Accession number | Name | Occurrences in all snw genes | Occurrences in all int/reg genes |
---|---|---|---|
GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 29 | 644 |
Gene Symbol | Entrez Gene ID | Frequency | chia-screen-data-Fav gene score | Best subnetwork score | Degree | Transcription factor | Chia-Hits Primary | Chia-Hits Secondary |
---|---|---|---|---|---|---|---|---|
GTF2A2 | 2958 | 9 | -1.938 | 2.377 | 41 | TF | - | - |
FOXM1 | 2305 | 9 | -1.669 | 2.412 | 210 | TF | - | - |
FUBP1 | 8880 | 5 | -2.414 | 2.389 | 18 | TF | Yes | Yes |
NCOA2 | 10499 | 4 | -1.786 | 2.326 | 95 | TF | - | - |
NFIB | 4781 | 2 | -1.505 | 2.307 | 40 | TF | - | - |
PIAS2 | 9063 | 2 | -1.136 | 2.308 | 22 | TF | - | - |
TAF2 | 6873 | 2 | -2.384 | 2.380 | 6 | TF | Yes | Yes |
MAPK14 | 1432 | 2 | -1.902 | 2.386 | 32 | - | - | - |
MED13 | 9969 | 2 | -2.073 | 2.225 | 2 | - | Yes | - |
GATA2 | 2624 | 2 | -1.645 | 2.340 | 126 | TF | - | - |
SMARCA4 | 6597 | 2 | -1.381 | 2.251 | 114 | TF | - | - |
NFIC | 4782 | 2 | -1.844 | 2.280 | 44 | TF | - | - |
SMARCA2 | 6595 | 1 | -1.109 | 2.241 | 21 | TF | - | - |
GABPA | 2551 | 1 | -1.442 | 2.238 | 58 | TF | - | - |
NFIA | 4774 | 1 | -1.458 | 2.307 | 80 | TF | - | - |
LDB2 | 9079 | 1 | -2.380 | 2.241 | 6 | - | Yes | - |
OGT | 8473 | 1 | -1.022 | 2.200 | 12 | TF | - | - |
HDAC1 | 3065 | 1 | -1.712 | 2.232 | 13 | TF | - | - |
MED14 | 9282 | 1 | -2.420 | 2.207 | 9 | - | Yes | - |
ARMCX3 | 51566 | 1 | -1.618 | 2.348 | 5 | TF | - | - |
NFIX | 4784 | 1 | -1.772 | 2.202 | 6 | TF | - | - |
WWTR1 | 25937 | 1 | -1.886 | 2.204 | 43 | TF | - | - |
TCF3 | 6929 | 1 | -1.227 | 2.204 | 98 | TF | - | - |
ERCC2 | 2068 | 1 | -1.421 | 2.379 | 12 | TF | - | - |
GRIN1 | 2902 | 1 | -1.291 | 2.207 | 3 | - | - | - |
NFATC2IP | 84901 | 1 | -1.304 | 2.285 | 4 | - | - | - |
RNF10 | 9921 | 1 | -1.461 | 2.335 | 5 | TF | - | - |
GLI1 | 2735 | 1 | -1.344 | 2.204 | 16 | TF | - | - |
MEN1 | 4221 | 1 | -1.226 | 2.240 | 13 | - | - | - |
Subnetwork ID | chia-screen-data-Fav score | Size | Highlighted genes | Hypergeometric test | Corrected p-value | Enrichment ratio | Occurrences in subnetwork |
---|---|---|---|---|---|---|---|
reg-snw-8888 | 2.326 | 13 | 11 | 5.88e-01 | 1.00e+00 | 0.222 | 1 |
reg-snw-10576 | 2.377 | 20 | 13 | 3.84e-01 | 1.00e+00 | 0.601 | 2 |
reg-snw-1175 | 2.367 | 11 | 8 | 5.28e-01 | 1.00e+00 | 0.463 | 1 |
reg-snw-284695 | 2.380 | 7 | 6 | 3.80e-01 | 1.00e+00 | 1.115 | 1 |
reg-snw-7090 | 2.251 | 25 | 16 | 4.98e-01 | 1.00e+00 | 0.279 | 2 |
reg-snw-11051 | 2.307 | 25 | 17 | 4.98e-01 | 1.00e+00 | 0.279 | 2 |
reg-snw-27338 | 2.342 | 19 | 13 | 7.27e-01 | 1.00e+00 | -0.325 | 1 |
