Subnetwork | Dataset | Score | p-value 1 | p-value 2 | p-value 3 | Size | Highlighted genes |
---|---|---|---|---|---|---|---|
reg-snw-56655 | wolf-screen-ratio-mammosphere-adherent | 0.828 | 9.29e-07 | 2.91e-03 | 5.53e-03 | 8 | 7 |
int-snw-7431 | wolf-screen-ratio-mammosphere-adherent | 0.927 | 3.16e-15 | 2.90e-03 | 4.49e-02 | 11 | 10 |
Gene Symbol | Entrez Gene ID | Frequency | wolf-screen-ratio-mammosphere-adherent gene score | Best subnetwork score | Degree | wolf adherent-list Hits GI | wolf mammosphere no adherent-list Hits GI |
---|---|---|---|---|---|---|---|
PSMA2 | 5683 | 112 | 1.093 | 1.106 | 108 | Yes | - |
RBX1 | 9978 | 115 | 1.185 | 0.934 | 148 | Yes | - |
PSMB7 | 5695 | 118 | 0.982 | 0.934 | 90 | Yes | - |
PSMD7 | 5713 | 15 | 0.640 | 0.958 | 133 | Yes | - |
PSMA1 | 5682 | 100 | 0.996 | 0.878 | 152 | Yes | - |
VARS | 7407 | 86 | 0.549 | 1.002 | 204 | Yes | - |
VIM | 7431 | 2 | 0.044 | 0.927 | 246 | Yes | - |
POLE4 | 56655 | 63 | 0.177 | 0.828 | 56 | - | - |
RPSA | 3921 | 120 | 1.327 | 1.151 | 152 | Yes | - |
PSMB3 | 5691 | 64 | 0.668 | 0.901 | 19 | Yes | - |
RPA2 | 6118 | 96 | 1.250 | 1.151 | 76 | Yes | - |
PSMB2 | 5690 | 116 | 0.877 | 0.956 | 169 | Yes | - |
ACTB | 60 | 134 | 1.153 | 1.151 | 610 | Yes | - |
PSMD11 | 5717 | 124 | 1.095 | 1.106 | 218 | Yes | - |
CASP8 | 841 | 12 | 0.804 | 1.041 | 141 | - | - |
KPNB1 | 3837 | 17 | 0.613 | 1.017 | 296 | Yes | - |
Gene Symbol 1 | Entrez Gene ID 1 | Gene Symbol 2 | Entrez Gene ID 2 | Type | Direction | Origin databases / Sources |
---|---|---|---|---|---|---|
PSMA1 | 5682 | PSMB2 | 5690 | pp | -- | int.Intact: MI:0915(physical association), MI:0914(association); int.I2D: HPRD, IntAct, IntAct_Mouse, IntAct_Yeast, INTEROLOG, BioGrid_Yeast, Krogan_Core, MINT_Yeast, YeastHigh; int.HPRD: yeast 2-hybrid |
PSMB7 | 5695 | PSMD7 | 5713 | pp | -- | int.I2D: BioGrid_Yeast |
ACTB | 60 | KPNB1 | 3837 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: IntAct |
ACTB | 60 | PSMD7 | 5713 | pp | -- | int.I2D: BioGrid_Yeast |
PSMA2 | 5683 | PSMB7 | 5695 | pp | -- | int.Intact: MI:0914(association); int.I2D: BCI, BioGrid, BioGrid_Yeast, BIND_Yeast, IntAct, Krogan_Core, MINT_Yeast, YeastLow, IntAct_Yeast |
PSMB2 | 5690 | POLE4 | 56655 | pd | < | reg.ITFP.txt: no annot |
PSMA2 | 5683 | PSMD11 | 5717 | pp | -- | int.I2D: BioGrid_Yeast, YeastLow |
RPSA | 3921 | PSMD11 | 5717 | pp | -- | int.I2D: IntAct_Yeast |
ACTB | 60 | PSMB2 | 5690 | pp | -- | int.I2D: BioGrid_Yeast |
PSMA1 | 5682 | PSMB3 | 5691 | pp | -- | int.Intact: MI:0914(association); int.I2D: IntAct, IntAct_Fly, IntAct_Mouse, IntAct_Yeast, YeastHigh, BioGrid_Yeast |
RPSA | 3921 | VARS | 7407 | pp | -- | int.I2D: IntAct_Yeast |
ACTB | 60 | RBX1 | 9978 | pp | -- | int.I2D: BioGrid_Yeast |
