reg-snw-4728

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
chia-screen-data-Fav	2.201	2.83e-07	4.65e-02	3.53e-02

chia-screen-data-Fav-reg-snw-4728 subnetwork

Genes (6)

Gene Symbol	Entrez Gene ID	Frequency	chia-screen-data-Fav gene score	Best subnetwork score	Degree	Transcription factor	Chia-Hits Primary	Chia-Hits Secondary
XPNPEP1	7511	8	-1.779	2.386	76	TF	-	-
[ NDUFS8 ]	4728	1	-1.106	2.201	10	-	-	-
GPS1	2873	86	-3.621	2.689	36	TF	Yes	Yes
CLASP1	23332	10	-2.365	2.459	39	TF	Yes	-
PHB	5245	82	-2.743	2.689	36	-	Yes	Yes
LPP	4026	1	-1.592	2.201	59	TF	-	-

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
LPP	4026	CLASP1	23332	pd	<>	reg.ITFP.txt: no annot
LPP	4026	NDUFS8	4728	pd	>	reg.ITFP.txt: no annot
NDUFS8	4728	XPNPEP1	7511	pd	<	reg.ITFP.txt: no annot
GPS1	2873	NDUFS8	4728	pd	>	reg.ITFP.txt: no annot
GPS1	2873	PHB	5245	pd	>	reg.ITFP.txt: no annot

