reg-snw-10914

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.455	1.18e-08	7.79e-03	6.98e-03

chia-screen-data-Fav-reg-snw-10914 subnetwork

Genes (5)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
ETF1	2107	35	-2.829	2.503	6	-	Yes	Yes
CPSF3	51692	43	-2.686	2.503	31	-	Yes	Yes
SYNCRIP	10492	42	-2.401	2.503	144	TF	Yes	Yes
CLASP1	23332	10	-2.365	2.459	39	TF	Yes	-
[ PAPOLA ]	10914	9	-1.996	2.455	19	-	-	-

Interactions (4)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
ETF1	2107	SYNCRIP	10492	pd	<	reg.ITFP.txt: no annot
SYNCRIP	10492	PAPOLA	10914	pd	>	reg.ITFP.txt: no annot
PAPOLA	10914	CLASP1	23332	pd	<	reg.ITFP.txt: no annot
SYNCRIP	10492	CPSF3	51692	pd	>	reg.ITFP.txt: no annot

Related GO terms (83)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0003723	RNA binding	1.96e-06	1.91e-02	4.983	4	22	247
GO:0000398	mRNA splicing, via spliceosome	2.16e-05	2.11e-01	5.516	3	15	128
GO:0008380	RNA splicing	4.62e-05	4.51e-01	5.150	3	21	165
GO:0031124	mRNA 3'-end processing	1.24e-04	1.00e+00	6.802	2	4	35
GO:0006369	termination of RNA polymerase II transcription	1.46e-04	1.00e+00	6.684	2	5	38
GO:0016149	translation release factor activity, codon specific	5.12e-04	1.00e+00	10.931	1	1	1
GO:0008079	translation termination factor activity	5.12e-04	1.00e+00	10.931	1	1	1
GO:0031592	centrosomal corona	5.12e-04	1.00e+00	10.931	1	1	1
GO:0030529	ribonucleoprotein complex	6.85e-04	1.00e+00	5.574	2	5	82
GO:0031111	negative regulation of microtubule polymerization or depolymerization	1.02e-03	1.00e+00	9.931	1	1	2
GO:0051294	establishment of spindle orientation	1.02e-03	1.00e+00	9.931	1	1	2
GO:0030981	cortical microtubule cytoskeleton	1.02e-03	1.00e+00	9.931	1	1	2
GO:0003747	translation release factor activity	1.02e-03	1.00e+00	9.931	1	2	2
GO:0010467	gene expression	1.51e-03	1.00e+00	3.453	3	49	535
GO:0006449	regulation of translational termination	2.05e-03	1.00e+00	8.931	1	1	4
GO:0043631	RNA polyadenylation	2.05e-03	1.00e+00	8.931	1	1	4
GO:0097452	GAIT complex	2.05e-03	1.00e+00	8.931	1	2	4
GO:0043515	kinetochore binding	2.05e-03	1.00e+00	8.931	1	2	4
GO:0004652	polynucleotide adenylyltransferase activity	2.05e-03	1.00e+00	8.931	1	1	4
GO:0004521	endoribonuclease activity	2.56e-03	1.00e+00	8.610	1	1	5
GO:0010458	exit from mitosis	2.56e-03	1.00e+00	8.610	1	2	5
GO:0006398	histone mRNA 3'-end processing	2.56e-03	1.00e+00	8.610	1	1	5
GO:0071204	histone pre-mRNA 3'end processing complex	2.56e-03	1.00e+00	8.610	1	1	5
GO:0005828	kinetochore microtubule	2.56e-03	1.00e+00	8.610	1	1	5
GO:0070934	CRD-mediated mRNA stabilization	2.56e-03	1.00e+00	8.610	1	2	5
GO:0031023	microtubule organizing center organization	2.56e-03	1.00e+00	8.610	1	1	5
GO:0070937	CRD-mediated mRNA stability complex	3.07e-03	1.00e+00	8.347	1	2	6
GO:0008409	5'-3' exonuclease activity	3.58e-03	1.00e+00	8.124	1	2	7
GO:0034453	microtubule anchoring	4.60e-03	1.00e+00	7.762	1	1	9
GO:0006379	mRNA cleavage	4.60e-03	1.00e+00	7.762	1	2	9
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	4.60e-03	1.00e+00	7.762	1	3	9
GO:0008143	poly(A) binding	5.11e-03	1.00e+00	7.610	1	2	10
GO:0001578	microtubule bundle formation	5.11e-03	1.00e+00	7.610	1	2	10
GO:0051010	microtubule plus-end binding	5.62e-03	1.00e+00	7.472	1	2	11
GO:0007026	negative regulation of microtubule depolymerization	5.62e-03	1.00e+00	7.472	1	2	11