PSMB2 | 5690 | PSMD7 | 5713 | pp | -- | int.I2D: BioGrid_Yeast, YeastMedium |
PSMA1 | 5682 | PSMA2 | 5683 | pp | -- | int.Intact: MI:0915(physical association), MI:0914(association); int.I2D: BioGrid_Worm, BioGrid_Yeast, BIND_Worm, CE_DATA, HPRD, IntAct, IntAct_Mouse, IntAct_Yeast, INTEROLOG, MINT_Worm, BioGrid, IntAct_Fly, IntAct_Worm, Krogan_Core, MINT_Yeast, YeastHigh; int.HPRD: yeast 2-hybrid |
ACTB | 60 | RPSA | 3921 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: IntAct_Yeast, IntAct |
PSMA1 | 5682 | PSMB7 | 5695 | pp | -- | int.Intact: MI:0914(association); int.I2D: BioGrid_Yeast, IntAct, IntAct_Mouse, IntAct_Yeast, YeastLow, Krogan_Core, MINT_Yeast |
ACTB | 60 | PSMA1 | 5682 | pp | -- | int.I2D: BioGrid_Yeast |
PSMB7 | 5695 | RBX1 | 9978 | pd | < | reg.ITFP.txt: no annot |
VARS | 7407 | POLE4 | 56655 | pd | <> | reg.ITFP.txt: no annot |
PSMA2 | 5683 | PSMB3 | 5691 | pp | -- | int.Intact: MI:0914(association); int.I2D: BCI, BioGrid, BioGrid_Yeast, BIND_Yeast, IntAct, IntAct_Fly, IntAct_Yeast, INTEROLOG, Krogan_Core, MINT_Yeast, YeastHigh, Yu_GoldStd |
ACTB | 60 | VIM | 7431 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: IntAct |
PSMA1 | 5682 | PSMD7 | 5713 | pp | -- | int.I2D: BioGrid_Yeast, YeastMedium, IntAct_Yeast, MINT_Yeast |
PSMB7 | 5695 | PSMD11 | 5717 | pp | -- | int.I2D: BioGrid_Yeast |
KPNB1 | 3837 | PSMA2 | 5683 | pp | -- | int.I2D: Krogan_NonCore, YeastLow |
PSMA2 | 5683 | POLE4 | 56655 | pd | < | reg.ITFP.txt: no annot |
KPNB1 | 3837 | VIM | 7431 | pp | -- | int.I2D: BIND_Mouse |
ACTB | 60 | PSMD11 | 5717 | pp | -- | int.I2D: BioGrid_Yeast |
PSMB7 | 5695 | POLE4 | 56655 | pd | < | reg.ITFP.txt: no annot |
PSMB2 | 5690 | PSMB7 | 5695 | pp | -- | int.Intact: MI:0914(association); int.I2D: BioGrid_Yeast, Krogan_Core, MINT_Yeast, YeastLow, IntAct |
PSMA1 | 5682 | VIM | 7431 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: HPRD, IntAct, BioGrid, MINT, VidalHuman_core; int.Mint: MI:0915(physical association); int.HPRD: yeast 2-hybrid |
CASP8 | 841 | VIM | 7431 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: IntAct, BCI, BioGrid, HPRD, MINT, StelzlHigh; int.Mint: MI:0915(physical association); int.HPRD: in vivo |
PSMD7 | 5713 | RBX1 | 9978 | pp | -- | int.I2D: YeastLow, BioGrid_Yeast, IntAct_Yeast, MINT_Yeast |
PSMB3 | 5691 | PSMB7 | 5695 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: BCI, BioGrid_Yeast, BIND_Yeast, IntAct, IntAct_Yeast, YeastHigh, HPRD, Krogan_Core, MINT_Yeast, MIPS; int.HPRD: yeast 2-hybrid |
ACTB | 60 | PSMB7 | 5695 | pp | -- | int.I2D: BioGrid_Yeast |
PSMD7 | 5713 | VIM | 7431 | pp | -- | int.I2D: HPRD; int.HPRD: yeast 2-hybrid |
