reg-snw-23568

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.248	1.62e-07	3.47e-02	2.67e-02

chia-screen-data-Fav-reg-snw-23568 subnetwork

Genes (6)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
ENPP7	339221	10	-2.569	2.369	6	-	Yes	Yes
APC	324	5	-2.293	2.308	31	TF	Yes	-
FOXJ3	22887	15	-2.407	2.369	87	TF	Yes	Yes
H1FX	8971	6	-2.421	2.369	40	TF	Yes	Yes
[ ARL2BP ]	23568	1	-1.496	2.248	9	-	-	-
REXO1	57455	12	-2.303	2.369	130	TF	Yes	-

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
FOXJ3	22887	REXO1	57455	pd	<>	reg.ITFP.txt: no annot
APC	324	FOXJ3	22887	pd	<>	reg.ITFP.txt: no annot
FOXJ3	22887	ARL2BP	23568	pd	>	reg.ITFP.txt: no annot
REXO1	57455	ENPP7	339221	pd	>	reg.ITFP.txt: no annot
H1FX	8971	REXO1	57455	pd	<>	reg.ITFP.txt: no annot

Related GO terms (104)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0051171	regulation of nitrogen compound metabolic process	6.14e-04	1.00e+00	10.668	1	1	1
GO:0042483	negative regulation of odontogenesis	6.14e-04	1.00e+00	10.668	1	1	1
GO:0009798	axis specification	1.23e-03	1.00e+00	9.668	1	1	2
GO:0006684	sphingomyelin metabolic process	1.23e-03	1.00e+00	9.668	1	1	2
GO:0044337	canonical Wnt signaling pathway involved in positive regulation of apoptotic process	1.23e-03	1.00e+00	9.668	1	1	2
GO:0004767	sphingomyelin phosphodiesterase activity	1.84e-03	1.00e+00	9.083	1	1	3
GO:0019887	protein kinase regulator activity	1.84e-03	1.00e+00	9.083	1	2	3
GO:0007091	metaphase/anaphase transition of mitotic cell cycle	3.07e-03	1.00e+00	8.347	1	2	5
GO:0060770	negative regulation of epithelial cell proliferation involved in prostate gland development	3.07e-03	1.00e+00	8.347	1	1	5
GO:0044336	canonical Wnt signaling pathway involved in negative regulation of apoptotic process	3.07e-03	1.00e+00	8.347	1	1	5
GO:0031274	positive regulation of pseudopodium assembly	3.07e-03	1.00e+00	8.347	1	1	5
GO:0030858	positive regulation of epithelial cell differentiation	3.68e-03	1.00e+00	8.083	1	1	6
GO:0051457	maintenance of protein location in nucleus	4.29e-03	1.00e+00	7.861	1	1	7
GO:0045670	regulation of osteoclast differentiation	4.29e-03	1.00e+00	7.861	1	1	7
GO:0030877	beta-catenin destruction complex	4.29e-03	1.00e+00	7.861	1	1	7
GO:0051988	regulation of attachment of spindle microtubules to kinetochore	4.29e-03	1.00e+00	7.861	1	1	7
GO:0031116	positive regulation of microtubule polymerization	4.91e-03	1.00e+00	7.668	1	1	8
GO:0045667	regulation of osteoblast differentiation	4.91e-03	1.00e+00	7.668	1	2	8
GO:0031122	cytoplasmic microtubule organization	4.91e-03	1.00e+00	7.668	1	1	8
GO:0045295	gamma-catenin binding	5.52e-03	1.00e+00	7.499	1	1	9
GO:0032886	regulation of microtubule-based process	5.52e-03	1.00e+00	7.499	1	1	9
GO:0044295	axonal growth cone	5.52e-03	1.00e+00	7.499	1	1	9
GO:0043409	negative regulation of MAPK cascade	6.13e-03	1.00e+00	7.347	1	1	10
