reg-snw-55854

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
tai-screen-luciferase	4.880	1.80e-26	2.35e-04	4.05e-04

tai-screen-luciferase-reg-snw-55854 subnetwork

Genes (5)

Gene Symbol	Entrez Gene ID	Frequency	tai-screen-luciferase gene score	Best subnetwork score	Degree	Transcription factor	List-Gonzales GI	Tai-Hits
RPS16	6217	3	-5.444	4.880	3	-	-	-
[ ZC3H15 ]	55854	1	3.269	4.880	11	-	-	-
RPS27A	6233	3	-5.631	4.880	2	-	Yes	-
RPS6	6194	3	-5.603	4.880	9	-	Yes	-
EIF3M	10480	3	4.451	4.880	55	TF	Yes	-

Interactions (4)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
RPS27A	6233	EIF3M	10480	pd	<	reg.ITFP.txt: no annot
EIF3M	10480	ZC3H15	55854	pd	>	reg.ITFP.txt: no annot
RPS16	6217	EIF3M	10480	pd	<	reg.ITFP.txt: no annot
RPS6	6194	EIF3M	10480	pd	<	reg.ITFP.txt: no annot

Related GO terms (132)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0015935	small ribosomal subunit	1.42e-08	1.38e-04	8.931	3	4	12
GO:0006413	translational initiation	4.93e-08	4.82e-04	6.302	4	12	99
GO:0022627	cytosolic small ribosomal subunit	2.61e-07	2.54e-03	7.610	3	6	30
GO:0019083	viral transcription	2.30e-06	2.25e-02	6.586	3	7	61
GO:0006415	translational termination	2.54e-06	2.48e-02	6.539	3	7	63
GO:0006414	translational elongation	3.34e-06	3.26e-02	6.408	3	7	69
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	4.66e-06	4.55e-02	6.250	3	7	77
GO:0019058	viral life cycle	4.85e-06	4.73e-02	6.231	3	8	78
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	6.07e-06	5.92e-02	6.124	3	7	84
GO:0042274	ribosomal small subunit biogenesis	1.15e-05	1.12e-01	8.472	2	3	11
GO:0003735	structural constituent of ribosome	1.33e-05	1.30e-01	5.748	3	8	109
GO:0016071	mRNA metabolic process	5.05e-05	4.93e-01	5.107	3	11	170
GO:0006412	translation	5.80e-05	5.66e-01	5.041	3	13	178
GO:0016070	RNA metabolic process	6.83e-05	6.67e-01	4.962	3	11	188
GO:0044822	poly(A) RNA binding	2.08e-04	1.00e+00	3.289	4	25	799
GO:0044267	cellular protein metabolic process	4.40e-04	1.00e+00	4.057	3	13	352
GO:0006364	rRNA processing	4.58e-04	1.00e+00	5.865	2	5	67
GO:0002183	cytoplasmic translational initiation	5.12e-04	1.00e+00	10.931	1	1	1
GO:0022605	oogenesis stage	5.12e-04	1.00e+00	10.931	1	1	1
GO:0016032	viral process	7.83e-04	1.00e+00	3.775	3	13	428
GO:0010467	gene expression	1.51e-03	1.00e+00	3.453	3	17	535
GO:0000082	G1/S transition of mitotic cell cycle	1.59e-03	1.00e+00	4.966	2	6	125
GO:0019082	viral protein processing	2.05e-03	1.00e+00	8.931	1	1	4
GO:0000028	ribosomal small subunit assembly	2.56e-03	1.00e+00	8.610	1	3	5
GO:0002309	T cell proliferation involved in immune response	2.56e-03	1.00e+00	8.610	1	1	5
GO:0019221	cytokine-mediated signaling pathway	2.98e-03	1.00e+00	4.505	2	4	172
GO:0006924	activation-induced cell death of T cells	3.07e-03	1.00e+00	8.347	1	2	6
GO:0075733	intracellular transport of virus	3.58e-03	1.00e+00	8.124	1	2	7
GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m	3.58e-03	1.00e+00	8.124	1	1	7
GO:0019068	virion assembly	3.58e-03	1.00e+00	8.124	1	1	7
GO:0043065	positive regulation of apoptotic process	4.09e-03	1.00e+00	4.273	2	3	202
GO:0031929	TOR signaling	4.60e-03	1.00e+00	7.762	1	1	9
GO:0032479	regulation of type I interferon production	4.60e-03	1.00e+00	7.762	1	1	9
GO:0016282	eukaryotic 43S preinitiation complex	5.62e-03	1.00e+00	7.472	1	1	11
GO:0033290	eukaryotic 48S preinitiation complex	5.62e-03	1.00e+00	7.472	1	1	11
GO:0031369	translation initiation factor binding	6.64e-03	1.00e+00	7.231	1	1	13
GO:0048821	erythrocyte development	6.64e-03	1.00e+00	7.231	1	2	13
GO:0005852	eukaryotic translation initiation factor 3 complex	6.64e-03	1.00e+00	7.231	1	1	13
