reg-snw-2744

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.207	2.64e-07	4.48e-02	3.40e-02

chia-screen-data-Fav-reg-snw-2744 subnetwork

Genes (9)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
CPD	1362	1	-1.922	2.207	6	-	-	-
[ GLS ]	2744	1	-1.526	2.207	51	TF	-	-
SYNCRIP	10492	42	-2.401	2.503	144	TF	Yes	Yes
AGPS	8540	23	-2.424	2.410	27	-	Yes	Yes
ADCY1	107	1	-1.715	2.207	4	-	-	-
ETF1	2107	35	-2.829	2.503	6	-	Yes	Yes
CPSF3	51692	43	-2.686	2.503	31	-	Yes	Yes
CLASP1	23332	10	-2.365	2.459	39	TF	Yes	-
PAPOLA	10914	9	-1.996	2.455	19	-	-	-

Interactions (9)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
GLS	2744	AGPS	8540	pd	>	reg.ITFP.txt: no annot
ETF1	2107	SYNCRIP	10492	pd	<	reg.ITFP.txt: no annot
GLS	2744	PAPOLA	10914	pd	>	reg.ITFP.txt: no annot
SYNCRIP	10492	PAPOLA	10914	pd	>	reg.ITFP.txt: no annot
PAPOLA	10914	CLASP1	23332	pd	<	reg.ITFP.txt: no annot
AGPS	8540	SYNCRIP	10492	pd	<	reg.ITFP.txt: no annot
SYNCRIP	10492	CPSF3	51692	pd	>	reg.ITFP.txt: no annot
CPD	1362	GLS	2744	pd	<	reg.ITFP.txt: no annot
ADCY1	107	GLS	2744	pd	<	reg.ITFP.txt: no annot

