GO:0006367

transcription initiation from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0006367transcription initiation from RNA polymerase II promoter22184

Term information on AmiGO 2: GO:0006367

Genes (22)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Chia-Hits Primary Chia-Hits Secondary
YAP1 10413 94-4.2563.53853Yes-
MED12 9968 14-2.4653.20665Yes-
MED14 9282 6-2.4203.13749Yes-
MED24 9862 6-2.4823.03339Yes-
POLR2E 5434 4-2.0373.157115Yes-
TAF7 6879 3-2.1762.89938YesYes
POLR2D 5433 3-1.9983.21636--
HDAC1 3065 2-1.7122.869566--
MED17 9440 2-2.1612.86051Yes-
POLR2L 5441 2-1.9723.15963--
WWTR1 25937 2-1.8863.17140--
MED7 9443 2-1.9133.13737--
MED4 29079 2-1.7852.86044--
TEAD4 7004 1-1.6933.17114--
POLR2H 5437 1-1.9602.78941--
TFDP2 7029 1-2.1502.82613Yes-
TAF2 6873 1-2.3842.89968YesYes
CCNC 892 1-1.7262.968101--
ESR1 2099 12.1172.898608--
E2F5 1875 1-1.3812.82613--
TAF12 6883 1-2.1342.82935Yes-
RBPJ 3516 1-1.6982.82948--

