reg-snw-2902

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.207	2.64e-07	4.48e-02	3.40e-02

chia-screen-data-Fav-reg-snw-2902 subnetwork

Genes (6)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
PDLIM7	9260	2	-1.779	2.373	19	TF	-	-
CCDC108	255101	1	-1.719	2.207	19	-	-	-
C16orf13	84326	12	-2.090	2.492	36	-	Yes	-
GPS1	2873	86	-3.621	2.689	36	TF	Yes	Yes
PHB	5245	82	-2.743	2.689	36	-	Yes	Yes
[ GRIN1 ]	2902	1	-1.291	2.207	3	-	-	-

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
GRIN1	2902	PDLIM7	9260	pd	<	reg.ITFP.txt: no annot
PDLIM7	9260	C16orf13	84326	pd	>	reg.ITFP.txt: no annot
GPS1	2873	C16orf13	84326	pd	>	reg.ITFP.txt: no annot
GPS1	2873	PHB	5245	pd	>	reg.ITFP.txt: no annot
PDLIM7	9260	CCDC108	255101	pd	>	reg.ITFP.txt: no annot

Related GO terms (118)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0018964	propylene metabolic process	6.14e-04	1.00e+00	10.668	1	1	1
GO:0021586	pons maturation	6.14e-04	1.00e+00	10.668	1	1	1
GO:0043083	synaptic cleft	6.14e-04	1.00e+00	10.668	1	1	1
GO:0008355	olfactory learning	1.23e-03	1.00e+00	9.668	1	1	2
GO:0022843	voltage-gated cation channel activity	1.84e-03	1.00e+00	9.083	1	1	3
GO:0060179	male mating behavior	2.46e-03	1.00e+00	8.668	1	1	4
GO:0035254	glutamate receptor binding	2.46e-03	1.00e+00	8.668	1	1	4
GO:0043576	regulation of respiratory gaseous exchange	2.46e-03	1.00e+00	8.668	1	1	4
GO:0060992	response to fungicide	2.46e-03	1.00e+00	8.668	1	2	4
GO:0042165	neurotransmitter binding	2.46e-03	1.00e+00	8.668	1	1	4
GO:0071287	cellular response to manganese ion	3.07e-03	1.00e+00	8.347	1	1	5
GO:2000323	negative regulation of glucocorticoid receptor signaling pathway	3.07e-03	1.00e+00	8.347	1	1	5
GO:0001661	conditioned taste aversion	3.07e-03	1.00e+00	8.347	1	1	5
GO:0050847	progesterone receptor signaling pathway	3.68e-03	1.00e+00	8.083	1	2	6
GO:0004972	N-methyl-D-aspartate selective glutamate receptor activity	3.68e-03	1.00e+00	8.083	1	1	6
GO:0051963	regulation of synapse assembly	4.29e-03	1.00e+00	7.861	1	1	7
GO:0010944	negative regulation of transcription by competitive promoter binding	4.91e-03	1.00e+00	7.668	1	1	8
GO:0010388	cullin deneddylation	4.91e-03	1.00e+00	7.668	1	4	8
GO:0060134	prepulse inhibition	4.91e-03	1.00e+00	7.668	1	1	8
GO:0017146	N-methyl-D-aspartate selective glutamate receptor complex	4.91e-03	1.00e+00	7.668	1	1	8
GO:0016595	glutamate binding	4.91e-03	1.00e+00	7.668	1	1	8
GO:0071354	cellular response to interleukin-6	5.52e-03	1.00e+00	7.499	1	1	9
GO:0016594	glycine binding	5.52e-03	1.00e+00	7.499	1	1	9
GO:0097481	neuronal postsynaptic density	5.52e-03	1.00e+00	7.499	1	1	9
GO:0001967	suckling behavior	6.13e-03	1.00e+00	7.347	1	4	10
GO:0005095	GTPase inhibitor activity	6.13e-03	1.00e+00	7.347	1	1	10
GO:0032590	dendrite membrane	6.13e-03	1.00e+00	7.347	1	1	10
GO:0019899	enzyme binding	6.52e-03	1.00e+00	3.954	2	7	210
GO:0060766	negative regulation of androgen receptor signaling pathway	6.74e-03	1.00e+00	7.209	1	4	11
GO:0005234	extracellular-glutamate-gated ion channel activity	6.74e-03	1.00e+00	7.209	1	1	11
