reg-snw-54453

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.299	8.77e-08	2.48e-02	1.96e-02

chia-screen-data-Fav-reg-snw-54453 subnetwork

Genes (7)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
[ RIN2 ]	54453	2	-1.746	2.299	44	TF	-	-
FOXJ3	22887	15	-2.407	2.369	87	TF	Yes	Yes
APC	324	5	-2.293	2.308	31	TF	Yes	-
AHCTF1	25909	6	-2.069	2.326	31	TF	Yes	-
CGGBP1	8545	5	-2.601	2.326	5	-	Yes	Yes
ZDHHC20	253832	9	-2.673	2.326	25	-	Yes	-
REXO1	57455	12	-2.303	2.369	130	TF	Yes	-

Interactions (6)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
APC	324	FOXJ3	22887	pd	<>	reg.ITFP.txt: no annot
FOXJ3	22887	RIN2	54453	pd	<>	reg.ITFP.txt: no annot
AHCTF1	25909	RIN2	54453	pd	<>	reg.ITFP.txt: no annot
FOXJ3	22887	REXO1	57455	pd	<>	reg.ITFP.txt: no annot
AHCTF1	25909	ZDHHC20	253832	pd	>	reg.ITFP.txt: no annot
CGGBP1	8545	AHCTF1	25909	pd	<	reg.ITFP.txt: no annot

