GO:0006366

transcription from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0006366transcription from RNA polymerase II promoter23341

Term information on AmiGO 2: GO:0006366

Genes (23)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Transcription factor Chia-Hits Primary Chia-Hits Secondary
CPSF3 51692 43-2.6862.50331-YesYes
NCBP1 4686 41-2.5102.45944-YesYes
POLR2E 5434 30-2.0372.644201TFYes-
GTF2A2 2958 9-1.9382.37741TF--
PAPOLA 10914 9-1.9962.45519---
FOXM1 2305 9-1.6692.412210TF--
FUBP1 8880 5-2.4142.38918TFYesYes
MED13L 23389 3-2.5502.30729-Yes-
NFRKB 4798 3-3.1292.25110-YesYes
POLR2H 5437 2-1.9602.20414---
NFIB 4781 2-1.5052.30740TF--
NFIC 4782 2-1.8442.28044TF--
ZFHX3 463 1-1.2962.41238TF--
GABPA 2551 1-1.4422.23858TF--
NUDT21 11051 1-1.2732.30761---
POLR2L 5441 1-1.9722.33517TF--
NFIX 4784 1-1.7722.2026TF--
ERCC6 2074 1-1.6042.3033TF--
ERCC2 2068 1-1.4212.37912TF--
GLI1 2735 1-1.3442.20416TF--
MED20 9477 1-1.6202.50314---
TAF4 6874 1-0.9542.2854TF--
TAF12 6883 1-2.1342.2345-Yes-