Subnetworks (99)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
int-snw-54857 2.797 13 11 1.54e-01 1.00e+00 2.592 1
int-snw-4653 2.922 11 10 1.32e-01 1.00e+00 2.833 1
int-snw-9086 2.957 14 13 1.65e-01 1.00e+00 2.485 1
int-snw-5434 3.157 12 12 4.13e-04 1.00e+00 4.293 3
int-snw-6850 3.067 9 8 1.09e-01 1.00e+00 3.123 1
int-snw-9650 2.847 13 12 1.54e-01 1.00e+00 2.592 1
int-snw-51429 2.870 17 16 5.36e-05 7.73e-01 4.205 4
int-snw-2033 3.120 8 8 9.76e-02 1.00e+00 3.293 1
int-snw-9706 3.197 7 7 8.60e-02 1.00e+00 3.485 1
int-snw-871 2.818 11 9 1.32e-01 1.00e+00 2.833 1
int-snw-50618 3.079 9 9 1.09e-01 1.00e+00 3.123 1
int-snw-1875 2.826 12 11 4.13e-04 1.00e+00 4.293 3
int-snw-7775 2.988 10 9 1.21e-01 1.00e+00 2.971 1
int-snw-1114 2.789 18 13 6.49e-08 9.37e-04 4.708 6
int-snw-54458 2.901 9 5 1.09e-01 1.00e+00 3.123 1
int-snw-54934 2.863 14 13 2.32e-05 3.35e-01 4.485 4
int-snw-4722 2.797 11 9 1.32e-01 1.00e+00 2.833 1
int-snw-90019 2.833 12 11 1.43e-01 1.00e+00 2.708 1
int-snw-116113 2.873 8 6 9.76e-02 1.00e+00 3.293 1
int-snw-1496 2.804 12 10 1.43e-01 1.00e+00 2.708 1
int-snw-4216 2.976 9 8 1.09e-01 1.00e+00 3.123 1
int-snw-54993 2.834 11 8 1.32e-01 1.00e+00 2.833 1
int-snw-663 2.989 9 8 1.09e-01 1.00e+00 3.123 1
int-snw-892 2.968 17 15 1.22e-03 1.00e+00 3.790 3
int-snw-58 3.062 7 7 8.60e-02 1.00e+00 3.485 1
int-snw-29079 2.860 15 13 3.14e-05 4.52e-01 4.386 4
int-snw-10474 3.082 8 7 9.76e-02 1.00e+00 3.293 1
int-snw-9221 3.033 8 7 9.76e-02 1.00e+00 3.293 1
int-snw-11033 2.870 11 10 1.32e-01 1.00e+00 2.833 1
int-snw-3184 3.117 8 8 9.76e-02 1.00e+00 3.293 1
int-snw-7812 2.847 10 9 1.21e-01 1.00e+00 2.971 1
int-snw-4790 2.860 14 14 1.65e-01 1.00e+00 2.485 1
int-snw-10980 2.797 12 8 1.43e-01 1.00e+00 2.708 1
int-snw-4676 3.119 9 8 1.09e-01 1.00e+00 3.123 1
int-snw-5441 3.159 9 8 5.49e-03 1.00e+00 4.123 2
int-snw-5905 2.933 14 10 1.65e-01 1.00e+00 2.485 1
int-snw-2099 2.898 10 9 6.81e-03 1.00e+00 3.971 2
int-snw-10055 2.863 11 8 8.25e-03 1.00e+00 3.833 2
int-snw-1487 2.813 11 9 1.32e-01 1.00e+00 2.833 1
int-snw-1029 2.959 11 10 1.32e-01 1.00e+00 2.833 1
int-snw-122622 2.870 16 12 1.86e-01 1.00e+00 2.293 1
int-snw-6789 3.110 10 10 1.21e-01 1.00e+00 2.971 1
int-snw-57459 2.856 13 10 1.15e-02 1.00e+00 3.592 2
int-snw-4435 2.867 15 14 1.75e-01 1.00e+00 2.386 1
int-snw-221241 2.928 16 14 1.01e-03 1.00e+00 3.877 3
int-snw-4286 2.805 14 10 1.65e-01 1.00e+00 2.485 1
int-snw-57180 2.958 10 7 1.21e-01 1.00e+00 2.971 1
int-snw-463 3.108 9 7 1.09e-01 1.00e+00 3.123 1
int-snw-4670 2.857 18 17 2.06e-01 1.00e+00 2.123 1
int-snw-154796 2.924 7 5 3.26e-03 1.00e+00 4.485 2
int-snw-3883 2.804 15 12 1.75e-01 1.00e+00 2.386 1
int-snw-54514 2.806 18 16 2.06e-01 1.00e+00 2.123 1
int-snw-2521 3.004 10 9 1.21e-01 1.00e+00 2.971 1
int-snw-5073 2.938 9 8 1.09e-01 1.00e+00 3.123 1
int-snw-4927 2.843 15 13 3.14e-05 4.52e-01 4.386 4
int-snw-1601 2.837 12 10 1.43e-01 1.00e+00 2.708 1
int-snw-1432 2.955 13 12 1.54e-01 1.00e+00 2.592 1
int-snw-11171 2.838 13 12 1.54e-01 1.00e+00 2.592 1
int-snw-22898 2.935 6 5 7.42e-02 1.00e+00 3.708 1
int-snw-9443 3.137 9 8 1.62e-04 1.00e+00 4.708 3
int-snw-124944 2.884 11 9 1.32e-01 1.00e+00 2.833 1
int-snw-2147 2.904 8 5 9.76e-02 1.00e+00 3.293 1
int-snw-6879 2.899 8 8 4.31e-03 1.00e+00 4.293 2
int-snw-3895 2.825 17 15 1.94e-02 1.00e+00 3.205 2
int-snw-2483 2.912 9 7 1.09e-01 1.00e+00 3.123 1
int-snw-121536 2.821 14 10 1.65e-01 1.00e+00 2.485 1
int-snw-8697 2.971 12 11 1.17e-05 1.69e-01 4.708 4
int-snw-9968 3.206 7 7 8.60e-02 1.00e+00 3.485 1
int-snw-6280 2.913 15 14 1.75e-01 1.00e+00 2.386 1
int-snw-8971 3.504 5 5 6.22e-02 1.00e+00 3.971 1
int-snw-3516 2.829 5 4 1.58e-03 1.00e+00 4.971 2
int-snw-7342 2.945 8 6 9.76e-02 1.00e+00 3.293 1
int-snw-10482 3.538 5 5 6.22e-02 1.00e+00 3.971 1
int-snw-55161 2.994 10 8 1.21e-01 1.00e+00 2.971 1
int-snw-785 2.861 10 9 1.21e-01 1.00e+00 2.971 1
int-snw-11168 2.880 15 13 1.52e-02 1.00e+00 3.386 2
int-snw-6421 3.193 8 8 9.76e-02 1.00e+00 3.293 1
int-snw-29107 3.066 8 7 9.76e-02 1.00e+00 3.293 1
int-snw-22926 2.845 13 11 1.15e-02 1.00e+00 3.592 2
int-snw-6905 2.836 11 7 1.32e-01 1.00e+00 2.833 1
int-snw-1996 3.149 7 6 8.60e-02 1.00e+00 3.485 1
int-snw-1471 2.933 9 8 1.09e-01 1.00e+00 3.123 1
int-snw-1628 2.949 12 11 1.43e-01 1.00e+00 2.708 1
int-snw-4678 2.951 9 8 1.09e-01 1.00e+00 3.123 1
int-snw-4825 2.847 13 12 1.15e-02 1.00e+00 3.592 2
int-snw-7004 3.171 5 3 2.00e-05 2.89e-01 5.556 3
int-snw-6334 2.813 16 14 1.86e-01 1.00e+00 2.293 1
int-snw-51450 2.944 11 8 1.32e-01 1.00e+00 2.833 1
int-snw-83440 2.861 14 12 1.65e-01 1.00e+00 2.485 1
int-snw-3476 2.924 13 12 1.54e-01 1.00e+00 2.592 1
int-snw-6102 2.830 20 19 1.06e-04 1.00e+00 3.971 4
int-snw-7727 2.937 11 9 8.25e-03 1.00e+00 3.833 2
int-snw-5433 3.216 10 9 6.81e-03 1.00e+00 3.971 2
int-snw-5033 2.877 11 8 1.32e-01 1.00e+00 2.833 1
int-snw-6299 2.869 15 12 1.52e-02 1.00e+00 3.386 2
int-snw-4076 3.014 10 9 1.21e-01 1.00e+00 2.971 1
int-snw-640 2.915 12 9 1.43e-01 1.00e+00 2.708 1
int-snw-23559 2.840 10 8 1.21e-01 1.00e+00 2.971 1
int-snw-89870 2.862 13 11 1.68e-05 2.42e-01 4.592 4