Related GO terms (111)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0051171	regulation of nitrogen compound metabolic process	7.17e-04	1.00e+00	10.446	1	1	1
GO:0042483	negative regulation of odontogenesis	7.17e-04	1.00e+00	10.446	1	1	1
GO:0009798	axis specification	1.43e-03	1.00e+00	9.446	1	1	2
GO:0044337	canonical Wnt signaling pathway involved in positive regulation of apoptotic process	1.43e-03	1.00e+00	9.446	1	1	2
GO:0019887	protein kinase regulator activity	2.15e-03	1.00e+00	8.861	1	2	3
GO:0007091	metaphase/anaphase transition of mitotic cell cycle	3.58e-03	1.00e+00	8.124	1	2	5
GO:0060770	negative regulation of epithelial cell proliferation involved in prostate gland development	3.58e-03	1.00e+00	8.124	1	1	5
GO:0044336	canonical Wnt signaling pathway involved in negative regulation of apoptotic process	3.58e-03	1.00e+00	8.124	1	1	5
GO:0031274	positive regulation of pseudopodium assembly	3.58e-03	1.00e+00	8.124	1	1	5
GO:0030858	positive regulation of epithelial cell differentiation	4.29e-03	1.00e+00	7.861	1	1	6
GO:0045670	regulation of osteoclast differentiation	5.01e-03	1.00e+00	7.639	1	1	7
GO:0030877	beta-catenin destruction complex	5.01e-03	1.00e+00	7.639	1	1	7
GO:0051988	regulation of attachment of spindle microtubules to kinetochore	5.01e-03	1.00e+00	7.639	1	1	7
GO:0031116	positive regulation of microtubule polymerization	5.72e-03	1.00e+00	7.446	1	1	8
GO:0045667	regulation of osteoblast differentiation	5.72e-03	1.00e+00	7.446	1	2	8
GO:0051292	nuclear pore complex assembly	5.72e-03	1.00e+00	7.446	1	4	8
GO:0031122	cytoplasmic microtubule organization	5.72e-03	1.00e+00	7.446	1	1	8
GO:0045295	gamma-catenin binding	6.44e-03	1.00e+00	7.276	1	1	9
GO:0031080	nuclear pore outer ring	6.44e-03	1.00e+00	7.276	1	2	9
GO:0032886	regulation of microtubule-based process	6.44e-03	1.00e+00	7.276	1	1	9
GO:0044295	axonal growth cone	6.44e-03	1.00e+00	7.276	1	1	9
GO:0043409	negative regulation of MAPK cascade	7.15e-03	1.00e+00	7.124	1	1	10
GO:0007026	negative regulation of microtubule depolymerization	7.86e-03	1.00e+00	6.987	1	2	11
GO:0051010	microtubule plus-end binding	7.86e-03	1.00e+00	6.987	1	2	11
GO:0046716	muscle cell cellular homeostasis	7.86e-03	1.00e+00	6.987	1	1	11
GO:0016409	palmitoyltransferase activity	8.57e-03	1.00e+00	6.861	1	1	12
GO:0004527	exonuclease activity	8.57e-03	1.00e+00	6.861	1	4	12
GO:0051276	chromosome organization	8.57e-03	1.00e+00	6.861	1	2	12
GO:0035371	microtubule plus-end	9.28e-03	1.00e+00	6.746	1	2	13
GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	1.00e-02	1.00e+00	6.639	1	3	14
GO:0018345	protein palmitoylation	1.07e-02	1.00e+00	6.539	1	1	15
GO:0017112	Rab guanyl-nucleotide exchange factor activity	1.07e-02	1.00e+00	6.539	1	1	15
GO:0000281	mitotic cytokinesis	1.07e-02	1.00e+00	6.539	1	3	15
GO:0001227	RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription	1.21e-02	1.00e+00	6.359	1	2	17
GO:0009954	proximal/distal pattern formation	1.21e-02	1.00e+00	6.359	1	2	17
GO:0019706	protein-cysteine S-palmitoyltransferase activity	1.21e-02	1.00e+00	6.359	1	1	17
GO:0005083	small GTPase regulator activity	1.21e-02	1.00e+00	6.359	1	2	17
GO:0009953	dorsal/ventral pattern formation	1.28e-02	1.00e+00	6.276	1	2	18
GO:0045296	cadherin binding	1.43e-02	1.00e+00	6.124	1	2	20
GO:0001942	hair follicle development	1.50e-02	1.00e+00	6.054	1	2	21
GO:0051781	positive regulation of cell division	1.57e-02	1.00e+00	5.987	1	2	22
GO:0005881	cytoplasmic microtubule	1.71e-02	1.00e+00	5.861	1	3	24
GO:0005913	cell-cell adherens junction	1.78e-02	1.00e+00	5.802	1	3	25
GO:0007094	mitotic spindle assembly checkpoint	1.78e-02	1.00e+00	5.802	1	4	25
GO:0048538	thymus development	1.78e-02	1.00e+00	5.802	1	1	25
GO:0033077	T cell differentiation in thymus	1.85e-02	1.00e+00	5.746	1	2	26
GO:0070830	tight junction assembly	2.06e-02	1.00e+00	5.588	1	1	29
GO:0045785	positive regulation of cell adhesion	2.06e-02	1.00e+00	5.588	1	3	29
GO:0016328	lateral plasma membrane	2.20e-02	1.00e+00	5.492	1	2	31
GO:0090305	nucleic acid phosphodiester bond hydrolysis	2.20e-02	1.00e+00	5.492	1	6	31
GO:0006921	cellular component disassembly involved in execution phase of apoptosis	2.20e-02	1.00e+00	5.492	1	1	31