reg-snw-2551 | 2.238 | 10 | 7 | 4.95e-01 | 1.00e+00 | 0.601 | 1 |
reg-snw-4221 | 2.240 | 13 | 9 | 2.10e-01 | 1.00e+00 | 1.222 | 2 |
reg-snw-2783 | 2.192 | 16 | 9 | 6.65e-01 | 1.00e+00 | -0.078 | 1 |
reg-snw-51566 | 2.348 | 8 | 6 | 4.21e-01 | 1.00e+00 | 0.922 | 1 |
reg-snw-2314 | 2.213 | 10 | 9 | 4.95e-01 | 1.00e+00 | 0.601 | 1 |
reg-snw-9631 | 2.312 | 20 | 15 | 7.45e-01 | 1.00e+00 | -0.399 | 1 |
reg-snw-25996 | 2.217 | 21 | 16 | 7.62e-01 | 1.00e+00 | -0.470 | 1 |
reg-snw-8562 | 2.263 | 32 | 24 | 8.88e-01 | 1.00e+00 | -1.078 | 1 |
reg-snw-6051 | 2.223 | 15 | 9 | 6.41e-01 | 1.00e+00 | 0.016 | 1 |
reg-snw-9063 | 2.308 | 16 | 10 | 2.85e-01 | 1.00e+00 | 0.922 | 2 |
reg-snw-51060 | 2.225 | 29 | 24 | 8.62e-01 | 1.00e+00 | -0.935 | 1 |
reg-snw-7334 | 2.284 | 9 | 7 | 4.59e-01 | 1.00e+00 | 0.753 | 1 |
reg-snw-2068 | 2.379 | 6 | 4 | 3.36e-01 | 1.00e+00 | 1.338 | 1 |
reg-snw-80830 | 2.230 | 19 | 11 | 7.27e-01 | 1.00e+00 | -0.325 | 1 |
reg-snw-22948 | 2.389 | 17 | 13 | 3.10e-01 | 1.00e+00 | 0.835 | 2 |
reg-snw-1586 | 2.229 | 5 | 2 | 2.89e-01 | 1.00e+00 | 1.601 | 1 |
reg-snw-7543 | 2.200 | 20 | 13 | 1.41e-01 | 1.00e+00 | 1.186 | 3 |
reg-snw-4781 | 2.202 | 8 | 5 | 9.33e-02 | 1.00e+00 | 1.922 | 2 |
reg-snw-1153 | 2.386 | 12 | 9 | 5.59e-01 | 1.00e+00 | 0.338 | 1 |
reg-snw-463 | 2.412 | 6 | 4 | 3.36e-01 | 1.00e+00 | 1.338 | 1 |
reg-snw-6790 | 2.315 | 19 | 15 | 7.27e-01 | 1.00e+00 | -0.325 | 1 |
reg-snw-2902 | 2.207 | 6 | 3 | 3.36e-01 | 1.00e+00 | 1.338 | 1 |
reg-snw-2624 | 2.234 | 6 | 5 | 3.36e-01 | 1.00e+00 | 1.338 | 1 |
reg-snw-10499 | 2.282 | 7 | 6 | 3.80e-01 | 1.00e+00 | 1.115 | 1 |
reg-snw-83998 | 2.204 | 14 | 9 | 6.02e-02 | 1.00e+00 | 1.700 | 3 |
reg-snw-10362 | 2.239 | 13 | 8 | 5.88e-01 | 1.00e+00 | 0.222 | 1 |
reg-snw-6874 | 2.285 | 17 | 13 | 6.87e-01 | 1.00e+00 | -0.165 | 1 |
reg-snw-1062 | 2.228 | 15 | 12 | 6.41e-01 | 1.00e+00 | 0.016 | 1 |
reg-snw-5682 | 2.230 | 13 | 8 | 5.88e-01 | 1.00e+00 | 0.222 | 1 |
reg-snw-3145 | 2.226 | 23 | 17 | 7.92e-01 | 1.00e+00 | -0.601 | 1 |
reg-snw-1111 | 2.288 | 22 | 16 | 7.77e-01 | 1.00e+00 | -0.537 | 1 |
reg-snw-23310 | 2.232 | 10 | 7 | 4.95e-01 | 1.00e+00 | 0.601 | 1 |
reg-snw-84108 | 2.199 | 30 | 22 | 8.71e-01 | 1.00e+00 | -0.984 | 1 |
reg-snw-9921 | 2.335 | 6 | 3 | 3.36e-01 | 1.00e+00 | 1.338 | 1 |
reg-snw-6595 | 2.241 | 15 | 10 | 2.60e-01 | 1.00e+00 | 1.016 | 2 |
reg-snw-23254 | 2.340 | 6 | 4 | 3.36e-01 | 1.00e+00 | 1.338 | 1 |
reg-snw-5034 | 2.298 | 13 | 9 | 5.88e-01 | 1.00e+00 | 0.222 | 1 |
reg-snw-1452 | 2.207 | 7 | 5 | 7.31e-02 | 1.00e+00 | 2.115 | 2 |
reg-snw-2335 | 2.280 | 7 | 4 | 7.31e-02 | 1.00e+00 | 2.115 | 2 |