Related GO terms (137)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0003723	RNA binding	4.56e-05	4.45e-01	4.135	4	22	247
GO:0000398	mRNA splicing, via spliceosome	1.74e-04	1.00e+00	4.668	3	15	128
GO:0008380	RNA splicing	3.69e-04	1.00e+00	4.302	3	21	165
GO:0031124	mRNA 3'-end processing	4.42e-04	1.00e+00	5.954	2	4	35
GO:0006369	termination of RNA polymerase II transcription	5.22e-04	1.00e+00	5.836	2	5	38
GO:0016149	translation release factor activity, codon specific	9.22e-04	1.00e+00	10.083	1	1	1
GO:0031592	centrosomal corona	9.22e-04	1.00e+00	10.083	1	1	1
GO:0008609	alkylglycerone-phosphate synthase activity	9.22e-04	1.00e+00	10.083	1	1	1
GO:0008079	translation termination factor activity	9.22e-04	1.00e+00	10.083	1	1	1
GO:0004185	serine-type carboxypeptidase activity	9.22e-04	1.00e+00	10.083	1	1	1
GO:0031111	negative regulation of microtubule polymerization or depolymerization	1.84e-03	1.00e+00	9.083	1	1	2
GO:0030981	cortical microtubule cytoskeleton	1.84e-03	1.00e+00	9.083	1	1	2
GO:0003747	translation release factor activity	1.84e-03	1.00e+00	9.083	1	2	2
GO:0051294	establishment of spindle orientation	1.84e-03	1.00e+00	9.083	1	1	2
GO:0004359	glutaminase activity	1.84e-03	1.00e+00	9.083	1	1	2
GO:0008611	ether lipid biosynthetic process	1.84e-03	1.00e+00	9.083	1	1	2
GO:0030529	ribonucleoprotein complex	2.41e-03	1.00e+00	4.726	2	5	82
GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	2.76e-03	1.00e+00	8.499	1	1	3
GO:0006543	glutamine catabolic process	2.76e-03	1.00e+00	8.499	1	2	3
GO:0008294	calcium- and calmodulin-responsive adenylate cyclase activity	2.76e-03	1.00e+00	8.499	1	1	3
GO:0006537	glutamate biosynthetic process	3.68e-03	1.00e+00	8.083	1	1	4
GO:0097452	GAIT complex	3.68e-03	1.00e+00	8.083	1	2	4
GO:0004652	polynucleotide adenylyltransferase activity	3.68e-03	1.00e+00	8.083	1	1	4
GO:0006449	regulation of translational termination	3.68e-03	1.00e+00	8.083	1	1	4
GO:0043631	RNA polyadenylation	3.68e-03	1.00e+00	8.083	1	1	4
GO:0043515	kinetochore binding	3.68e-03	1.00e+00	8.083	1	2	4
GO:0004521	endoribonuclease activity	4.60e-03	1.00e+00	7.762	1	1	5
GO:0008610	lipid biosynthetic process	4.60e-03	1.00e+00	7.762	1	1	5
GO:0010458	exit from mitosis	4.60e-03	1.00e+00	7.762	1	2	5
GO:0006398	histone mRNA 3'-end processing	4.60e-03	1.00e+00	7.762	1	1	5
GO:0005828	kinetochore microtubule	4.60e-03	1.00e+00	7.762	1	1	5
GO:0070934	CRD-mediated mRNA stabilization	4.60e-03	1.00e+00	7.762	1	2	5
GO:0071204	histone pre-mRNA 3'end processing complex	4.60e-03	1.00e+00	7.762	1	1	5
GO:0031023	microtubule organizing center organization	4.60e-03	1.00e+00	7.762	1	1	5
GO:0002087	regulation of respiratory gaseous exchange by neurological system process	5.52e-03	1.00e+00	7.499	1	1	6
GO:0070937	CRD-mediated mRNA stability complex	5.52e-03	1.00e+00	7.499	1	2	6
GO:0008409	5'-3' exonuclease activity	6.44e-03	1.00e+00	7.276	1	2	7
GO:0004181	metallocarboxypeptidase activity	7.35e-03	1.00e+00	7.083	1	1	8
GO:0071949	FAD binding	7.35e-03	1.00e+00	7.083	1	1	8
GO:0034453	microtubule anchoring	8.27e-03	1.00e+00	6.914	1	1	9
GO:0006379	mRNA cleavage	8.27e-03	1.00e+00	6.914	1	2	9
GO:0010226	response to lithium ion	8.27e-03	1.00e+00	6.914	1	2	9
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	8.27e-03	1.00e+00	6.914	1	3	9