GO:0007020	microtubule nucleation	5.62e-03	1.00e+00	7.472	1	1	11
GO:0006479	protein methylation	5.62e-03	1.00e+00	7.472	1	2	11
GO:0005654	nucleoplasm	6.27e-03	1.00e+00	2.742	3	68	876
GO:0043022	ribosome binding	8.68e-03	1.00e+00	6.844	1	2	17
GO:0006378	mRNA polyadenylation	9.18e-03	1.00e+00	6.762	1	3	18
GO:0071346	cellular response to interferon-gamma	1.02e-02	1.00e+00	6.610	1	2	20
GO:0007163	establishment or maintenance of cell polarity	1.02e-02	1.00e+00	6.610	1	1	20
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	1.07e-02	1.00e+00	6.539	1	2	21
GO:0006366	transcription from RNA polymerase II promoter	1.13e-02	1.00e+00	3.518	2	23	341
GO:0005881	cytoplasmic microtubule	1.22e-02	1.00e+00	6.347	1	3	24
GO:0005876	spindle microtubule	1.22e-02	1.00e+00	6.347	1	4	24
GO:0030145	manganese ion binding	1.32e-02	1.00e+00	6.231	1	3	26
GO:0017148	negative regulation of translation	1.68e-02	1.00e+00	5.887	1	5	33
GO:0000226	microtubule cytoskeleton organization	1.83e-02	1.00e+00	5.762	1	1	36
GO:0006396	RNA processing	2.03e-02	1.00e+00	5.610	1	4	40
GO:0006406	mRNA export from nucleus	2.23e-02	1.00e+00	5.472	1	7	44
GO:0051301	cell division	2.48e-02	1.00e+00	5.317	1	2	49
GO:0000776	kinetochore	2.79e-02	1.00e+00	5.150	1	8	55
GO:0000777	condensed chromosome kinetochore	2.89e-02	1.00e+00	5.099	1	6	57
GO:0071013	catalytic step 2 spliceosome	3.09e-02	1.00e+00	5.001	1	5	61
GO:0006415	translational termination	3.19e-02	1.00e+00	4.954	1	2	63
GO:0001649	osteoblast differentiation	3.73e-02	1.00e+00	4.722	1	5	74
GO:0005938	cell cortex	3.88e-02	1.00e+00	4.665	1	6	77
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	4.23e-02	1.00e+00	4.539	1	5	84
GO:0000086	G2/M transition of mitotic cell cycle	4.87e-02	1.00e+00	4.332	1	7	97
GO:0008017	microtubule binding	4.87e-02	1.00e+00	4.332	1	9	97
GO:0044822	poly(A) RNA binding	5.66e-02	1.00e+00	2.289	2	45	799
GO:0000287	magnesium ion binding	5.75e-02	1.00e+00	4.086	1	4	115
GO:0016071	mRNA metabolic process	8.41e-02	1.00e+00	3.522	1	10	170
GO:0000166	nucleotide binding	8.69e-02	1.00e+00	3.472	1	13	176
GO:0006412	translation	8.79e-02	1.00e+00	3.456	1	12	178
GO:0016070	RNA metabolic process	9.26e-02	1.00e+00	3.377	1	10	188
GO:0005515	protein binding	1.05e-01	1.00e+00	0.922	4	198	4124
GO:0005813	centrosome	1.06e-01	1.00e+00	3.170	1	10	217
GO:0007411	axon guidance	1.16e-01	1.00e+00	3.043	1	8	237
GO:0016020	membrane	1.18e-01	1.00e+00	1.694	2	56	1207
GO:0000278	mitotic cell cycle	1.51e-01	1.00e+00	2.637	1	28	314
GO:0044267	cellular protein metabolic process	1.68e-01	1.00e+00	2.472	1	14	352
GO:0005783	endoplasmic reticulum	1.80e-01	1.00e+00	2.358	1	12	381
GO:0005794	Golgi apparatus	1.95e-01	1.00e+00	2.235	1	6	415
GO:0016032	viral process	2.01e-01	1.00e+00	2.190	1	30	428
GO:0005829	cytosol	2.28e-01	1.00e+00	1.128	2	88	1787
GO:0005524	ATP binding	3.81e-01	1.00e+00	1.131	1	37	892
GO:0046872	metal ion binding	3.95e-01	1.00e+00	1.064	1	24	934
GO:0005737	cytoplasm	4.09e-01	1.00e+00	0.569	2	127	2633
GO:0005730	nucleolus	4.86e-01	1.00e+00	0.682	1	74	1217
GO:0005634	nucleus	5.37e-01	1.00e+00	0.267	2	158	3246
GO:0070062	extracellular vesicular exosome	6.02e-01	1.00e+00	0.251	1	51	1641

chia-Fav

reg-snw-10914

Statistics

Genes (5)

Interactions (4)

Related GO terms (83)