GO:0048814	regulation of dendrite morphogenesis	6.74e-03	1.00e+00	7.209	1	1	11
GO:2000463	positive regulation of excitatory postsynaptic membrane potential	7.96e-03	1.00e+00	6.968	1	1	13
GO:0050770	regulation of axonogenesis	7.96e-03	1.00e+00	6.968	1	3	13
GO:0060076	excitatory synapse	8.57e-03	1.00e+00	6.861	1	1	14
GO:0055074	calcium ion homeostasis	8.57e-03	1.00e+00	6.861	1	1	14
GO:0016575	histone deacetylation	8.57e-03	1.00e+00	6.861	1	2	14
GO:0000188	inactivation of MAPK activity	9.18e-03	1.00e+00	6.762	1	1	15
GO:0048169	regulation of long-term neuronal synaptic plasticity	9.79e-03	1.00e+00	6.668	1	1	16
GO:0006812	cation transport	9.79e-03	1.00e+00	6.668	1	1	16
GO:0043278	response to morphine	1.04e-02	1.00e+00	6.581	1	2	17
GO:0035235	ionotropic glutamate receptor signaling pathway	1.04e-02	1.00e+00	6.581	1	1	17
GO:0071897	DNA biosynthetic process	1.22e-02	1.00e+00	6.347	1	2	20
GO:0035249	synaptic transmission, glutamatergic	1.22e-02	1.00e+00	6.347	1	1	20
GO:0007616	long-term memory	1.22e-02	1.00e+00	6.347	1	2	20
GO:0060079	regulation of excitatory postsynaptic membrane potential	1.28e-02	1.00e+00	6.276	1	1	21
GO:0051262	protein tetramerization	1.41e-02	1.00e+00	6.145	1	2	23
GO:0001975	response to amphetamine	1.41e-02	1.00e+00	6.145	1	1	23
GO:0008180	COP9 signalosome	1.47e-02	1.00e+00	6.083	1	6	24
GO:0007585	respiratory gaseous exchange	1.53e-02	1.00e+00	6.025	1	1	25
GO:0005262	calcium channel activity	1.53e-02	1.00e+00	6.025	1	1	25
GO:0035176	social behavior	1.71e-02	1.00e+00	5.861	1	1	28
GO:0021987	cerebral cortex development	1.83e-02	1.00e+00	5.762	1	2	30
GO:0008542	visual learning	1.83e-02	1.00e+00	5.762	1	1	30
GO:0043195	terminal bouton	1.89e-02	1.00e+00	5.714	1	2	31
GO:0008344	adult locomotory behavior	2.01e-02	1.00e+00	5.624	1	1	33
GO:0007254	JNK cascade	2.07e-02	1.00e+00	5.581	1	1	34
GO:0019233	sensory perception of pain	2.13e-02	1.00e+00	5.539	1	1	35
GO:0042391	regulation of membrane potential	2.19e-02	1.00e+00	5.499	1	1	36
GO:0051592	response to calcium ion	2.25e-02	1.00e+00	5.459	1	1	37
GO:0048511	rhythmic process	2.31e-02	1.00e+00	5.421	1	5	38
GO:0008021	synaptic vesicle	2.43e-02	1.00e+00	5.347	1	2	40
GO:0045669	positive regulation of osteoblast differentiation	2.49e-02	1.00e+00	5.311	1	2	41
GO:0001725	stress fiber	2.79e-02	1.00e+00	5.145	1	6	46
GO:0043197	dendritic spine	3.09e-02	1.00e+00	4.996	1	1	51
GO:0006898	receptor-mediated endocytosis	3.15e-02	1.00e+00	4.968	1	1	52
GO:0001726	ruffle	3.21e-02	1.00e+00	4.941	1	2	53
GO:0001503	ossification	3.39e-02	1.00e+00	4.861	1	2	56
GO:0006874	cellular calcium ion homeostasis	3.45e-02	1.00e+00	4.836	1	3	57
GO:0042826	histone deacetylase binding	3.51e-02	1.00e+00	4.810	1	5	58
GO:0045471	response to ethanol	4.11e-02	1.00e+00	4.581	1	1	68
GO:0030308	negative regulation of cell growth	4.23e-02	1.00e+00	4.539	1	3	70
GO:0070588	calcium ion transmembrane transport	4.23e-02	1.00e+00	4.539	1	1	70
GO:0014069	postsynaptic density	4.40e-02	1.00e+00	4.479	1	1	73
GO:0005887	integral component of plasma membrane	4.43e-02	1.00e+00	2.501	2	8	575
GO:0001649	osteoblast differentiation	4.46e-02	1.00e+00	4.459	1	5	74