GO:0001731	formation of translation preinitiation complex	7.15e-03	1.00e+00	7.124	1	1	14
GO:0005978	glycogen biosynthetic process	7.66e-03	1.00e+00	7.025	1	1	15
GO:0007220	Notch receptor processing	8.17e-03	1.00e+00	6.931	1	1	16
GO:0070423	nucleotide-binding oligomerization domain containing signaling pathway	8.68e-03	1.00e+00	6.844	1	1	17
GO:0007369	gastrulation	8.68e-03	1.00e+00	6.844	1	1	17
GO:0005844	polysome	9.69e-03	1.00e+00	6.684	1	1	19
GO:0036464	cytoplasmic ribonucleoprotein granule	9.69e-03	1.00e+00	6.684	1	4	19
GO:0043066	negative regulation of apoptotic process	1.01e-02	1.00e+00	3.601	2	6	322
GO:0032480	negative regulation of type I interferon production	1.02e-02	1.00e+00	6.610	1	1	20
GO:0061418	regulation of transcription from RNA polymerase II promoter in response to hypoxia	1.12e-02	1.00e+00	6.472	1	1	22
GO:0007093	mitotic cell cycle checkpoint	1.27e-02	1.00e+00	6.288	1	2	25
GO:0001890	placenta development	1.32e-02	1.00e+00	6.231	1	1	26
GO:0007249	I-kappaB kinase/NF-kappaB signaling	1.32e-02	1.00e+00	6.231	1	2	26
GO:0033077	T cell differentiation in thymus	1.32e-02	1.00e+00	6.231	1	1	26
GO:0042059	negative regulation of epidermal growth factor receptor signaling pathway	1.43e-02	1.00e+00	6.124	1	2	28
GO:0016197	endosomal transport	1.43e-02	1.00e+00	6.124	1	1	28
GO:0006446	regulation of translational initiation	1.48e-02	1.00e+00	6.073	1	2	29
GO:0016020	membrane	1.55e-02	1.00e+00	2.279	3	25	1207
GO:0035872	nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway	1.58e-02	1.00e+00	5.977	1	1	31
GO:0007254	JNK cascade	1.73e-02	1.00e+00	5.844	1	1	34
GO:0044297	cell body	1.78e-02	1.00e+00	5.802	1	1	35
GO:0030666	endocytic vesicle membrane	1.83e-02	1.00e+00	5.762	1	1	36
GO:0003743	translation initiation factor activity	1.88e-02	1.00e+00	5.722	1	5	37
GO:0051403	stress-activated MAPK cascade	2.13e-02	1.00e+00	5.539	1	2	42
GO:0032481	positive regulation of type I interferon production	2.43e-02	1.00e+00	5.347	1	1	48
GO:0034146	toll-like receptor 5 signaling pathway	2.53e-02	1.00e+00	5.288	1	2	50
GO:0034166	toll-like receptor 10 signaling pathway	2.53e-02	1.00e+00	5.288	1	2	50
GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2.63e-02	1.00e+00	5.231	1	3	52
GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway	2.69e-02	1.00e+00	5.204	1	1	53
GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	2.69e-02	1.00e+00	5.204	1	3	53
GO:0038123	toll-like receptor TLR1:TLR2 signaling pathway	2.79e-02	1.00e+00	5.150	1	2	55
GO:0034162	toll-like receptor 9 signaling pathway	2.79e-02	1.00e+00	5.150	1	2	55
GO:0038124	toll-like receptor TLR6:TLR2 signaling pathway	2.79e-02	1.00e+00	5.150	1	2	55
GO:0034134	toll-like receptor 2 signaling pathway	2.84e-02	1.00e+00	5.124	1	2	56
GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2.84e-02	1.00e+00	5.124	1	3	56
GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	2.89e-02	1.00e+00	5.099	1	3	57
GO:0035666	TRIF-dependent toll-like receptor signaling pathway	2.89e-02	1.00e+00	5.099	1	2	57
GO:0002756	MyD88-independent toll-like receptor signaling pathway	2.94e-02	1.00e+00	5.073	1	2	58
GO:0034138	toll-like receptor 3 signaling pathway	2.99e-02	1.00e+00	5.049	1	2	59
GO:0042593	glucose homeostasis	3.04e-02	1.00e+00	5.025	1	1	60
GO:0051439	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	3.04e-02	1.00e+00	5.025	1	3	60
GO:0002755	MyD88-dependent toll-like receptor signaling pathway	3.09e-02	1.00e+00	5.001	1	2	61
GO:0042590	antigen processing and presentation of exogenous peptide antigen via MHC class I	3.09e-02	1.00e+00	5.001	1	3	61
GO:0000187	activation of MAPK activity	3.19e-02	1.00e+00	4.954	1	2	63
GO:0031145	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	3.28e-02	1.00e+00	4.909	1	3	65