PSMB2 | 5690 | PSMB3 | 5691 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: IntAct, INTEROLOG, MINT, Yu_GoldStd, BCI, BioGrid_Yeast, BIND_Yeast, HPRD, IntAct_Yeast, Krogan_Core, MINT_Yeast, YeastHigh; int.Mint: MI:0915(physical association); int.HPRD: yeast 2-hybrid |
ACTB | 60 | RPA2 | 6118 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: IntAct |
KPNB1 | 3837 | PSMA1 | 5682 | pp | -- | int.I2D: YeastLow |
PSMB3 | 5691 | POLE4 | 56655 | pd | < | reg.ITFP.txt: no annot |
PSMA2 | 5683 | PSMD7 | 5713 | pp | -- | int.I2D: BioGrid_Yeast, YeastLow |
PSMA1 | 5682 | PSMD11 | 5717 | pp | -- | int.I2D: BioGrid_Yeast, YeastLow |
PSMB2 | 5690 | PSMD11 | 5717 | pd | < | reg.ITFP.txt: no annot |
PSMB2 | 5690 | PSMD11 | 5717 | pp | -- | int.I2D: BioGrid_Yeast, YeastLow |
PSMB2 | 5690 | VARS | 7407 | pd | < | reg.ITFP.txt: no annot |
PSMD7 | 5713 | PSMD11 | 5717 | pp | -- | int.Intact: MI:0915(physical association); int.I2D: BioGrid_Yeast, IntAct_Yeast, Krogan_Core, MINT_Yeast, Tarassov_PCA, YeastHigh, BioGrid, IntAct |
PSMB3 | 5691 | PSMD7 | 5713 | pp | -- | int.I2D: YeastLow |
PSMB3 | 5691 | PSMD11 | 5717 | pp | -- | int.I2D: YeastLow |
KPNB1 | 3837 | PSMD11 | 5717 | pp | -- | int.I2D: Krogan_NonCore |
PSMA2 | 5683 | PSMB2 | 5690 | pp | -- | int.Intact: MI:0914(association); int.I2D: BCI, BioGrid, BioGrid_Yeast, IntAct, INTEROLOG, MINT_Yeast, YeastHigh, IntAct_Yeast, Krogan_Core |
Accession number | Name | Hypergeometric test | Corrected p-value | Enrichment ratio | Occurrence in subnetwork | Occurrences in all snw genes | Occurrences in all int/reg genes |
---|---|---|---|---|---|---|---|
GO:0016032 | viral process | 2.46e-15 | 4.02e-11 | 4.503 | 12 | 55 | 540 |
GO:0006521 | regulation of cellular amino acid metabolic process | 1.83e-14 | 2.99e-10 | 7.158 | 7 | 21 | 50 |
GO:0000502 | proteasome complex | 5.49e-14 | 8.96e-10 | 6.944 | 7 | 22 | 58 |
GO:0051436 | negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | 1.27e-13 | 2.07e-09 | 6.779 | 7 | 24 | 65 |
GO:0006977 | DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest | 1.27e-13 | 2.07e-09 | 6.779 | 7 | 22 | 65 |
GO:0051437 | positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | 2.18e-13 | 3.55e-09 | 6.673 | 7 | 24 | 70 |
GO:0002479 | antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent | 2.95e-13 | 4.82e-09 | 6.612 | 7 | 23 | 73 |
GO:0051439 | regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | 3.26e-13 | 5.32e-09 | 6.592 | 7 | 24 | 74 |
GO:0042590 | antigen processing and presentation of exogenous peptide antigen via MHC class I | 4.35e-13 | 7.10e-09 | 6.535 | 7 | 23 | 77 |
GO:0000082 | G1/S transition of mitotic cell cycle | 5.10e-13 | 8.33e-09 | 5.766 | 8 | 33 | 150 |
GO:0031145 | anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | 5.24e-13 | 8.55e-09 | 6.498 | 7 | 25 | 79 |
