4.071	1	6	83
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	5.87e-02	1.00e+00	4.054	1	5	84
GO:0000086	G2/M transition of mitotic cell cycle	6.75e-02	1.00e+00	3.846	1	7	97
GO:0006397	mRNA processing	7.63e-02	1.00e+00	3.665	1	12	110
GO:0031965	nuclear membrane	8.96e-02	1.00e+00	3.424	1	8	130
GO:0008270	zinc ion binding	9.05e-02	1.00e+00	1.940	2	39	727
GO:0044212	transcription regulatory region DNA binding	9.81e-02	1.00e+00	3.286	1	13	143
GO:0006367	transcription initiation from RNA polymerase II promoter	1.10e-01	1.00e+00	3.115	1	18	161
GO:0007067	mitotic nuclear division	1.12e-01	1.00e+00	3.080	1	9	165
GO:0016071	mRNA metabolic process	1.16e-01	1.00e+00	3.037	1	10	170
GO:0019221	cytokine-mediated signaling pathway	1.17e-01	1.00e+00	3.020	1	10	172
GO:0000166	nucleotide binding	1.20e-01	1.00e+00	2.987	1	13	176
GO:0006412	translation	1.21e-01	1.00e+00	2.970	1	12	178
GO:0005975	carbohydrate metabolic process	1.26e-01	1.00e+00	2.907	1	10	186
GO:0016070	RNA metabolic process	1.27e-01	1.00e+00	2.891	1	10	188
GO:0003677	DNA binding	1.42e-01	1.00e+00	1.559	2	52	947
GO:0046982	protein heterodimerization activity	1.75e-01	1.00e+00	2.396	1	11	265
GO:0006508	proteolysis	1.75e-01	1.00e+00	2.402	1	11	264
GO:0055085	transmembrane transport	2.13e-01	1.00e+00	2.084	1	13	329
GO:0006366	transcription from RNA polymerase II promoter	2.20e-01	1.00e+00	2.032	1	23	341
GO:0044267	cellular protein metabolic process	2.27e-01	1.00e+00	1.987	1	14	352
GO:0045893	positive regulation of transcription, DNA-templated	2.41e-01	1.00e+00	1.888	1	21	377
GO:0005783	endoplasmic reticulum	2.43e-01	1.00e+00	1.872	1	12	381
GO:0042803	protein homodimerization activity	2.69e-01	1.00e+00	1.705	1	13	428
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	2.85e-01	1.00e+00	1.613	1	29	456
GO:0005829	cytosol	3.76e-01	1.00e+00	0.643	2	88	1787
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	3.80e-01	1.00e+00	1.115	1	29	644
GO:0005634	nucleus	4.27e-01	1.00e+00	0.367	3	158	3246
GO:0044281	small molecule metabolic process	4.69e-01	1.00e+00	0.725	1	35	844
GO:0046872	metal ion binding	5.05e-01	1.00e+00	0.579	1	24	934
GO:0006351	transcription, DNA-templated	5.58e-01	1.00e+00	0.375	1	47	1076
GO:0005737	cytoplasm	6.03e-01	1.00e+00	0.084	2	127	2633
GO:0016020	membrane	6.03e-01	1.00e+00	0.209	1	56	1207

chia-Fav

reg-snw-284695

Statistics

Genes (7)

Interactions (6)

Related GO terms (136)