GO:0000184
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Related GO terms (1)
| Accession number |
Name |
Occurrences in all snw genes |
Occurrences in all int/reg genes |
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 7 | 84 |
Genes (7)
| Gene Symbol |
Entrez Gene ID |
Frequency |
tai-screen-luciferase gene score |
Best subnetwork score |
Degree |
Transcription factor |
List-Gonzales GI |
Tai-Hits |
| RPS16 |
6217 |
3 | -5.444 | 4.880 | 3 | - | - | - |
| RPS6 |
6194 |
3 | -5.603 | 4.880 | 9 | - | Yes | - |
| RPS27A |
6233 |
3 | -5.631 | 4.880 | 2 | - | Yes | - |
| RPS19 |
6223 |
2 | -4.701 | 4.752 | 31 | - | Yes | - |
| RPL38 |
6169 |
1 | -1.992 | 4.851 | 4 | - | Yes | - |
| RPS14 |
6208 |
1 | -4.803 | 4.236 | 13 | - | Yes | - |
| RPS2 |
6187 |
1 | -3.241 | 4.226 | 13 | - | Yes | - |
Subnetworks (7)
| Subnetwork ID |
tai-screen-luciferase score |
Size |
Highlighted genes |
Hypergeometric test |
Corrected p-value |
Enrichment ratio |
Occurrences in subnetwork |
| reg-snw-55869 |
4.752 |
8 |
5 |
6.68e-02 |
1.00e+00 |
3.861 |
1 |
| reg-snw-55854 |
4.880 |
5 |
3 |
6.07e-06 |
5.92e-02 |
6.124 |
3 |
| reg-snw-1964 |
4.532 |
7 |
6 |
2.10e-05 |
2.05e-01 |
5.639 |
3 |
| reg-snw-27130 |
4.707 |
7 |
4 |
5.87e-02 |
1.00e+00 |
4.054 |
1 |
| reg-snw-6169 |
4.851 |
8 |
5 |
6.68e-02 |
1.00e+00 |
3.861 |
1 |
| reg-snw-1500 |
4.226 |
9 |
7 |
6.21e-07 |
6.07e-03 |
5.691 |
4 |
| reg-snw-84343 |
4.236 |
10 |
5 |
8.28e-02 |
1.00e+00 |
3.539 |
1 |