Subnetworks (97)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
reg-snw-8888 2.326 13 11 3.70e-01 1.00e+00 1.139 1
reg-snw-3832 2.189 15 11 4.13e-01 1.00e+00 0.933 1
reg-snw-23279 2.387 13 10 3.70e-01 1.00e+00 1.139 1
reg-snw-84455 2.239 14 9 3.92e-01 1.00e+00 1.032 1
reg-snw-10576 2.377 20 13 4.54e-03 1.00e+00 2.518 4
reg-snw-9732 2.379 12 9 3.47e-01 1.00e+00 1.255 1
reg-snw-9328 2.204 13 7 3.70e-01 1.00e+00 1.139 1
reg-snw-8396 2.246 8 5 2.48e-01 1.00e+00 1.840 1
reg-snw-8458 2.382 9 7 3.72e-02 1.00e+00 2.670 2
reg-snw-27130 2.286 18 13 4.73e-01 1.00e+00 0.670 1
reg-snw-1175 2.367 11 8 5.43e-02 1.00e+00 2.380 2
reg-snw-5434 2.644 7 7 2.20e-01 1.00e+00 2.032 1
reg-snw-284695 2.380 7 6 2.20e-01 1.00e+00 2.032 1
reg-snw-55153 2.231 17 12 1.99e-02 1.00e+00 2.337 3
reg-snw-7090 2.251 25 16 1.03e-02 1.00e+00 2.196 4
reg-snw-11051 2.307 25 17 1.50e-03 1.00e+00 2.518 5
reg-snw-27338 2.342 19 13 2.70e-02 1.00e+00 2.177 3
reg-snw-2551 2.238 10 7 4.22e-03 1.00e+00 3.103 3
reg-snw-9650 2.380 15 13 9.47e-02 1.00e+00 1.933 2
reg-snw-4221 2.240 13 9 7.36e-02 1.00e+00 2.139 2
reg-snw-79872 2.445 6 5 1.92e-01 1.00e+00 2.255 1
reg-snw-2783 2.192 16 9 1.06e-01 1.00e+00 1.840 2
reg-snw-9782 2.329 9 6 3.72e-02 1.00e+00 2.670 2
reg-snw-91746 2.300 13 10 3.70e-01 1.00e+00 1.139 1
reg-snw-9442 2.229 15 10 4.13e-01 1.00e+00 0.933 1
reg-snw-2314 2.213 10 9 2.99e-01 1.00e+00 1.518 1
reg-snw-191 2.287 20 14 1.53e-01 1.00e+00 1.518 2
reg-snw-26263 2.369 14 10 3.92e-01 1.00e+00 1.032 1
reg-snw-9631 2.312 20 15 3.10e-02 1.00e+00 2.103 3
reg-snw-90480 2.431 8 7 2.48e-01 1.00e+00 1.840 1
reg-snw-11180 2.242 17 11 4.54e-01 1.00e+00 0.752 1
reg-snw-128637 2.303 5 3 1.63e-01 1.00e+00 2.518 1
reg-snw-137695 2.215 8 5 2.48e-01 1.00e+00 1.840 1
reg-snw-150962 2.255 13 10 7.36e-02 1.00e+00 2.139 2
reg-snw-25996 2.217 21 16 1.66e-01 1.00e+00 1.447 2
reg-snw-8562 2.263 32 24 2.43e-02 1.00e+00 1.840 4
reg-snw-7596 2.279 16 11 1.06e-01 1.00e+00 1.840 2
reg-snw-64146 2.308 12 8 3.47e-01 1.00e+00 1.255 1
reg-snw-6051 2.223 15 9 9.47e-02 1.00e+00 1.933 2
reg-snw-10055 2.386 18 13 1.29e-01 1.00e+00 1.670 2
reg-snw-9063 2.308 16 10 4.34e-01 1.00e+00 0.840 1
reg-snw-9477 2.503 10 8 4.55e-02 1.00e+00 2.518 2
reg-snw-51060 2.225 29 24 6.44e-01 1.00e+00 -0.018 1
reg-snw-708 2.200 33 23 3.21e-01 1.00e+00 0.795 2
reg-snw-7334 2.284 9 7 3.72e-02 1.00e+00 2.670 2
reg-snw-5471 2.239 28 22 1.54e-02 1.00e+00 2.032 4
reg-snw-2068 2.379 6 4 1.92e-01 1.00e+00 2.255 1
reg-snw-10914 2.455 5 4 1.13e-02 1.00e+00 3.518 2
reg-snw-9330 2.428 11 8 3.24e-01 1.00e+00 1.380 1
reg-snw-80830 2.230 19 11 4.91e-01 1.00e+00 0.592 1
reg-snw-22948 2.389 17 13 1.99e-02 1.00e+00 2.337 3
reg-snw-1586 2.229 5 2 1.63e-01 1.00e+00 2.518 1
reg-snw-7543 2.200 20 13 1.53e-01 1.00e+00 1.518 2
reg-snw-4781 2.202 8 5 2.07e-03 1.00e+00 3.425 3
reg-snw-81608 2.459 12 10 3.47e-01 1.00e+00 1.255 1
reg-snw-28985 2.410 19 16 1.41e-01 1.00e+00 1.592 2
reg-snw-5889 2.212 27 21 2.43e-01 1.00e+00 1.085 2
reg-snw-8624 2.286 24 20 8.93e-03 1.00e+00 2.255 4
reg-snw-7355 2.338 18 14 1.29e-01 1.00e+00 1.670 2
reg-snw-1153 2.386 12 9 3.47e-01 1.00e+00 1.255 1
reg-snw-463 2.412 6 4 7.80e-04 1.00e+00 3.840 3
reg-snw-6790 2.315 19 15 1.41e-01 1.00e+00 1.592 2
reg-snw-11333 2.430 10 9 2.99e-01 1.00e+00 1.518 1
reg-snw-2624 2.234 6 5 1.92e-01 1.00e+00 2.255 1
reg-snw-80153 2.203 32 22 9.96e-02 1.00e+00 1.425 3
reg-snw-55611 2.268 9 7 2.74e-01 1.00e+00 1.670 1
reg-snw-54471 2.203 7 5 2.20e-01 1.00e+00 2.032 1
reg-snw-83998 2.204 14 9 8.39e-02 1.00e+00 2.032 2
reg-snw-10362 2.239 13 8 7.36e-02 1.00e+00 2.139 2
reg-snw-2744 2.207 9 5 3.72e-02 1.00e+00 2.670 2
reg-snw-6874 2.285 17 13 1.99e-02 1.00e+00 2.337 3
reg-snw-5905 2.303 13 8 3.70e-01 1.00e+00 1.139 1
reg-snw-5605 2.472 8 6 2.48e-01 1.00e+00 1.840 1
reg-snw-83990 2.201 19 11 4.91e-01 1.00e+00 0.592 1
reg-snw-2733 2.414 11 8 3.24e-01 1.00e+00 1.380 1
reg-snw-26121 2.202 9 5 3.72e-02 1.00e+00 2.670 2
reg-snw-1371 2.264 7 5 2.20e-01 1.00e+00 2.032 1
reg-snw-1062 2.228 15 12 9.47e-02 1.00e+00 1.933 2
reg-snw-5682 2.230 13 8 7.36e-02 1.00e+00 2.139 2
reg-snw-23780 2.223 24 16 5.74e-01 1.00e+00 0.255 1
reg-snw-3145 2.226 23 17 4.46e-02 1.00e+00 1.901 3
reg-snw-1111 2.288 22 16 1.78e-01 1.00e+00 1.380 2
reg-snw-23310 2.232 10 7 2.99e-01 1.00e+00 1.518 1
reg-snw-23658 2.259 19 13 1.41e-01 1.00e+00 1.592 2
reg-snw-84108 2.199 30 22 2.82e-01 1.00e+00 0.933 2
reg-snw-9921 2.335 6 3 1.92e-01 1.00e+00 2.255 1
reg-snw-6595 2.241 15 10 4.13e-01 1.00e+00 0.933 1
reg-snw-7511 2.345 12 9 3.47e-01 1.00e+00 1.255 1
reg-snw-10617 2.212 15 10 4.13e-01 1.00e+00 0.933 1
reg-snw-10196 2.454 5 4 1.63e-01 1.00e+00 2.518 1
reg-snw-151246 2.200 16 11 1.06e-01 1.00e+00 1.840 2
reg-snw-54920 2.249 7 5 2.20e-01 1.00e+00 2.032 1
reg-snw-5034 2.298 13 9 3.70e-01 1.00e+00 1.139 1
reg-snw-339175 2.192 23 15 1.91e-01 1.00e+00 1.316 2
reg-snw-1452 2.207 7 5 2.20e-01 1.00e+00 2.032 1
reg-snw-84320 2.274 23 16 1.91e-01 1.00e+00 1.316 2
reg-snw-2335 2.280 7 4 2.20e-01 1.00e+00 2.032 1