GO:0002474 | antigen processing and presentation of peptide antigen via MHC class I | 1.84e-12 | 3.00e-08 | 6.247 | 7 | 23 | 94 |
GO:0005839 | proteasome core complex | 3.85e-12 | 6.29e-08 | 8.146 | 5 | 11 | 18 |
GO:0004298 | threonine-type endopeptidase activity | 6.96e-12 | 1.14e-07 | 7.994 | 5 | 11 | 20 |
GO:0000209 | protein polyubiquitination | 8.28e-12 | 1.35e-07 | 5.944 | 7 | 21 | 116 |
GO:0016071 | mRNA metabolic process | 1.26e-11 | 2.05e-07 | 5.194 | 8 | 34 | 223 |
GO:0006915 | apoptotic process | 1.68e-11 | 2.75e-07 | 4.159 | 10 | 34 | 571 |
GO:0016070 | RNA metabolic process | 2.85e-11 | 4.65e-07 | 5.046 | 8 | 34 | 247 |
GO:0042981 | regulation of apoptotic process | 5.38e-11 | 8.79e-07 | 5.563 | 7 | 26 | 151 |
GO:0034641 | cellular nitrogen compound metabolic process | 1.65e-10 | 2.69e-06 | 5.334 | 7 | 25 | 177 |
GO:0005654 | nucleoplasm | 3.77e-10 | 6.16e-06 | 3.357 | 11 | 83 | 1095 |
GO:0005829 | cytosol | 4.69e-10 | 7.65e-06 | 2.479 | 14 | 125 | 2562 |
GO:0000278 | mitotic cell cycle | 1.27e-09 | 2.06e-05 | 4.358 | 8 | 52 | 398 |
GO:0010467 | gene expression | 2.74e-09 | 4.47e-05 | 3.779 | 9 | 58 | 669 |
GO:0043066 | negative regulation of apoptotic process | 8.20e-08 | 1.34e-03 | 4.044 | 7 | 30 | 433 |
GO:0070062 | extracellular vesicular exosome | 2.35e-06 | 3.84e-02 | 2.157 | 11 | 98 | 2516 |
GO:0005515 | protein binding | 4.26e-06 | 6.95e-02 | 1.320 | 15 | 172 | 6127 |
GO:0044281 | small molecule metabolic process | 1.11e-05 | 1.81e-01 | 2.656 | 8 | 57 | 1295 |
GO:0006921 | cellular component disassembly involved in execution phase of apoptosis | 1.22e-05 | 1.99e-01 | 6.025 | 3 | 5 | 47 |
GO:0019773 | proteasome core complex, alpha-subunit complex | 2.51e-05 | 4.10e-01 | 7.994 | 2 | 5 | 8 |
GO:0005838 | proteasome regulatory particle | 5.91e-05 | 9.65e-01 | 7.409 | 2 | 7 | 12 |
GO:0005634 | nucleus | 2.28e-04 | 1.00e+00 | 1.342 | 12 | 131 | 4828 |
GO:0097110 | scaffold protein binding | 4.96e-04 | 1.00e+00 | 5.907 | 2 | 2 | 34 |
GO:0005730 | nucleolus | 6.06e-04 | 1.00e+00 | 2.084 | 7 | 70 | 1684 |
GO:0031625 | ubiquitin protein ligase binding | 6.65e-04 | 1.00e+00 | 4.088 | 3 | 13 | 180 |
GO:0070243 | regulation of thymocyte apoptotic process | 9.80e-04 | 1.00e+00 | 9.994 | 1 | 1 | 1 |
GO:0030690 | Noc1p-Noc2p complex | 9.80e-04 | 1.00e+00 | 9.994 | 1 | 1 | 1 |
GO:0004832 | valine-tRNA ligase activity | 1.96e-03 | 1.00e+00 | 8.994 | 1 | 1 | 2 |
GO:0006407 | rRNA export from nucleus | 1.96e-03 | 1.00e+00 | 8.994 | 1 | 1 | 2 |
GO:0006438 | valyl-tRNA aminoacylation | 1.96e-03 | 1.00e+00 | 8.994 | 1 | 1 | 2 |
GO:0000461 | endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.96e-03 | 1.00e+00 | 8.994 | 1 | 1 | 2 |