GO:0007026	negative regulation of microtubule depolymerization	6.74e-03	1.00e+00	7.209	1	2	11
GO:0051010	microtubule plus-end binding	6.74e-03	1.00e+00	7.209	1	2	11
GO:0046716	muscle cell cellular homeostasis	6.74e-03	1.00e+00	7.209	1	1	11
GO:0005813	centrosome	6.95e-03	1.00e+00	3.907	2	10	217
GO:0004527	exonuclease activity	7.35e-03	1.00e+00	7.083	1	4	12
GO:0051276	chromosome organization	7.35e-03	1.00e+00	7.083	1	2	12
GO:0035371	microtubule plus-end	7.96e-03	1.00e+00	6.968	1	2	13
GO:0008156	negative regulation of DNA replication	7.96e-03	1.00e+00	6.968	1	1	13
GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	8.57e-03	1.00e+00	6.861	1	3	14
GO:0000281	mitotic cytokinesis	9.18e-03	1.00e+00	6.762	1	3	15
GO:1903506	regulation of nucleic acid-templated transcription	9.79e-03	1.00e+00	6.668	1	2	16
GO:0009954	proximal/distal pattern formation	1.04e-02	1.00e+00	6.581	1	2	17
GO:0005083	small GTPase regulator activity	1.04e-02	1.00e+00	6.581	1	2	17
GO:0009953	dorsal/ventral pattern formation	1.10e-02	1.00e+00	6.499	1	2	18
GO:0008285	negative regulation of cell proliferation	1.12e-02	1.00e+00	3.555	2	11	277
GO:0042517	positive regulation of tyrosine phosphorylation of Stat3 protein	1.22e-02	1.00e+00	6.347	1	1	20
GO:0045296	cadherin binding	1.22e-02	1.00e+00	6.347	1	2	20
GO:0001942	hair follicle development	1.28e-02	1.00e+00	6.276	1	2	21
GO:0006687	glycosphingolipid metabolic process	1.34e-02	1.00e+00	6.209	1	1	22
GO:0051781	positive regulation of cell division	1.34e-02	1.00e+00	6.209	1	2	22
GO:0005881	cytoplasmic microtubule	1.47e-02	1.00e+00	6.083	1	3	24
GO:0005913	cell-cell adherens junction	1.53e-02	1.00e+00	6.025	1	3	25
GO:0007094	mitotic spindle assembly checkpoint	1.53e-02	1.00e+00	6.025	1	4	25
GO:0005902	microvillus	1.53e-02	1.00e+00	6.025	1	1	25
GO:0048538	thymus development	1.53e-02	1.00e+00	6.025	1	1	25
GO:0033077	T cell differentiation in thymus	1.59e-02	1.00e+00	5.968	1	2	26
GO:0005634	nucleus	1.76e-02	1.00e+00	1.326	5	158	3246
GO:0070830	tight junction assembly	1.77e-02	1.00e+00	5.810	1	1	29
GO:0045785	positive regulation of cell adhesion	1.77e-02	1.00e+00	5.810	1	3	29
GO:0016328	lateral plasma membrane	1.89e-02	1.00e+00	5.714	1	2	31
GO:0090305	nucleic acid phosphodiester bond hydrolysis	1.89e-02	1.00e+00	5.714	1	6	31
GO:0006921	cellular component disassembly involved in execution phase of apoptosis	1.89e-02	1.00e+00	5.714	1	1	31
GO:0035019	somatic stem cell maintenance	1.95e-02	1.00e+00	5.668	1	3	32
GO:0000786	nucleosome	2.07e-02	1.00e+00	5.581	1	2	34
GO:0060041	retina development in camera-type eye	2.07e-02	1.00e+00	5.581	1	1	34
GO:0045732	positive regulation of protein catabolic process	2.07e-02	1.00e+00	5.581	1	1	34
GO:0006665	sphingolipid metabolic process	2.31e-02	1.00e+00	5.421	1	1	38
GO:0050790	regulation of catalytic activity	2.73e-02	1.00e+00	5.177	1	2	45
GO:0008013	beta-catenin binding	2.73e-02	1.00e+00	5.177	1	3	45
