reg-snw-908

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.244	1.71e-07	3.57e-02	2.74e-02

chia-screen-data-Fav-reg-snw-908 subnetwork

Genes (11)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
NDUFA4L2	56901	44	-2.477	2.459	21	-	Yes	-
FBXL6	26233	28	-2.253	2.689	22	-	Yes	-
CENPA	1058	27	-2.185	2.393	205	TF	Yes	-
SYNCRIP	10492	42	-2.401	2.503	144	TF	Yes	Yes
SUV39H2	79723	27	-2.307	2.410	21	-	Yes	Yes
FTSJ1	24140	43	-2.463	2.689	35	-	Yes	Yes
[ CCT6A ]	908	1	-1.666	2.244	45	-	-	-
EIF2S1	1965	5	-1.801	2.410	63	TF	-	-
ETF1	2107	35	-2.829	2.503	6	-	Yes	Yes
GSPT1	2935	32	-2.313	2.503	17	-	Yes	Yes
NOLC1	9221	15	-1.985	2.503	113	TF	-	-

Interactions (13)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
EIF2S1	1965	ETF1	2107	pd	>	reg.ITFP.txt: no annot
CENPA	1058	FBXL6	26233	pd	>	reg.ITFP.txt: no annot
NOLC1	9221	FTSJ1	24140	pd	>	reg.ITFP.txt: no annot
GSPT1	2935	NOLC1	9221	pd	<	reg.ITFP.txt: no annot
CENPA	1058	SUV39H2	79723	pd	>	reg.ITFP.txt: no annot
ETF1	2107	SYNCRIP	10492	pd	<	reg.ITFP.txt: no annot
GSPT1	2935	SYNCRIP	10492	pd	<	reg.ITFP.txt: no annot
CCT6A	908	NOLC1	9221	pd	<	reg.ITFP.txt: no annot
EIF2S1	1965	SYNCRIP	10492	pd	<>	reg.ITFP.txt: no annot
CCT6A	908	CENPA	1058	pd	<	reg.ITFP.txt: no annot
SYNCRIP	10492	SUV39H2	79723	pd	>	reg.ITFP.txt: no annot
CCT6A	908	EIF2S1	1965	pd	<	reg.ITFP.txt: no annot
CENPA	1058	NDUFA4L2	56901	pd	>	reg.ITFP.txt: no annot