GO:0097199 | cysteine-type endopeptidase activity involved in apoptotic signaling pathway | 1.96e-03 | 1.00e+00 | 8.994 | 1 | 1 | 2 |
GO:0005055 | laminin receptor activity | 1.96e-03 | 1.00e+00 | 8.994 | 1 | 1 | 2 |
GO:0036462 | TRAIL-activated apoptotic signaling pathway | 2.94e-03 | 1.00e+00 | 8.409 | 1 | 1 | 3 |
GO:0060715 | syncytiotrophoblast cell differentiation involved in labyrinthine layer development | 2.94e-03 | 1.00e+00 | 8.409 | 1 | 1 | 3 |
GO:0005856 | cytoskeleton | 3.19e-03 | 1.00e+00 | 3.299 | 3 | 8 | 311 |
GO:0006928 | cellular component movement | 3.58e-03 | 1.00e+00 | 4.471 | 2 | 7 | 92 |
GO:0005200 | structural constituent of cytoskeleton | 3.66e-03 | 1.00e+00 | 4.455 | 2 | 7 | 93 |
GO:0000447 | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.92e-03 | 1.00e+00 | 7.994 | 1 | 1 | 4 |
GO:0030686 | 90S preribosome | 3.92e-03 | 1.00e+00 | 7.994 | 1 | 1 | 4 |
GO:0019788 | NEDD8 ligase activity | 3.92e-03 | 1.00e+00 | 7.994 | 1 | 1 | 4 |
GO:0060020 | Bergmann glial cell differentiation | 3.92e-03 | 1.00e+00 | 7.994 | 1 | 1 | 4 |
GO:0035877 | death effector domain binding | 3.92e-03 | 1.00e+00 | 7.994 | 1 | 1 | 4 |
GO:0031467 | Cul7-RING ubiquitin ligase complex | 3.92e-03 | 1.00e+00 | 7.994 | 1 | 1 | 4 |
GO:0006610 | ribosomal protein import into nucleus | 3.92e-03 | 1.00e+00 | 7.994 | 1 | 1 | 4 |
GO:0071782 | endoplasmic reticulum tubular network | 3.92e-03 | 1.00e+00 | 7.994 | 1 | 1 | 4 |
GO:0016020 | membrane | 4.61e-03 | 1.00e+00 | 1.810 | 6 | 80 | 1746 |
GO:0031465 | Cul4B-RING E3 ubiquitin ligase complex | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 2 | 5 |
GO:0097153 | cysteine-type endopeptidase activity involved in apoptotic process | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 1 | 5 |
GO:2000001 | regulation of DNA damage checkpoint | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 1 | 5 |
GO:0008622 | epsilon DNA polymerase complex | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 1 | 5 |
GO:0031461 | cullin-RING ubiquitin ligase complex | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 1 | 5 |
GO:0043248 | proteasome assembly | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 1 | 5 |
GO:0030891 | VCB complex | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 2 | 5 |
GO:0000730 | DNA recombinase assembly | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 3 | 5 |
GO:0032025 | response to cobalt ion | 4.89e-03 | 1.00e+00 | 7.673 | 1 | 1 | 5 |
GO:0019058 | viral life cycle | 5.54e-03 | 1.00e+00 | 4.149 | 2 | 10 | 115 |
GO:0031466 | Cul5-RING ubiquitin ligase complex | 5.87e-03 | 1.00e+00 | 7.409 | 1 | 1 | 6 |
GO:0031265 | CD95 death-inducing signaling complex | 5.87e-03 | 1.00e+00 | 7.409 | 1 | 1 | 6 |
GO:0030957 | Tat protein binding | 5.87e-03 | 1.00e+00 | 7.409 | 1 | 4 | 6 |