GO:0007409	axonogenesis	2.73e-02	1.00e+00	5.177	1	2	45
GO:0005929	cilium	2.85e-02	1.00e+00	5.114	1	2	47
GO:0005758	mitochondrial intermembrane space	2.91e-02	1.00e+00	5.083	1	4	48
GO:0032587	ruffle membrane	3.03e-02	1.00e+00	5.025	1	3	50
GO:0006334	nucleosome assembly	3.09e-02	1.00e+00	4.996	1	4	51
GO:0060070	canonical Wnt signaling pathway	3.09e-02	1.00e+00	4.996	1	1	51
GO:0001822	kidney development	3.15e-02	1.00e+00	4.968	1	3	52
GO:0000776	kinetochore	3.33e-02	1.00e+00	4.887	1	8	55
GO:0090090	negative regulation of canonical Wnt signaling pathway	3.57e-02	1.00e+00	4.786	1	5	59
GO:0009952	anterior/posterior pattern specification	3.63e-02	1.00e+00	4.762	1	3	60
GO:0005923	tight junction	3.87e-02	1.00e+00	4.668	1	2	64
GO:0003676	nucleic acid binding	3.99e-02	1.00e+00	4.624	1	4	66
GO:0030496	midbody	4.40e-02	1.00e+00	4.479	1	6	73
GO:0005819	spindle	4.82e-02	1.00e+00	4.347	1	6	80
GO:0030027	lamellipodium	5.29e-02	1.00e+00	4.209	1	3	88
GO:0006461	protein complex assembly	5.46e-02	1.00e+00	4.161	1	2	91
GO:0007050	cell cycle arrest	5.52e-02	1.00e+00	4.145	1	4	92
GO:0016477	cell migration	5.76e-02	1.00e+00	4.083	1	3	96
GO:0008017	microtubule binding	5.82e-02	1.00e+00	4.069	1	9	97
GO:0030335	positive regulation of cell migration	6.05e-02	1.00e+00	4.010	1	2	101
GO:0006974	cellular response to DNA damage stimulus	7.21e-02	1.00e+00	3.750	1	11	121
GO:0003713	transcription coactivator activity	1.08e-01	1.00e+00	3.145	1	21	184
GO:0043065	positive regulation of apoptotic process	1.18e-01	1.00e+00	3.010	1	7	202
GO:0019901	protein kinase binding	1.34e-01	1.00e+00	2.810	1	8	232
GO:0007155	cell adhesion	1.41e-01	1.00e+00	2.738	1	8	244
GO:0043565	sequence-specific DNA binding	1.58e-01	1.00e+00	2.565	1	8	275
GO:0005730	nucleolus	1.66e-01	1.00e+00	1.419	2	74	1217
GO:0006915	apoptotic process	2.27e-01	1.00e+00	1.985	1	15	411
GO:0005794	Golgi apparatus	2.29e-01	1.00e+00	1.971	1	6	415
GO:0005886	plasma membrane	3.02e-01	1.00e+00	0.868	2	46	1784
GO:0003700	sequence-specific DNA binding transcription factor activity	3.08e-01	1.00e+00	1.484	1	22	582
GO:0007165	signal transduction	3.25e-01	1.00e+00	1.397	1	24	618
GO:0006355	regulation of transcription, DNA-templated	3.66e-01	1.00e+00	1.187	1	31	715
GO:0044822	poly(A) RNA binding	4.01e-01	1.00e+00	1.026	1	45	799
GO:0044281	small molecule metabolic process	4.19e-01	1.00e+00	0.947	1	35	844
GO:0003677	DNA binding	4.58e-01	1.00e+00	0.781	1	52	947
GO:0006351	transcription, DNA-templated	5.04e-01	1.00e+00	0.597	1	47	1076
GO:0016020	membrane	5.47e-01	1.00e+00	0.431	1	56	1207
GO:0016021	integral component of membrane	6.39e-01	1.00e+00	0.093	1	19	1526
GO:0005829	cytosol	7.03e-01	1.00e+00	-0.135	1	88	1787
GO:0005515	protein binding	8.00e-01	1.00e+00	-0.341	2	198	4124
GO:0005737	cytoplasm	8.48e-01	1.00e+00	-0.694	1	127	2633

chia-Fav

reg-snw-23568

Statistics

Genes (6)

Interactions (5)

Related GO terms (104)