GO:0006357

regulation of transcription from RNA polymerase II promoter

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0006357regulation of transcription from RNA polymerase II promoter8264

Term information on AmiGO 2: GO:0006357

Genes (8)

Gene Symbol Entrez Gene ID Frequency wolf-screen-ratio-mammosphere-adherent gene score Best subnetwork score Degree wolf adherent-list Hits GI wolf mammosphere no adherent-list Hits GI
RUVBL1 8607 170.7201.013343Yes-
SAP18 10284 81.1151.06957Yes-
NEDD8 4738 20.5720.936119Yes-
YY1 7528 10.3590.943114Yes-
SMARCB1 6598 10.4330.956117--
MNAT1 4331 10.0820.94776--
SMARCD1 6602 1-0.0060.976109--
SMARCA4 6597 10.4160.941253--

Subnetworks (30)

Subnetwork ID wolf-screen-ratio-mammosphere-adherent score Size Highlighted genes Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
int-snw-2146 0.934 7 6 1.21e-01 1.00e+00 2.964 1
int-snw-9086 0.967 9 7 1.53e-01 1.00e+00 2.602 1
int-snw-10454 0.950 12 12 1.99e-01 1.00e+00 2.187 1
int-snw-160 0.924 10 8 1.69e-01 1.00e+00 2.450 1
int-snw-3778 0.930 9 8 1.53e-01 1.00e+00 2.602 1
int-snw-6713 0.973 14 13 2.28e-01 1.00e+00 1.964 1
int-snw-7528 0.943 13 13 2.28e-02 1.00e+00 3.071 2
int-snw-1933 0.936 12 12 1.99e-01 1.00e+00 2.187 1
int-snw-4738 0.936 9 9 1.53e-01 1.00e+00 2.602 1
int-snw-6598 0.956 12 11 1.95e-02 1.00e+00 3.187 2
int-snw-8565 0.961 11 10 1.84e-01 1.00e+00 2.312 1
int-snw-5591 0.932 7 6 1.21e-01 1.00e+00 2.964 1
int-snw-10093 0.958 15 14 2.42e-01 1.00e+00 1.865 1
int-snw-51144 0.945 14 12 2.28e-01 1.00e+00 1.964 1
int-snw-2957 0.941 25 21 3.70e-01 1.00e+00 1.128 1
int-snw-1994 0.926 8 8 1.37e-01 1.00e+00 2.772 1
int-snw-6613 0.983 8 6 1.37e-01 1.00e+00 2.772 1
int-snw-6602 0.976 8 7 1.37e-01 1.00e+00 2.772 1
int-snw-6189 1.069 5 5 8.82e-02 1.00e+00 3.450 1
int-snw-3305 0.942 23 22 3.46e-01 1.00e+00 1.248 1
int-snw-55143 0.934 13 10 2.14e-01 1.00e+00 2.071 1
int-snw-7347 0.922 9 8 1.53e-01 1.00e+00 2.602 1
int-snw-10202 1.020 14 13 2.28e-01 1.00e+00 1.964 1
int-snw-9948 1.003 11 11 1.84e-01 1.00e+00 2.312 1
int-snw-6446 0.930 18 18 2.83e-01 1.00e+00 1.602 1
int-snw-124454 0.936 11 10 1.84e-01 1.00e+00 2.312 1
int-snw-9554 0.961 9 8 1.53e-01 1.00e+00 2.602 1
int-snw-8295 1.013 11 11 1.84e-01 1.00e+00 2.312 1
int-snw-54984 0.954 13 11 2.14e-01 1.00e+00 2.071 1
int-snw-4331 0.947 10 8 1.69e-01 1.00e+00 2.450 1