GO:0031264 | death-inducing signaling complex | 5.87e-03 | 1.00e+00 | 7.409 | 1 | 1 | 6 |
GO:0060546 | negative regulation of necroptotic process | 6.84e-03 | 1.00e+00 | 7.187 | 1 | 1 | 7 |
GO:0000028 | ribosomal small subunit assembly | 6.84e-03 | 1.00e+00 | 7.187 | 1 | 1 | 7 |
GO:0002161 | aminoacyl-tRNA editing activity | 6.84e-03 | 1.00e+00 | 7.187 | 1 | 2 | 7 |
GO:0031462 | Cul2-RING ubiquitin ligase complex | 6.84e-03 | 1.00e+00 | 7.187 | 1 | 2 | 7 |
GO:0097342 | ripoptosome | 6.84e-03 | 1.00e+00 | 7.187 | 1 | 1 | 7 |
GO:0031464 | Cul4A-RING E3 ubiquitin ligase complex | 7.82e-03 | 1.00e+00 | 6.994 | 1 | 2 | 8 |
GO:0097202 | activation of cysteine-type endopeptidase activity | 7.82e-03 | 1.00e+00 | 6.994 | 1 | 1 | 8 |
GO:0070688 | MLL5-L complex | 7.82e-03 | 1.00e+00 | 6.994 | 1 | 1 | 8 |
GO:0045116 | protein neddylation | 7.82e-03 | 1.00e+00 | 6.994 | 1 | 2 | 8 |
GO:0008139 | nuclear localization sequence binding | 8.79e-03 | 1.00e+00 | 6.825 | 1 | 2 | 9 |
GO:0097284 | hepatocyte apoptotic process | 8.79e-03 | 1.00e+00 | 6.825 | 1 | 2 | 9 |
GO:0006450 | regulation of translational fidelity | 9.76e-03 | 1.00e+00 | 6.673 | 1 | 2 | 10 |
GO:0070307 | lens fiber cell development | 9.76e-03 | 1.00e+00 | 6.673 | 1 | 2 | 10 |
GO:0043005 | neuron projection | 1.06e-02 | 1.00e+00 | 3.664 | 2 | 4 | 161 |
GO:2001239 | regulation of extrinsic apoptotic signaling pathway in absence of ligand | 1.07e-02 | 1.00e+00 | 6.535 | 1 | 1 | 11 |
GO:0045109 | intermediate filament organization | 1.07e-02 | 1.00e+00 | 6.535 | 1 | 1 | 11 |
GO:0010569 | regulation of double-strand break repair via homologous recombination | 1.07e-02 | 1.00e+00 | 6.535 | 1 | 1 | 11 |
GO:0031571 | mitotic G1 DNA damage checkpoint | 1.07e-02 | 1.00e+00 | 6.535 | 1 | 3 | 11 |
GO:0045651 | positive regulation of macrophage differentiation | 1.07e-02 | 1.00e+00 | 6.535 | 1 | 2 | 11 |
GO:0014002 | astrocyte development | 1.07e-02 | 1.00e+00 | 6.535 | 1 | 1 | 11 |
GO:0001841 | neural tube formation | 1.07e-02 | 1.00e+00 | 6.535 | 1 | 1 | 11 |
GO:0005662 | DNA replication factor A complex | 1.27e-02 | 1.00e+00 | 6.294 | 1 | 3 | 13 |
GO:0035267 | NuA4 histone acetyltransferase complex | 1.36e-02 | 1.00e+00 | 6.187 | 1 | 4 | 14 |
GO:0006607 | NLS-bearing protein import into nucleus | 1.36e-02 | 1.00e+00 | 6.187 | 1 | 2 | 14 |
GO:0032403 | protein complex binding | 1.38e-02 | 1.00e+00 | 3.463 | 2 | 7 | 185 |
GO:0030225 | macrophage differentiation | 1.46e-02 | 1.00e+00 | 6.088 | 1 | 1 | 15 |
GO:0005671 | Ada2/Gcn5/Ada3 transcription activator complex | 1.46e-02 | 1.00e+00 | 6.088 | 1 | 1 | 15 |
GO:0005123 | death receptor binding | 1.46e-02 | 1.00e+00 | 6.088 | 1 | 1 | 15 |