Related GO terms (106)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0003747	translation release factor activity	1.15e-06	1.13e-02	9.794	2	2	2
GO:0006479	protein methylation	6.31e-05	6.16e-01	7.335	2	2	11
GO:0044822	poly(A) RNA binding	9.51e-05	9.28e-01	2.737	6	45	799
GO:0043022	ribosome binding	1.55e-04	1.00e+00	6.707	2	2	17
GO:0000775	chromosome, centromeric region	9.24e-04	1.00e+00	5.436	2	6	41
GO:0000939	condensed chromosome inner kinetochore	1.13e-03	1.00e+00	9.794	1	1	1
GO:0016149	translation release factor activity, codon specific	1.13e-03	1.00e+00	9.794	1	1	1
GO:0008079	translation termination factor activity	1.13e-03	1.00e+00	9.794	1	1	1
GO:0002128	tRNA nucleoside ribose methylation	1.13e-03	1.00e+00	9.794	1	1	1
GO:0008175	tRNA methyltransferase activity	1.13e-03	1.00e+00	9.794	1	1	1
GO:0006415	translational termination	2.17e-03	1.00e+00	4.817	2	2	63
GO:0043558	regulation of translational initiation in response to stress	2.25e-03	1.00e+00	8.794	1	1	2
GO:0005850	eukaryotic translation initiation factor 2 complex	3.38e-03	1.00e+00	8.209	1	2	3
GO:0036123	histone H3-K9 dimethylation	3.38e-03	1.00e+00	8.209	1	1	3
GO:0000778	condensed nuclear chromosome kinetochore	3.38e-03	1.00e+00	8.209	1	2	3
GO:0071459	protein localization to chromosome, centromeric region	3.38e-03	1.00e+00	8.209	1	1	3
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	3.82e-03	1.00e+00	4.402	2	5	84
GO:0006449	regulation of translational termination	4.50e-03	1.00e+00	7.794	1	1	4
GO:0007000	nucleolus organization	4.50e-03	1.00e+00	7.794	1	1	4
GO:0006333	chromatin assembly or disassembly	4.50e-03	1.00e+00	7.794	1	1	4
GO:0036124	histone H3-K9 trimethylation	4.50e-03	1.00e+00	7.794	1	2	4
GO:0097452	GAIT complex	4.50e-03	1.00e+00	7.794	1	2	4
GO:0005851	eukaryotic translation initiation factor 2B complex	4.50e-03	1.00e+00	7.794	1	2	4
GO:0071204	histone pre-mRNA 3'end processing complex	5.62e-03	1.00e+00	7.472	1	1	5
GO:0070934	CRD-mediated mRNA stabilization	5.62e-03	1.00e+00	7.472	1	2	5
GO:0044267	cellular protein metabolic process	6.18e-03	1.00e+00	2.920	3	14	352
GO:0002181	cytoplasmic translation	6.74e-03	1.00e+00	7.209	1	1	6
GO:0070937	CRD-mediated mRNA stability complex	6.74e-03	1.00e+00	7.209	1	2	6
GO:0042754	negative regulation of circadian rhythm	6.74e-03	1.00e+00	7.209	1	2	6
GO:0046974	histone methyltransferase activity (H3-K9 specific)	6.74e-03	1.00e+00	7.209	1	1	6
GO:0002199	zona pellucida receptor complex	7.86e-03	1.00e+00	6.987	1	4	7
GO:0007140	male meiosis	7.86e-03	1.00e+00	6.987	1	1	7
GO:0000780	condensed nuclear chromosome, centromeric region	7.86e-03	1.00e+00	6.987	1	1	7
GO:0005832	chaperonin-containing T-complex	7.86e-03	1.00e+00	6.987	1	4	7
GO:0051382	kinetochore assembly	7.86e-03	1.00e+00	6.987	1	2	7
GO:0008143	poly(A) binding	1.12e-02	1.00e+00	6.472	1	2	10
GO:0000132	establishment of mitotic spindle orientation	1.34e-02	1.00e+00	6.209	1	2	12
GO:0006412	translation	1.63e-02	1.00e+00	3.318	2	12	178
GO:0007339	binding of sperm to zona pellucida	1.68e-02	1.00e+00	5.887	1	4	15
GO:0005525	GTP binding	1.98e-02	1.00e+00	3.172	2	12	197
GO:0005844	polysome	2.12e-02	1.00e+00	5.546	1	2	19
GO:0071346	cellular response to interferon-gamma	2.23e-02	1.00e+00	5.472	1	2	20
GO:0005720	nuclear heterochromatin	2.23e-02	1.00e+00	5.472	1	3	20
GO:0034080	CENP-A containing nucleosome assembly	2.23e-02	1.00e+00	5.472	1	2	20
GO:0051084	'de novo' posttranslational protein folding	2.45e-02	1.00e+00	5.335	1	4	22
GO:0000976	transcription regulatory region sequence-specific DNA binding	2.78e-02	1.00e+00	5.150	1	3	25
GO:0010494	cytoplasmic stress granule	2.89e-02	1.00e+00	5.094	1	4	26
GO:0003723	RNA binding	3.02e-02	1.00e+00	2.846	2	22	247
GO:0001669	acrosomal vesicle	3.11e-02	1.00e+00	4.987	1	1	28
GO:0003682	chromatin binding	3.13e-02	1.00e+00	2.817	2	15	252