GO:0050852	T cell receptor signaling pathway	3.43e-02	1.00e+00	4.844	1	1	68
GO:0002474	antigen processing and presentation of peptide antigen via MHC class I	3.53e-02	1.00e+00	4.802	1	4	70
GO:0034142	toll-like receptor 4 signaling pathway	3.68e-02	1.00e+00	4.742	1	2	73
GO:0071456	cellular response to hypoxia	3.83e-02	1.00e+00	4.684	1	1	76
GO:0006006	glucose metabolic process	4.03e-02	1.00e+00	4.610	1	2	80
GO:0030529	ribonucleoprotein complex	4.13e-02	1.00e+00	4.574	1	3	82
GO:0097190	apoptotic signaling pathway	4.18e-02	1.00e+00	4.556	1	1	83
GO:0002224	toll-like receptor signaling pathway	4.18e-02	1.00e+00	4.556	1	2	83
GO:0051092	positive regulation of NF-kappaB transcription factor activity	4.48e-02	1.00e+00	4.456	1	1	89
GO:0061024	membrane organization	4.48e-02	1.00e+00	4.456	1	3	89
GO:0005829	cytosol	4.57e-02	1.00e+00	1.713	3	33	1787
GO:0000209	protein polyubiquitination	4.62e-02	1.00e+00	4.408	1	3	92
GO:0007219	Notch signaling pathway	4.77e-02	1.00e+00	4.362	1	2	95
GO:0034220	ion transmembrane transport	4.82e-02	1.00e+00	4.347	1	1	96
GO:0000086	G2/M transition of mitotic cell cycle	4.87e-02	1.00e+00	4.332	1	3	97
GO:0008286	insulin receptor signaling pathway	4.87e-02	1.00e+00	4.332	1	2	97
GO:0010008	endosome membrane	5.12e-02	1.00e+00	4.259	1	1	102
GO:0007179	transforming growth factor beta receptor signaling pathway	5.36e-02	1.00e+00	4.190	1	2	107
GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	5.41e-02	1.00e+00	4.177	1	1	108
GO:0042981	regulation of apoptotic process	5.61e-02	1.00e+00	4.124	1	4	112
GO:0008543	fibroblast growth factor receptor signaling pathway	5.70e-02	1.00e+00	4.099	1	1	114
GO:0038095	Fc-epsilon receptor signaling pathway	6.58e-02	1.00e+00	3.887	1	1	132
GO:0007173	epidermal growth factor receptor signaling pathway	7.06e-02	1.00e+00	3.782	1	3	142
GO:0046872	metal ion binding	7.52e-02	1.00e+00	2.064	2	10	934
GO:0006367	transcription initiation from RNA polymerase II promoter	7.98e-02	1.00e+00	3.601	1	3	161
GO:0007067	mitotic nuclear division	8.17e-02	1.00e+00	3.565	1	5	165
GO:0030425	dendrite	8.22e-02	1.00e+00	3.556	1	3	166
GO:0005975	carbohydrate metabolic process	9.17e-02	1.00e+00	3.392	1	1	186
GO:0048011	neurotrophin TRK receptor signaling pathway	9.78e-02	1.00e+00	3.295	1	2	199
GO:0006281	DNA repair	9.97e-02	1.00e+00	3.266	1	2	203
GO:0005515	protein binding	1.05e-01	1.00e+00	0.922	4	50	4124
GO:0019901	protein kinase binding	1.13e-01	1.00e+00	3.073	1	8	232
GO:0005730	nucleolus	1.20e-01	1.00e+00	1.682	2	21	1217
GO:0003723	RNA binding	1.20e-01	1.00e+00	2.983	1	6	247
GO:0005925	focal adhesion	1.36e-01	1.00e+00	2.792	1	12	282
GO:0000278	mitotic cell cycle	1.51e-01	1.00e+00	2.637	1	9	314
GO:0055085	transmembrane transport	1.58e-01	1.00e+00	2.570	1	1	329
GO:0048471	perinuclear region of cytoplasm	1.64e-01	1.00e+00	2.505	1	7	344
GO:0006915	apoptotic process	1.93e-01	1.00e+00	2.248	1	4	411
GO:0070062	extracellular vesicular exosome	1.99e-01	1.00e+00	1.251	2	28	1641
GO:0045087	innate immune response	2.11e-01	1.00e+00	2.111	1	6	452
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	2.13e-01	1.00e+00	2.099	1	6	456
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	2.89e-01	1.00e+00	1.601	1	8	644
GO:0044281	small molecule metabolic process	3.64e-01	1.00e+00	1.210	1	8	844
GO:0005654	nucleoplasm	3.75e-01	1.00e+00	1.157	1	16	876
GO:0005737	cytoplasm	4.09e-01	1.00e+00	0.569	2	39	2633
GO:0006351	transcription, DNA-templated	4.42e-01	1.00e+00	0.860	1	15	1076
GO:0005634	nucleus	5.37e-01	1.00e+00	0.267	2	40	3246
GO:0005886	plasma membrane	6.35e-01	1.00e+00	0.131	1	13	1784

Tai-Luciferase

reg-snw-55854

Statistics

Genes (5)

Interactions (4)

Related GO terms (132)