GO:0030101 | natural killer cell activation | 1.56e-02 | 1.00e+00 | 5.994 | 1 | 1 | 16 |
GO:0051603 | proteolysis involved in cellular protein catabolic process | 1.56e-02 | 1.00e+00 | 5.994 | 1 | 2 | 16 |
GO:0050998 | nitric-oxide synthase binding | 1.56e-02 | 1.00e+00 | 5.994 | 1 | 1 | 16 |
GO:0005212 | structural constituent of eye lens | 1.56e-02 | 1.00e+00 | 5.994 | 1 | 1 | 16 |
GO:0010243 | response to organonitrogen compound | 1.65e-02 | 1.00e+00 | 5.907 | 1 | 2 | 17 |
GO:0075733 | intracellular transport of virus | 1.65e-02 | 1.00e+00 | 5.907 | 1 | 2 | 17 |
GO:0006309 | apoptotic DNA fragmentation | 1.65e-02 | 1.00e+00 | 5.907 | 1 | 1 | 17 |
GO:0022624 | proteasome accessory complex | 1.65e-02 | 1.00e+00 | 5.907 | 1 | 9 | 17 |
GO:0035861 | site of double-strand break | 1.75e-02 | 1.00e+00 | 5.825 | 1 | 1 | 18 |
GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 1.85e-02 | 1.00e+00 | 5.747 | 1 | 1 | 19 |
GO:0048863 | stem cell differentiation | 1.85e-02 | 1.00e+00 | 5.747 | 1 | 1 | 19 |
GO:0097194 | execution phase of apoptosis | 1.94e-02 | 1.00e+00 | 5.673 | 1 | 1 | 20 |
GO:0006298 | mismatch repair | 1.94e-02 | 1.00e+00 | 5.673 | 1 | 6 | 20 |
GO:0045862 | positive regulation of proteolysis | 2.04e-02 | 1.00e+00 | 5.602 | 1 | 1 | 21 |
GO:0000718 | nucleotide-excision repair, DNA damage removal | 2.04e-02 | 1.00e+00 | 5.602 | 1 | 5 | 21 |
GO:0006297 | nucleotide-excision repair, DNA gap filling | 2.14e-02 | 1.00e+00 | 5.535 | 1 | 5 | 22 |
GO:0032201 | telomere maintenance via semi-conservative replication | 2.14e-02 | 1.00e+00 | 5.535 | 1 | 7 | 22 |
GO:0030863 | cortical cytoskeleton | 2.14e-02 | 1.00e+00 | 5.535 | 1 | 1 | 22 |
GO:0036464 | cytoplasmic ribonucleoprotein granule | 2.14e-02 | 1.00e+00 | 5.535 | 1 | 4 | 22 |
GO:0031463 | Cul3-RING ubiquitin ligase complex | 2.23e-02 | 1.00e+00 | 5.471 | 1 | 2 | 23 |
GO:0043236 | laminin binding | 2.23e-02 | 1.00e+00 | 5.471 | 1 | 1 | 23 |
GO:0006513 | protein monoubiquitination | 2.23e-02 | 1.00e+00 | 5.471 | 1 | 1 | 23 |
GO:0043044 | ATP-dependent chromatin remodeling | 2.23e-02 | 1.00e+00 | 5.471 | 1 | 4 | 23 |
GO:0000060 | protein import into nucleus, translocation | 2.33e-02 | 1.00e+00 | 5.409 | 1 | 4 | 24 |
GO:0070423 | nucleotide-binding oligomerization domain containing signaling pathway | 2.42e-02 | 1.00e+00 | 5.351 | 1 | 2 | 25 |
GO:0008536 | Ran GTPase binding | 2.42e-02 | 1.00e+00 | 5.351 | 1 | 2 | 25 |
GO:0005844 | polysome | 2.42e-02 | 1.00e+00 | 5.351 | 1 | 4 | 25 |
GO:0042113 | B cell activation | 2.42e-02 | 1.00e+00 | 5.351 | 1 | 2 | 25 |
GO:1900740 | positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway | 2.52e-02 | 1.00e+00 | 5.294 | 1 | 3 | 26 |
GO:0000722 | telomere maintenance via recombination | 2.52e-02 | 1.00e+00 | 5.294 | 1 | 7 | 26 |