GO:0035019	somatic stem cell maintenance	2.27e-02	1.00e+00	5.446	1	3	32
GO:0000910	cytokinesis	2.34e-02	1.00e+00	5.402	1	2	33
GO:0060041	retina development in camera-type eye	2.41e-02	1.00e+00	5.359	1	1	34
GO:0045732	positive regulation of protein catabolic process	2.41e-02	1.00e+00	5.359	1	1	34
GO:0032851	positive regulation of Rab GTPase activity	2.55e-02	1.00e+00	5.276	1	2	36
GO:0050790	regulation of catalytic activity	3.18e-02	1.00e+00	4.954	1	2	45
GO:0008013	beta-catenin binding	3.18e-02	1.00e+00	4.954	1	3	45
GO:0007409	axonogenesis	3.18e-02	1.00e+00	4.954	1	2	45
GO:0051028	mRNA transport	3.32e-02	1.00e+00	4.891	1	5	47
GO:0032587	ruffle membrane	3.53e-02	1.00e+00	4.802	1	3	50
GO:0060070	canonical Wnt signaling pathway	3.60e-02	1.00e+00	4.774	1	1	51
GO:0005643	nuclear pore	3.60e-02	1.00e+00	4.774	1	12	51
GO:0001822	kidney development	3.67e-02	1.00e+00	4.746	1	3	52
GO:0000776	kinetochore	3.88e-02	1.00e+00	4.665	1	8	55
GO:0000777	condensed chromosome kinetochore	4.02e-02	1.00e+00	4.613	1	6	57
GO:0090090	negative regulation of canonical Wnt signaling pathway	4.15e-02	1.00e+00	4.563	1	5	59
GO:0000785	chromatin	4.15e-02	1.00e+00	4.563	1	6	59
GO:0009952	anterior/posterior pattern specification	4.22e-02	1.00e+00	4.539	1	3	60
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	4.43e-02	1.00e+00	4.469	1	2	63
GO:0005634	nucleus	4.47e-02	1.00e+00	1.104	5	158	3246
GO:0005923	tight junction	4.50e-02	1.00e+00	4.446	1	2	64
GO:0003676	nucleic acid binding	4.64e-02	1.00e+00	4.402	1	4	66
GO:0006897	endocytosis	4.71e-02	1.00e+00	4.380	1	2	67
GO:0005096	GTPase activator activity	4.78e-02	1.00e+00	4.359	1	2	68
GO:0016363	nuclear matrix	5.12e-02	1.00e+00	4.256	1	10	73
GO:0003690	double-stranded DNA binding	5.80e-02	1.00e+00	4.071	1	6	83
GO:0003700	sequence-specific DNA binding transcription factor activity	6.10e-02	1.00e+00	2.261	2	22	582
GO:0030027	lamellipodium	6.14e-02	1.00e+00	3.987	1	3	88
GO:0006461	protein complex assembly	6.35e-02	1.00e+00	3.938	1	2	91
GO:0007050	cell cycle arrest	6.41e-02	1.00e+00	3.922	1	4	92
GO:0016477	cell migration	6.68e-02	1.00e+00	3.861	1	3	96
GO:0008017	microtubule binding	6.75e-02	1.00e+00	3.846	1	9	97
GO:0030335	positive regulation of cell migration	7.02e-02	1.00e+00	3.788	1	2	101
GO:0006974	cellular response to DNA damage stimulus	8.36e-02	1.00e+00	3.527	1	11	121
GO:0006355	regulation of transcription, DNA-templated	8.79e-02	1.00e+00	1.964	2	31	715
GO:0031965	nuclear membrane	8.96e-02	1.00e+00	3.424	1	8	130
GO:0007264	small GTPase mediated signal transduction	1.18e-01	1.00e+00	3.003	1	8	174
GO:0005575	cellular_component	1.27e-01	1.00e+00	2.899	1	4	187
GO:0043065	positive regulation of apoptotic process	1.36e-01	1.00e+00	2.788	1	7	202
GO:0015031	protein transport	1.37e-01	1.00e+00	2.781	1	10	203
GO:0005813	centrosome	1.46e-01	1.00e+00	2.684	1	10	217
GO:0019901	protein kinase binding	1.55e-01	1.00e+00	2.588	1	8	232
GO:0007155	cell adhesion	1.62e-01	1.00e+00	2.515	1	8	244
GO:0006351	transcription, DNA-templated	1.75e-01	1.00e+00	1.375	2	47	1076
GO:0043565	sequence-specific DNA binding	1.81e-01	1.00e+00	2.343	1	8	275
GO:0008285	negative regulation of cell proliferation	1.82e-01	1.00e+00	2.332	1	11	277
GO:0000278	mitotic cell cycle	2.05e-01	1.00e+00	2.151	1	28	314
GO:0005730	nucleolus	2.14e-01	1.00e+00	1.197	2	74	1217
GO:0006915	apoptotic process	2.60e-01	1.00e+00	1.763	1	15	411
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	2.85e-01	1.00e+00	1.613	1	29	456
GO:0005886	plasma membrane	3.75e-01	1.00e+00	0.645	2	46	1784
GO:0005829	cytosol	3.76e-01	1.00e+00	0.643	2	88	1787
GO:0008270	zinc ion binding	4.18e-01	1.00e+00	0.940	1	39	727
GO:0005654	nucleoplasm	4.82e-01	1.00e+00	0.671	1	68	876
GO:0003677	DNA binding	5.10e-01	1.00e+00	0.559	1	52	947
GO:0016020	membrane	6.03e-01	1.00e+00	0.209	1	56	1207
GO:0005737	cytoplasm	6.03e-01	1.00e+00	0.084	2	127	2633
GO:0016021	integral component of membrane	6.96e-01	1.00e+00	-0.129	1	19	1526
GO:0070062	extracellular vesicular exosome	7.24e-01	1.00e+00	-0.234	1	51	1641
GO:0005515	protein binding	9.79e-01	1.00e+00	-1.564	1	198	4124

chia-Fav

reg-snw-54453

Statistics

Genes (7)

Interactions (6)

Related GO terms (111)