Related GO terms (84)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0031592	centrosomal corona	6.14e-04	1.00e+00	10.668	1	1	1
GO:0031111	negative regulation of microtubule polymerization or depolymerization	1.23e-03	1.00e+00	9.668	1	1	2
GO:0051294	establishment of spindle orientation	1.23e-03	1.00e+00	9.668	1	1	2
GO:0030981	cortical microtubule cytoskeleton	1.23e-03	1.00e+00	9.668	1	1	2
GO:0070006	metalloaminopeptidase activity	1.84e-03	1.00e+00	9.083	1	1	3
GO:0003954	NADH dehydrogenase activity	2.46e-03	1.00e+00	8.668	1	1	4
GO:0043515	kinetochore binding	2.46e-03	1.00e+00	8.668	1	2	4
GO:0010815	bradykinin catabolic process	2.46e-03	1.00e+00	8.668	1	1	4
GO:0010458	exit from mitosis	3.07e-03	1.00e+00	8.347	1	2	5
GO:2000323	negative regulation of glucocorticoid receptor signaling pathway	3.07e-03	1.00e+00	8.347	1	1	5
GO:0005828	kinetochore microtubule	3.07e-03	1.00e+00	8.347	1	1	5
GO:0031023	microtubule organizing center organization	3.07e-03	1.00e+00	8.347	1	1	5
GO:0050847	progesterone receptor signaling pathway	3.68e-03	1.00e+00	8.083	1	2	6
GO:0010944	negative regulation of transcription by competitive promoter binding	4.91e-03	1.00e+00	7.668	1	1	8
GO:0010388	cullin deneddylation	4.91e-03	1.00e+00	7.668	1	4	8
GO:0034453	microtubule anchoring	5.52e-03	1.00e+00	7.499	1	1	9
GO:0071354	cellular response to interleukin-6	5.52e-03	1.00e+00	7.499	1	1	9
GO:0032981	mitochondrial respiratory chain complex I assembly	5.52e-03	1.00e+00	7.499	1	1	9
GO:0005743	mitochondrial inner membrane	5.76e-03	1.00e+00	4.046	2	9	197
GO:0005095	GTPase inhibitor activity	6.13e-03	1.00e+00	7.347	1	1	10
GO:0001578	microtubule bundle formation	6.13e-03	1.00e+00	7.347	1	2	10
GO:0060766	negative regulation of androgen receptor signaling pathway	6.74e-03	1.00e+00	7.209	1	4	11
GO:0007026	negative regulation of microtubule depolymerization	6.74e-03	1.00e+00	7.209	1	2	11
GO:0051010	microtubule plus-end binding	6.74e-03	1.00e+00	7.209	1	2	11
GO:0007020	microtubule nucleation	6.74e-03	1.00e+00	7.209	1	1	11
GO:0016575	histone deacetylation	8.57e-03	1.00e+00	6.861	1	2	14
GO:0004177	aminopeptidase activity	8.57e-03	1.00e+00	6.861	1	3	14
GO:0000188	inactivation of MAPK activity	9.18e-03	1.00e+00	6.762	1	1	15
GO:0007163	establishment or maintenance of cell polarity	1.22e-02	1.00e+00	6.347	1	1	20
GO:0071897	DNA biosynthetic process	1.22e-02	1.00e+00	6.347	1	2	20
GO:0051539	4 iron, 4 sulfur cluster binding	1.28e-02	1.00e+00	6.276	1	4	21
GO:0008180	COP9 signalosome	1.47e-02	1.00e+00	6.083	1	6	24
GO:0008137	NADH dehydrogenase (ubiquinone) activity	1.47e-02	1.00e+00	6.083	1	2	24
GO:0005881	cytoplasmic microtubule	1.47e-02	1.00e+00	6.083	1	3	24
GO:0005876	spindle microtubule	1.47e-02	1.00e+00	6.083	1	4	24
GO:0006120	mitochondrial electron transport, NADH to ubiquinone	1.53e-02	1.00e+00	6.025	1	2	25
GO:0005747	mitochondrial respiratory chain complex I	1.59e-02	1.00e+00	5.968	1	2	26
GO:0030145	manganese ion binding	1.59e-02	1.00e+00	5.968	1	3	26
GO:0007254	JNK cascade	2.07e-02	1.00e+00	5.581	1	1	34
GO:0000226	microtubule cytoskeleton organization	2.19e-02	1.00e+00	5.499	1	1	36
GO:0051301	cell division	2.97e-02	1.00e+00	5.054	1	2	49
GO:0022904	respiratory electron transport chain	3.27e-02	1.00e+00	4.914	1	3	54
GO:0000776	kinetochore	3.33e-02	1.00e+00	4.887	1	8	55
GO:0000777	condensed chromosome kinetochore	3.45e-02	1.00e+00	4.836	1	6	57
GO:0042826	histone deacetylase binding	3.51e-02	1.00e+00	4.810	1	5	58
GO:0006979	response to oxidative stress	3.87e-02	1.00e+00	4.668	1	3	64
GO:0030308	negative regulation of cell growth	4.23e-02	1.00e+00	4.539	1	3	70
GO:0001649	osteoblast differentiation	4.46e-02	1.00e+00	4.459	1	5	74
GO:0044237	cellular metabolic process	4.52e-02	1.00e+00	4.440	1	3	75
GO:0005938	cell cortex	4.64e-02	1.00e+00	4.402	1	6	77
GO:0005737	cytoplasm	4.89e-02	1.00e+00	1.306	4	127	2633
GO:0005739	mitochondrion	5.69e-02	1.00e+00	2.304	2	32	659
GO:0000086	G2/M transition of mitotic cell cycle	5.82e-02	1.00e+00	4.069	1	7	97
GO:0008017	microtubule binding	5.82e-02	1.00e+00	4.069	1	9	97
GO:0070062	extracellular vesicular exosome	6.36e-02	1.00e+00	1.573	3	51	1641
GO:0042981	regulation of apoptotic process	6.69e-02	1.00e+00	3.861	1	4	112
GO:0007049	cell cycle	6.86e-02	1.00e+00	3.823	1	8	115
GO:0044212	transcription regulatory region DNA binding	8.47e-02	1.00e+00	3.509	1	13	143
GO:0019899	enzyme binding	1.22e-01	1.00e+00	2.954	1	7	210
GO:0005813	centrosome	1.26e-01	1.00e+00	2.907	1	10	217
GO:0007411	axon guidance	1.37e-01	1.00e+00	2.780	1	8	237
GO:0007155	cell adhesion	1.41e-01	1.00e+00	2.738	1	8	244
GO:0006508	proteolysis	1.52e-01	1.00e+00	2.624	1	11	264
GO:0008150	biological_process	1.55e-01	1.00e+00	2.592	1	3	270
GO:0008285	negative regulation of cell proliferation	1.59e-01	1.00e+00	2.555	1	11	277
GO:0005925	focal adhesion	1.61e-01	1.00e+00	2.529	1	14	282
GO:0016020	membrane	1.63e-01	1.00e+00	1.431	2	56	1207
GO:0000278	mitotic cell cycle	1.78e-01	1.00e+00	2.374	1	28	314
GO:0045892	negative regulation of transcription, DNA-templated	1.80e-01	1.00e+00	2.360	1	17	317
GO:0045893	positive regulation of transcription, DNA-templated	2.10e-01	1.00e+00	2.110	1	21	377
GO:0005515	protein binding	2.11e-01	1.00e+00	0.659	4	198	4124
GO:0005794	Golgi apparatus	2.29e-01	1.00e+00	1.971	1	6	415
GO:0042803	protein homodimerization activity	2.36e-01	1.00e+00	1.927	1	13	428
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	2.49e-01	1.00e+00	1.836	1	29	456
GO:0005829	cytosol	3.03e-01	1.00e+00	0.865	2	88	1787
GO:0005887	integral component of plasma membrane	3.05e-01	1.00e+00	1.501	1	8	575
GO:0005634	nucleus	3.18e-01	1.00e+00	0.589	3	158	3246
GO:0007165	signal transduction	3.25e-01	1.00e+00	1.397	1	24	618
GO:0006355	regulation of transcription, DNA-templated	3.66e-01	1.00e+00	1.187	1	31	715
GO:0008270	zinc ion binding	3.71e-01	1.00e+00	1.163	1	39	727
GO:0044281	small molecule metabolic process	4.19e-01	1.00e+00	0.947	1	35	844
GO:0005654	nucleoplasm	4.31e-01	1.00e+00	0.894	1	68	876
GO:0046872	metal ion binding	4.53e-01	1.00e+00	0.801	1	24	934
GO:0005886	plasma membrane	7.02e-01	1.00e+00	-0.132	1	46	1784

chia-Fav

reg-snw-4728

Statistics

Genes (6)

Interactions (5)

Related GO terms (84)