Chia-study-screening

Genes (1)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
NCBP1	4686	41	-2.510	2.459	44	-	Yes	Yes

Subnetwork ID	chia-screen-data-Fav score	Size	Highlighted genes
reg-snw-23279	2.387	13	10
reg-snw-10576	2.377	20	13
reg-snw-8458	2.382	9	7
reg-snw-8396	2.246	8	5
reg-snw-27130	2.286	18	13
reg-snw-7090	2.251	25	16
reg-snw-55153	2.231	17	12
reg-snw-11051	2.307	25	17
reg-snw-27338	2.342	19	13
reg-snw-9650	2.380	15	13
reg-snw-79872	2.445	6	5
reg-snw-191	2.287	20	14
reg-snw-26263	2.369	14	10
reg-snw-9631	2.312	20	15
reg-snw-25996	2.217	21	16
reg-snw-8562	2.263	32	24
reg-snw-7596	2.279	16	11
reg-snw-10055	2.386	18	13
reg-snw-9063	2.308	16	10
reg-snw-708	2.200	33	23
reg-snw-5471	2.239	28	22
reg-snw-80830	2.230	19	11
reg-snw-22948	2.389	17	13
reg-snw-7543	2.200	20	13
reg-snw-81608	2.459	12	10
reg-snw-28985	2.410	19	16
reg-snw-5889	2.212	27	21
reg-snw-8624	2.286	24	20
reg-snw-7355	2.338	18	14
reg-snw-6790	2.315	19	15
reg-snw-80153	2.203	32	22
reg-snw-54471	2.203	7	5
reg-snw-6874	2.285	17	13
reg-snw-83990	2.201	19	11
reg-snw-23780	2.223	24	16
reg-snw-1111	2.288	22	16
reg-snw-23658	2.259	19	13
reg-snw-84108	2.199	30	22
reg-snw-151246	2.200	16	11
reg-snw-339175	2.192	23	15
reg-snw-84320	2.274	23	16

Accession number	Name	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0006369	termination of RNA polymerase II transcription	5	38
GO:0005515	protein binding	198	4124
GO:0005737	cytoplasm	127	2633
GO:0000398	mRNA splicing, via spliceosome	15	128
GO:0000339	RNA cap binding	1	7
GO:0003723	RNA binding	22	247
GO:0005829	cytosol	88	1787
GO:0006368	transcription elongation from RNA polymerase II promoter	8	52
GO:0034660	ncRNA metabolic process	1	20
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	5	84
GO:0000387	spliceosomal snRNP assembly	1	22
GO:0005845	mRNA cap binding complex	1	8
GO:0005739	mitochondrion	32	659
GO:0016070	RNA metabolic process	10	188
GO:0010467	gene expression	49	535
GO:0005730	nucleolus	74	1217
GO:0005654	nucleoplasm	68	876
GO:0006379	mRNA cleavage	2	9
GO:0044822	poly(A) RNA binding	45	799
GO:0006446	regulation of translational initiation	2	29
GO:0005886	plasma membrane	46	1784
GO:0008380	RNA splicing	21	165
GO:0016071	mRNA metabolic process	10	170
GO:0006406	mRNA export from nucleus	7	44
GO:0045292	mRNA cis splicing, via spliceosome	1	4
GO:0016032	viral process	30	428
GO:0005634	nucleus	158	3246
GO:0031124	mRNA 3'-end processing	4	35
GO:0050434	positive regulation of viral transcription	5	35
GO:0006370	7-methylguanosine mRNA capping	5	24
GO:0005846	nuclear cap binding complex	1	2
GO:0008334	histone mRNA metabolic process	1	11
GO:0031442	positive regulation of mRNA 3'-end processing	1	4
GO:0031047	gene silencing by RNA	2	18
GO:0030529	ribonucleoprotein complex	5	82
GO:0006366	transcription from RNA polymerase II promoter	23	341