GO:0001967	suckling behavior	9.18e-03	1.00e+00	6.762	1	4	10
GO:0008143	poly(A) binding	9.18e-03	1.00e+00	6.762	1	2	10
GO:0001578	microtubule bundle formation	9.18e-03	1.00e+00	6.762	1	2	10
GO:0051010	microtubule plus-end binding	1.01e-02	1.00e+00	6.624	1	2	11
GO:0007026	negative regulation of microtubule depolymerization	1.01e-02	1.00e+00	6.624	1	2	11
GO:0007020	microtubule nucleation	1.01e-02	1.00e+00	6.624	1	1	11
GO:0006479	protein methylation	1.01e-02	1.00e+00	6.624	1	2	11
GO:0034199	activation of protein kinase A activity	1.01e-02	1.00e+00	6.624	1	1	11
GO:0008652	cellular amino acid biosynthetic process	1.01e-02	1.00e+00	6.624	1	2	11
GO:0010467	gene expression	1.07e-02	1.00e+00	2.605	3	49	535
GO:0014047	glutamate secretion	1.10e-02	1.00e+00	6.499	1	1	12
GO:0006171	cAMP biosynthetic process	1.10e-02	1.00e+00	6.499	1	1	12
GO:0005782	peroxisomal matrix	1.47e-02	1.00e+00	6.083	1	1	16
GO:0007268	synaptic transmission	1.55e-02	1.00e+00	3.342	2	7	214
GO:0043022	ribosome binding	1.56e-02	1.00e+00	5.996	1	2	17
GO:0006378	mRNA polyadenylation	1.65e-02	1.00e+00	5.914	1	3	18
GO:0007193	adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway	1.74e-02	1.00e+00	5.836	1	1	19
GO:0016020	membrane	1.75e-02	1.00e+00	1.846	4	56	1207
GO:0007163	establishment or maintenance of cell polarity	1.83e-02	1.00e+00	5.762	1	1	20
GO:0071346	cellular response to interferon-gamma	1.83e-02	1.00e+00	5.762	1	2	20
GO:0071377	cellular response to glucagon stimulus	1.83e-02	1.00e+00	5.762	1	2	20
GO:0007616	long-term memory	1.83e-02	1.00e+00	5.762	1	2	20
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	1.92e-02	1.00e+00	5.691	1	2	21
GO:0006833	water transport	2.10e-02	1.00e+00	5.560	1	1	23
GO:0005881	cytoplasmic microtubule	2.19e-02	1.00e+00	5.499	1	3	24
GO:0005876	spindle microtubule	2.19e-02	1.00e+00	5.499	1	4	24
GO:0030145	manganese ion binding	2.37e-02	1.00e+00	5.383	1	3	26
GO:0007189	adenylate cyclase-activating G-protein coupled receptor signaling pathway	2.46e-02	1.00e+00	5.329	1	1	27
GO:0005778	peroxisomal membrane	2.64e-02	1.00e+00	5.225	1	3	29
GO:0042752	regulation of circadian rhythm	2.64e-02	1.00e+00	5.225	1	5	29
GO:0007269	neurotransmitter secretion	2.73e-02	1.00e+00	5.177	1	1	30
GO:0017148	negative regulation of translation	3.00e-02	1.00e+00	5.039	1	5	33
GO:0000226	microtubule cytoskeleton organization	3.27e-02	1.00e+00	4.914	1	1	36
GO:0051289	protein homotetramerization	3.27e-02	1.00e+00	4.914	1	2	36
GO:0007202	activation of phospholipase C activity	3.36e-02	1.00e+00	4.874	1	1	37
GO:0006396	RNA processing	3.63e-02	1.00e+00	4.762	1	4	40
GO:0044281	small molecule metabolic process	3.64e-02	1.00e+00	1.947	3	35	844
GO:0006366	transcription from RNA polymerase II promoter	3.72e-02	1.00e+00	2.670	2	23	341
GO:0006406	mRNA export from nucleus	3.98e-02	1.00e+00	4.624	1	7	44
GO:0005654	nucleoplasm	4.01e-02	1.00e+00	1.894	3	68	876
GO:0007409	axonogenesis	4.07e-02	1.00e+00	4.592	1	2	45
GO:0007623	circadian rhythm	4.34e-02	1.00e+00	4.499	1	2	48
GO:0051301	cell division	4.43e-02	1.00e+00	4.469	1	2	49
GO:0005777	peroxisome	4.52e-02	1.00e+00	4.440	1	2	50
GO:0000776	kinetochore	4.96e-02	1.00e+00	4.302	1	8	55
GO:0000777	condensed chromosome kinetochore	5.13e-02	1.00e+00	4.251	1	6	57
GO:0071013	catalytic step 2 spliceosome	5.49e-02	1.00e+00	4.153	1	5	61