GO:0015030	Cajal body	3.55e-02	1.00e+00	4.794	1	3	32
GO:0017148	negative regulation of translation	3.66e-02	1.00e+00	4.750	1	5	33
GO:0000786	nucleosome	3.77e-02	1.00e+00	4.707	1	2	34
GO:0044297	cell body	3.87e-02	1.00e+00	4.665	1	5	35
GO:0003743	translation initiation factor activity	4.09e-02	1.00e+00	4.585	1	8	37
GO:0005515	protein binding	4.12e-02	1.00e+00	0.784	8	198	4124
GO:0048511	rhythmic process	4.20e-02	1.00e+00	4.546	1	5	38
GO:0006396	RNA processing	4.42e-02	1.00e+00	4.472	1	4	40
GO:0006987	activation of signaling protein activity involved in unfolded protein response	5.17e-02	1.00e+00	4.239	1	1	47
GO:0006334	nucleosome assembly	5.60e-02	1.00e+00	4.122	1	4	51
GO:0006338	chromatin remodeling	6.03e-02	1.00e+00	4.013	1	7	55
GO:0000785	chromatin	6.45e-02	1.00e+00	3.911	1	6	59
GO:0030968	endoplasmic reticulum unfolded protein response	6.66e-02	1.00e+00	3.863	1	1	61
GO:0071013	catalytic step 2 spliceosome	6.66e-02	1.00e+00	3.863	1	5	61
GO:0006364	rRNA processing	7.30e-02	1.00e+00	3.728	1	2	67
GO:0051082	unfolded protein binding	7.61e-02	1.00e+00	3.665	1	5	70
GO:0001649	osteoblast differentiation	8.03e-02	1.00e+00	3.585	1	5	74
GO:0016032	viral process	8.12e-02	1.00e+00	2.053	2	30	428
GO:0071456	cellular response to hypoxia	8.24e-02	1.00e+00	3.546	1	2	76
GO:0030529	ribonucleoprotein complex	8.86e-02	1.00e+00	3.436	1	5	82
GO:0006457	protein folding	1.04e-01	1.00e+00	3.194	1	5	97
GO:0006413	translational initiation	1.06e-01	1.00e+00	3.165	1	6	99
GO:0046777	protein autophosphorylation	1.13e-01	1.00e+00	3.066	1	3	106
GO:0010467	gene expression	1.19e-01	1.00e+00	1.731	2	49	535
GO:0007049	cell cycle	1.22e-01	1.00e+00	2.948	1	8	115
GO:0005829	cytosol	1.25e-01	1.00e+00	0.991	4	88	1787
GO:0003924	GTPase activity	1.26e-01	1.00e+00	2.899	1	7	119
GO:0000082	G1/S transition of mitotic cell cycle	1.32e-01	1.00e+00	2.828	1	4	125
GO:0000398	mRNA splicing, via spliceosome	1.35e-01	1.00e+00	2.794	1	15	128
GO:0006184	GTP catabolic process	1.37e-01	1.00e+00	2.772	1	7	130
GO:0005622	intracellular	1.52e-01	1.00e+00	2.614	1	2	145
GO:0005874	microtubule	1.69e-01	1.00e+00	2.445	1	10	163
GO:0007067	mitotic nuclear division	1.71e-01	1.00e+00	2.428	1	9	165
GO:0008380	RNA splicing	1.71e-01	1.00e+00	2.428	1	21	165
GO:0016071	mRNA metabolic process	1.76e-01	1.00e+00	2.385	1	10	170
GO:0000166	nucleotide binding	1.81e-01	1.00e+00	2.335	1	13	176
GO:0004842	ubiquitin-protein transferase activity	1.84e-01	1.00e+00	2.310	1	17	179
GO:0016070	RNA metabolic process	1.93e-01	1.00e+00	2.239	1	10	188
GO:0016567	protein ubiquitination	1.93e-01	1.00e+00	2.239	1	14	188
GO:0030154	cell differentiation	2.07e-01	1.00e+00	2.122	1	5	204
GO:0005654	nucleoplasm	2.59e-01	1.00e+00	1.019	2	68	876
GO:0006508	proteolysis	2.60e-01	1.00e+00	1.750	1	11	264
GO:0046982	protein heterodimerization activity	2.61e-01	1.00e+00	1.744	1	11	265
GO:0005524	ATP binding	2.66e-01	1.00e+00	0.993	2	37	892
GO:0000278	mitotic cell cycle	3.02e-01	1.00e+00	1.499	1	28	314
GO:0045892	negative regulation of transcription, DNA-templated	3.05e-01	1.00e+00	1.486	1	17	317
GO:0005737	cytoplasm	3.42e-01	1.00e+00	0.431	4	127	2633
GO:0005783	endoplasmic reticulum	3.55e-01	1.00e+00	1.220	1	12	381
GO:0016020	membrane	4.02e-01	1.00e+00	0.557	2	56	1207
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	4.09e-01	1.00e+00	0.961	1	29	456
GO:0008270	zinc ion binding	5.73e-01	1.00e+00	0.288	1	39	727
GO:0070062	extracellular vesicular exosome	5.74e-01	1.00e+00	0.114	2	51	1641
GO:0003677	DNA binding	6.75e-01	1.00e+00	-0.093	1	52	947
GO:0006351	transcription, DNA-templated	7.23e-01	1.00e+00	-0.277	1	47	1076
GO:0005634	nucleus	7.64e-01	1.00e+00	-0.286	3	158	3246
GO:0005730	nucleolus	7.69e-01	1.00e+00	-0.455	1	74	1217

chia-Fav

reg-snw-908

Statistics

Genes (11)

Interactions (13)

Related GO terms (106)