GO:0000978

RNA polymerase II core promoter proximal region sequence-specific DNA binding

Related GO terms (1)

Accession number Name Occurrences in all snw genes Occurrences in all int/reg genes
GO:0000978RNA polymerase II core promoter proximal region sequence-specific DNA binding4168

Term information on AmiGO 2: GO:0000978

Genes (4)

Gene Symbol Entrez Gene ID Frequency tai-screen-luciferase gene score Best subnetwork score Degree List-Gonzales GI Tai-Hits
ACTB 60 15-1.7164.24323--
MYC 4609 9-1.9204.32577--
HSF1 3297 46-4.1795.027209-Yes
SRF 6722 151.9944.24323--

Subnetworks (46)

Subnetwork ID tai-screen-luciferase score Size Hypergeometric test Corrected p-value Enrichment ratio Occurrences in subnetwork
meta-reg-snw-1974 - 0 3.73e-01 1.00e+00 1.110 1
meta-int-snw-23433 - 0 3.55e-03 1.00e+00 3.280 3
meta-reg-snw-51164 - 0 5.06e-01 1.00e+00 0.515 1
meta-reg-snw-1665 - 0 2.44e-01 1.00e+00 1.847 1
meta-reg-snw-1121 - 0 5.01e-01 1.00e+00 0.536 1
meta-reg-snw-6169 - 0 3.86e-01 1.00e+00 1.048 1
meta-reg-snw-1432 - 0 4.11e-01 1.00e+00 0.930 1
meta-int-snw-7133 - 0 2.49e-02 1.00e+00 2.256 3
meta-reg-snw-10198 - 0 3.46e-01 1.00e+00 1.245 1
meta-int-snw-6210 - 0 5.51e-03 1.00e+00 3.058 3
meta-int-snw-51741 - 0 1.56e-02 1.00e+00 2.063 4
meta-int-snw-6233 - 0 2.90e-03 1.00e+00 3.380 3
meta-int-snw-80198 - 0 2.09e-02 1.00e+00 2.354 3
meta-int-snw-56848 - 0 6.79e-03 1.00e+00 2.412 4
meta-reg-snw-821 - 0 5.26e-01 1.00e+00 0.432 1
meta-reg-snw-4904 - 0 3.98e-01 1.00e+00 0.987 1
meta-reg-snw-57120 - 0 5.36e-01 1.00e+00 0.393 1
meta-reg-snw-1964 - 0 5.36e-01 1.00e+00 0.393 1
meta-int-snw-5714 - 0 3.39e-01 1.00e+00 1.280 1
meta-int-snw-115703 - 0 1.04e-02 1.00e+00 2.728 3
meta-reg-snw-10097 - 0 2.52e-01 1.00e+00 1.795 1
meta-reg-snw-8450 - 0 2.44e-01 1.00e+00 1.847 1
meta-int-snw-51382 - 0 9.69e-02 1.00e+00 1.930 2
meta-int-snw-2821 - 0 1.40e-02 1.00e+00 2.572 3
meta-reg-snw-51495 - 0 2.44e-01 1.00e+00 1.847 1
meta-int-snw-7372 - 0 2.39e-02 1.00e+00 2.280 3
meta-int-snw-5706 - 0 5.29e-03 1.00e+00 2.515 4
meta-reg-snw-1500 - 0 5.45e-01 1.00e+00 0.354 1
meta-reg-snw-60 - 0 4.51e-02 1.00e+00 1.920 3
meta-int-snw-112950 - 0 9.20e-04 1.00e+00 3.939 3
meta-reg-snw-4609 - 0 1.27e-01 1.00e+00 1.695 2
meta-reg-snw-55869 - 0 3.92e-01 1.00e+00 1.017 1
meta-int-snw-5901 - 0 4.52e-02 1.00e+00 2.558 2
meta-reg-snw-353274 - 0 3.92e-01 1.00e+00 1.017 1
meta-reg-snw-27130 - 0 3.39e-01 1.00e+00 1.280 1
meta-int-snw-4831 - 0 8.56e-03 1.00e+00 2.317 4
meta-int-snw-10296 - 0 1.34e-01 1.00e+00 1.648 2
meta-reg-snw-84343 - 0 4.40e-01 1.00e+00 0.795 1
meta-int-snw-1120 - 0 3.98e-01 1.00e+00 0.987 1
meta-int-snw-6150 - 0 5.29e-03 1.00e+00 2.515 4
meta-reg-snw-89910 - 0 3.18e-01 1.00e+00 1.393 1
meta-reg-snw-5770 - 0 4.80e-01 1.00e+00 0.625 1
meta-reg-snw-9967 - 0 3.39e-01 1.00e+00 1.280 1
meta-reg-snw-988 - 0 2.82e-01 1.00e+00 1.602 1
meta-reg-snw-55854 - 0 5.26e-01 1.00e+00 0.432 1
meta-reg-snw-52 - 0 3.98e-01 1.00e+00 0.987 1