GO:0034765	regulation of ion transmembrane transport	4.46e-02	1.00e+00	4.459	1	1	74
GO:0045202	synapse	4.99e-02	1.00e+00	4.293	1	3	83
GO:0043524	negative regulation of neuron apoptotic process	5.11e-02	1.00e+00	4.259	1	2	85
GO:0030036	actin cytoskeleton organization	5.41e-02	1.00e+00	4.177	1	4	90
GO:0034220	ion transmembrane transport	5.76e-02	1.00e+00	4.083	1	2	96
GO:0005516	calmodulin binding	5.93e-02	1.00e+00	4.039	1	4	99
GO:0005198	structural molecule activity	6.05e-02	1.00e+00	4.010	1	4	101
GO:0045211	postsynaptic membrane	6.57e-02	1.00e+00	3.887	1	1	110
GO:0042981	regulation of apoptotic process	6.69e-02	1.00e+00	3.861	1	4	112
GO:0043005	neuron projection	6.75e-02	1.00e+00	3.848	1	6	113
GO:0007049	cell cycle	6.86e-02	1.00e+00	3.823	1	8	115
GO:0015629	actin cytoskeleton	8.07e-02	1.00e+00	3.581	1	5	136
GO:0044212	transcription regulatory region DNA binding	8.47e-02	1.00e+00	3.509	1	13	143
GO:0030425	dendrite	9.78e-02	1.00e+00	3.293	1	2	166
GO:0005743	mitochondrial inner membrane	1.15e-01	1.00e+00	3.046	1	9	197
GO:0043065	positive regulation of apoptotic process	1.18e-01	1.00e+00	3.010	1	7	202
GO:0030154	cell differentiation	1.19e-01	1.00e+00	2.996	1	5	204
GO:0007275	multicellular organismal development	1.25e-01	1.00e+00	2.927	1	9	214
GO:0007268	synaptic transmission	1.25e-01	1.00e+00	2.927	1	7	214
GO:0030054	cell junction	1.27e-01	1.00e+00	2.900	1	5	218
GO:0046982	protein heterodimerization activity	1.52e-01	1.00e+00	2.619	1	11	265
GO:0008285	negative regulation of cell proliferation	1.59e-01	1.00e+00	2.555	1	11	277
GO:0005925	focal adhesion	1.61e-01	1.00e+00	2.529	1	14	282
GO:0009986	cell surface	1.66e-01	1.00e+00	2.484	1	5	291
GO:0045892	negative regulation of transcription, DNA-templated	1.80e-01	1.00e+00	2.360	1	17	317
GO:0005509	calcium ion binding	1.97e-01	1.00e+00	2.213	1	9	351
GO:0005737	cytoplasm	2.02e-01	1.00e+00	0.891	3	127	2633
GO:0045893	positive regulation of transcription, DNA-templated	2.10e-01	1.00e+00	2.110	1	21	377
GO:0005515	protein binding	2.11e-01	1.00e+00	0.659	4	198	4124
GO:0005783	endoplasmic reticulum	2.12e-01	1.00e+00	2.095	1	12	381
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	2.49e-01	1.00e+00	1.836	1	29	456
GO:0005634	nucleus	3.18e-01	1.00e+00	0.589	3	158	3246
GO:0007165	signal transduction	3.25e-01	1.00e+00	1.397	1	24	618
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	3.36e-01	1.00e+00	1.338	1	29	644
GO:0005739	mitochondrion	3.43e-01	1.00e+00	1.304	1	32	659
GO:0006355	regulation of transcription, DNA-templated	3.66e-01	1.00e+00	1.187	1	31	715
GO:0008270	zinc ion binding	3.71e-01	1.00e+00	1.163	1	39	727
GO:0044822	poly(A) RNA binding	4.01e-01	1.00e+00	1.026	1	45	799
GO:0005654	nucleoplasm	4.31e-01	1.00e+00	0.894	1	68	876
GO:0016020	membrane	5.47e-01	1.00e+00	0.431	1	56	1207
GO:0016021	integral component of membrane	6.39e-01	1.00e+00	0.093	1	19	1526
GO:0070062	extracellular vesicular exosome	6.69e-01	1.00e+00	-0.012	1	51	1641
GO:0005886	plasma membrane	7.02e-01	1.00e+00	-0.132	1	46	1784

chia-Fav

reg-snw-2902

Statistics

Genes (6)

Interactions (5)

Related GO terms (118)