GO:0006415	translational termination	5.66e-02	1.00e+00	4.106	1	2	63
GO:0006112	energy reserve metabolic process	5.84e-02	1.00e+00	4.061	1	3	65
GO:0001649	osteoblast differentiation	6.62e-02	1.00e+00	3.874	1	5	74
GO:0005938	cell cortex	6.88e-02	1.00e+00	3.817	1	6	77
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	7.48e-02	1.00e+00	3.691	1	5	84
GO:0044255	cellular lipid metabolic process	7.91e-02	1.00e+00	3.608	1	2	89
GO:0000086	G2/M transition of mitotic cell cycle	8.60e-02	1.00e+00	3.484	1	7	97
GO:0008017	microtubule binding	8.60e-02	1.00e+00	3.484	1	9	97
GO:0005516	calmodulin binding	8.77e-02	1.00e+00	3.454	1	4	99
GO:0034641	cellular nitrogen compound metabolic process	9.28e-02	1.00e+00	3.369	1	5	105
GO:0008543	fibroblast growth factor receptor signaling pathway	1.00e-01	1.00e+00	3.251	1	2	114
GO:0000287	magnesium ion binding	1.01e-01	1.00e+00	3.238	1	4	115
GO:0005739	mitochondrion	1.19e-01	1.00e+00	1.719	2	32	659
GO:0005759	mitochondrial matrix	1.21e-01	1.00e+00	2.965	1	7	139
GO:0007173	epidermal growth factor receptor signaling pathway	1.24e-01	1.00e+00	2.934	1	5	142
GO:0016071	mRNA metabolic process	1.46e-01	1.00e+00	2.674	1	10	170
GO:0000166	nucleotide binding	1.51e-01	1.00e+00	2.624	1	13	176
GO:0006412	translation	1.53e-01	1.00e+00	2.608	1	12	178
GO:0016070	RNA metabolic process	1.61e-01	1.00e+00	2.529	1	10	188
GO:0044822	poly(A) RNA binding	1.64e-01	1.00e+00	1.441	2	45	799
GO:0048011	neurotrophin TRK receptor signaling pathway	1.69e-01	1.00e+00	2.447	1	8	199
GO:0035556	intracellular signal transduction	1.69e-01	1.00e+00	2.447	1	5	199
GO:0070062	extracellular vesicular exosome	1.81e-01	1.00e+00	0.988	3	51	1641
GO:0005813	centrosome	1.83e-01	1.00e+00	2.322	1	10	217
GO:0043231	intracellular membrane-bounded organelle	1.84e-01	1.00e+00	2.315	1	8	218
GO:0042493	response to drug	1.87e-01	1.00e+00	2.289	1	4	222
GO:0005524	ATP binding	1.96e-01	1.00e+00	1.283	2	37	892
GO:0007411	axon guidance	1.98e-01	1.00e+00	2.195	1	8	237
GO:0046872	metal ion binding	2.10e-01	1.00e+00	1.216	2	24	934
GO:0005829	cytosol	2.18e-01	1.00e+00	0.865	3	88	1787
GO:0006508	proteolysis	2.19e-01	1.00e+00	2.039	1	11	264
GO:0055114	oxidation-reduction process	2.51e-01	1.00e+00	1.817	1	9	308
GO:0000278	mitotic cell cycle	2.55e-01	1.00e+00	1.789	1	28	314
GO:0055085	transmembrane transport	2.66e-01	1.00e+00	1.722	1	13	329
GO:0044267	cellular protein metabolic process	2.81e-01	1.00e+00	1.624	1	14	352
GO:0005783	endoplasmic reticulum	3.01e-01	1.00e+00	1.510	1	12	381
GO:0005730	nucleolus	3.11e-01	1.00e+00	0.834	2	74	1217
GO:0005515	protein binding	3.15e-01	1.00e+00	0.396	5	198	4124
GO:0005794	Golgi apparatus	3.24e-01	1.00e+00	1.387	1	6	415
GO:0016032	viral process	3.32e-01	1.00e+00	1.342	1	30	428
GO:0045087	innate immune response	3.47e-01	1.00e+00	1.263	1	12	452
GO:0016021	integral component of membrane	4.22e-01	1.00e+00	0.508	2	19	1526
GO:0007165	signal transduction	4.45e-01	1.00e+00	0.812	1	24	618
GO:0005737	cytoplasm	4.54e-01	1.00e+00	0.306	3	127	2633
GO:0008270	zinc ion binding	5.02e-01	1.00e+00	0.578	1	39	727
GO:0005634	nucleus	6.21e-01	1.00e+00	0.004	3	158	3246
GO:0005886	plasma membrane	8.37e-01	1.00e+00	-0.717	1	46	1784

chia-Fav

reg-snw-2744

Statistics

Genes (9)

Interactions (9)

Related GO terms (137)