GO:0045944

positive regulation of transcription from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0045944positive regulation of transcription from RNA polymerase II promoter29644

Term information on AmiGO 2: GO:0045944

Genes (29)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Transcription factor Chia-Hits Primary Chia-Hits Secondary
GTF2A2 2958 9-1.9382.37741TF--
FOXM1 2305 9-1.6692.412210TF--
FUBP1 8880 5-2.4142.38918TFYesYes
NCOA2 10499 4-1.7862.32695TF--
NFIB 4781 2-1.5052.30740TF--
PIAS2 9063 2-1.1362.30822TF--
TAF2 6873 2-2.3842.3806TFYesYes
MAPK14 1432 2-1.9022.38632---
MED13 9969 2-2.0732.2252-Yes-
GATA2 2624 2-1.6452.340126TF--
SMARCA4 6597 2-1.3812.251114TF--
NFIC 4782 2-1.8442.28044TF--
SMARCA2 6595 1-1.1092.24121TF--
GABPA 2551 1-1.4422.23858TF--
NFIA 4774 1-1.4582.30780TF--
LDB2 9079 1-2.3802.2416-Yes-
OGT 8473 1-1.0222.20012TF--
HDAC1 3065 1-1.7122.23213TF--
MED14 9282 1-2.4202.2079-Yes-
ARMCX3 51566 1-1.6182.3485TF--
NFIX 4784 1-1.7722.2026TF--
WWTR1 25937 1-1.8862.20443TF--
TCF3 6929 1-1.2272.20498TF--
ERCC2 2068 1-1.4212.37912TF--
GRIN1 2902 1-1.2912.2073---
NFATC2IP 84901 1-1.3042.2854---
RNF10 9921 1-1.4612.3355TF--
GLI1 2735 1-1.3442.20416TF--
MEN1 4221 1-1.2262.24013---

Subnetworks (46)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
reg-snw-8888 2.326 13 11 5.88e-01 1.00e+00 0.222 1
reg-snw-10576 2.377 20 13 3.84e-01 1.00e+00 0.601 2
reg-snw-1175 2.367 11 8 5.28e-01 1.00e+00 0.463 1
reg-snw-284695 2.380 7 6 3.80e-01 1.00e+00 1.115 1
reg-snw-7090 2.251 25 16 4.98e-01 1.00e+00 0.279 2
reg-snw-11051 2.307 25 17 4.98e-01 1.00e+00 0.279 2
reg-snw-27338 2.342 19 13 7.27e-01 1.00e+00 -0.325 1
reg-snw-2551 2.238 10 7 4.95e-01 1.00e+00 0.601 1
reg-snw-4221 2.240 13 9 2.10e-01 1.00e+00 1.222 2
reg-snw-2783 2.192 16 9 6.65e-01 1.00e+00 -0.078 1
reg-snw-51566 2.348 8 6 4.21e-01 1.00e+00 0.922 1
reg-snw-2314 2.213 10 9 4.95e-01 1.00e+00 0.601 1
reg-snw-9631 2.312 20 15 7.45e-01 1.00e+00 -0.399 1
reg-snw-25996 2.217 21 16 7.62e-01 1.00e+00 -0.470 1
reg-snw-8562 2.263 32 24 8.88e-01 1.00e+00 -1.078 1
reg-snw-6051 2.223 15 9 6.41e-01 1.00e+00 0.016 1
reg-snw-9063 2.308 16 10 2.85e-01 1.00e+00 0.922 2
reg-snw-51060 2.225 29 24 8.62e-01 1.00e+00 -0.935 1
reg-snw-7334 2.284 9 7 4.59e-01 1.00e+00 0.753 1
reg-snw-2068 2.379 6 4 3.36e-01 1.00e+00 1.338 1
reg-snw-80830 2.230 19 11 7.27e-01 1.00e+00 -0.325 1
reg-snw-22948 2.389 17 13 3.10e-01 1.00e+00 0.835 2
reg-snw-1586 2.229 5 2 2.89e-01 1.00e+00 1.601 1
reg-snw-7543 2.200 20 13 1.41e-01 1.00e+00 1.186 3
reg-snw-4781 2.202 8 5 9.33e-02 1.00e+00 1.922 2
reg-snw-1153 2.386 12 9 5.59e-01 1.00e+00 0.338 1
reg-snw-463 2.412 6 4 3.36e-01 1.00e+00 1.338 1
reg-snw-6790 2.315 19 15 7.27e-01 1.00e+00 -0.325 1
reg-snw-2902 2.207 6 3 3.36e-01 1.00e+00 1.338 1
reg-snw-2624 2.234 6 5 3.36e-01 1.00e+00 1.338 1
reg-snw-10499 2.282 7 6 3.80e-01 1.00e+00 1.115 1
reg-snw-83998 2.204 14 9 6.02e-02 1.00e+00 1.700 3
reg-snw-10362 2.239 13 8 5.88e-01 1.00e+00 0.222 1
reg-snw-6874 2.285 17 13 6.87e-01 1.00e+00 -0.165 1
reg-snw-1062 2.228 15 12 6.41e-01 1.00e+00 0.016 1
reg-snw-5682 2.230 13 8 5.88e-01 1.00e+00 0.222 1
reg-snw-3145 2.226 23 17 7.92e-01 1.00e+00 -0.601 1
reg-snw-1111 2.288 22 16 7.77e-01 1.00e+00 -0.537 1
reg-snw-23310 2.232 10 7 4.95e-01 1.00e+00 0.601 1
reg-snw-84108 2.199 30 22 8.71e-01 1.00e+00 -0.984 1
reg-snw-9921 2.335 6 3 3.36e-01 1.00e+00 1.338 1
reg-snw-6595 2.241 15 10 2.60e-01 1.00e+00 1.016 2
reg-snw-23254 2.340 6 4 3.36e-01 1.00e+00 1.338 1
reg-snw-5034 2.298 13 9 5.88e-01 1.00e+00 0.222 1
reg-snw-1452 2.207 7 5 7.31e-02 1.00e+00 2.115 2
reg-snw-2335 2.280 7 4 7.31e-02 1.00e+00 2.115 2