GO:0000978

RNA polymerase II core promoter proximal region sequence-specific DNA binding

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0000978RNA polymerase II core promoter proximal region sequence-specific DNA binding12165

Term information on AmiGO 2: GO:0000978

Genes (12)

Gene Symbol Entrez Gene ID Frequency chia-screen-data-Fav gene score Best subnetwork score Degree Chia-Hits Primary Chia-Hits Secondary
EP300 2033 22-2.2743.120415YesYes
HDAC1 3065 2-1.7122.869566--
SPI1 6688 2-2.0032.870115YesYes
SOX10 6663 2-1.4903.05033--
CREB3 10488 1-1.5622.821124--
GATAD2B 57459 1-1.2332.85627--
MITF 4286 1-1.4582.80530--
AEBP2 121536 1-1.2182.82112--
ESR1 2099 12.1172.898608--
FOXP4 116113 1-0.7222.8734--
NKX6-1 4825 1-1.3432.84713--
RBPJ 3516 1-1.6982.82948--

Subnetworks (32)

Subnetwork ID chia-screen-data-Fav score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
int-snw-3162 2.821 11 9 1.19e-01 1.00e+00 2.990 1
int-snw-9650 2.847 13 12 1.39e-01 1.00e+00 2.749 1
int-snw-2033 3.120 8 8 8.80e-02 1.00e+00 3.450 1
int-snw-871 2.818 11 9 1.19e-01 1.00e+00 2.990 1
int-snw-1875 2.826 12 11 1.29e-01 1.00e+00 2.865 1
int-snw-7775 2.988 10 9 1.09e-01 1.00e+00 3.128 1
int-snw-116113 2.873 8 6 8.80e-02 1.00e+00 3.450 1
int-snw-58 3.062 7 7 7.74e-02 1.00e+00 3.642 1
int-snw-10474 3.082 8 7 8.80e-02 1.00e+00 3.450 1
int-snw-11033 2.870 11 10 1.19e-01 1.00e+00 2.990 1
int-snw-4790 2.860 14 14 1.49e-01 1.00e+00 2.642 1
int-snw-10980 2.797 12 8 1.29e-01 1.00e+00 2.865 1
int-snw-4676 3.119 9 8 9.84e-02 1.00e+00 3.280 1
int-snw-6663 3.050 6 4 6.67e-02 1.00e+00 3.865 1
int-snw-2099 2.898 10 9 1.09e-01 1.00e+00 3.128 1
int-snw-1487 2.813 11 9 1.19e-01 1.00e+00 2.990 1
int-snw-57459 2.856 13 10 9.34e-03 1.00e+00 3.749 2
int-snw-4435 2.867 15 14 1.59e-01 1.00e+00 2.543 1
int-snw-4286 2.805 14 10 4.88e-04 1.00e+00 4.227 3
int-snw-54514 2.806 18 16 1.87e-01 1.00e+00 2.280 1
int-snw-11171 2.838 13 12 1.39e-01 1.00e+00 2.749 1
int-snw-6688 2.870 9 9 9.84e-02 1.00e+00 3.280 1
int-snw-121536 2.821 14 10 1.49e-01 1.00e+00 2.642 1
int-snw-3516 2.829 5 4 5.59e-02 1.00e+00 4.128 1
int-snw-785 2.861 10 9 1.09e-01 1.00e+00 3.128 1
int-snw-22926 2.845 13 11 1.39e-01 1.00e+00 2.749 1
int-snw-1628 2.949 12 11 1.29e-01 1.00e+00 2.865 1
int-snw-4825 2.847 13 12 9.34e-03 1.00e+00 3.749 2
int-snw-51450 2.944 11 8 1.19e-01 1.00e+00 2.990 1
int-snw-83440 2.861 14 12 1.49e-01 1.00e+00 2.642 1
int-snw-3476 2.924 13 12 1.39e-01 1.00e+00 2.749 1
int-snw-6299 2.869 15 12 1.59e-01 1.00e+00 2.543 1