GO:0061418 | regulation of transcription from RNA polymerase II promoter in response to hypoxia | 2.52e-02 | 1.00e+00 | 5.294 | 1 | 2 | 26 |
GO:2001238 | positive regulation of extrinsic apoptotic signaling pathway | 2.62e-02 | 1.00e+00 | 5.240 | 1 | 1 | 27 |
GO:0006281 | DNA repair | 2.69e-02 | 1.00e+00 | 2.950 | 2 | 22 | 264 |
GO:0034612 | response to tumor necrosis factor | 2.71e-02 | 1.00e+00 | 5.187 | 1 | 2 | 28 |
GO:0043022 | ribosome binding | 2.71e-02 | 1.00e+00 | 5.187 | 1 | 3 | 28 |
GO:0031492 | nucleosomal DNA binding | 2.71e-02 | 1.00e+00 | 5.187 | 1 | 4 | 28 |
GO:0019894 | kinesin binding | 2.71e-02 | 1.00e+00 | 5.187 | 1 | 1 | 28 |
GO:0031252 | cell leading edge | 2.81e-02 | 1.00e+00 | 5.136 | 1 | 3 | 29 |
GO:0019005 | SCF ubiquitin ligase complex | 2.81e-02 | 1.00e+00 | 5.136 | 1 | 1 | 29 |
GO:0009409 | response to cold | 2.81e-02 | 1.00e+00 | 5.136 | 1 | 2 | 29 |
GO:0003887 | DNA-directed DNA polymerase activity | 2.81e-02 | 1.00e+00 | 5.136 | 1 | 3 | 29 |
GO:0071897 | DNA biosynthetic process | 2.81e-02 | 1.00e+00 | 5.136 | 1 | 2 | 29 |
GO:0006606 | protein import into nucleus | 2.90e-02 | 1.00e+00 | 5.088 | 1 | 1 | 30 |
GO:0010977 | negative regulation of neuron projection development | 2.90e-02 | 1.00e+00 | 5.088 | 1 | 2 | 30 |
GO:0005164 | tumor necrosis factor receptor binding | 2.90e-02 | 1.00e+00 | 5.088 | 1 | 3 | 30 |
GO:0043124 | negative regulation of I-kappaB kinase/NF-kappaB signaling | 2.90e-02 | 1.00e+00 | 5.088 | 1 | 1 | 30 |
GO:0046677 | response to antibiotic | 3.00e-02 | 1.00e+00 | 5.040 | 1 | 2 | 31 |
GO:0006271 | DNA strand elongation involved in DNA replication | 3.00e-02 | 1.00e+00 | 5.040 | 1 | 9 | 31 |
GO:0019899 | enzyme binding | 3.16e-02 | 1.00e+00 | 2.825 | 2 | 11 | 288 |
GO:0008625 | extrinsic apoptotic signaling pathway via death domain receptors | 3.28e-02 | 1.00e+00 | 4.907 | 1 | 2 | 34 |
GO:0034332 | adherens junction organization | 3.47e-02 | 1.00e+00 | 4.825 | 1 | 1 | 36 |
GO:0001895 | retina homeostasis | 3.47e-02 | 1.00e+00 | 4.825 | 1 | 1 | 36 |
GO:0008234 | cysteine-type peptidase activity | 3.57e-02 | 1.00e+00 | 4.785 | 1 | 2 | 37 |
GO:0051084 | 'de novo' posttranslational protein folding | 3.57e-02 | 1.00e+00 | 4.785 | 1 | 4 | 37 |
GO:0030049 | muscle filament sliding | 3.66e-02 | 1.00e+00 | 4.747 | 1 | 1 | 38 |
GO:0097191 | extrinsic apoptotic signaling pathway | 3.66e-02 | 1.00e+00 | 4.747 | 1 | 2 | 38 |
GO:0070527 | platelet aggregation | 3.66e-02 | 1.00e+00 | 4.747 | 1 | 2 | 38 |
GO:0006284 | base-excision repair | 3.76e-02 | 1.00e+00 | 4.709 | 1 | 7 | 39 |
GO:0071407 | cellular response to organic cyclic compound | 3.76e-02 | 1.00e+00 | 4.709 | 1 | 2 | 39 |
GO:0022627 | cytosolic small ribosomal subunit | 3.76e-02 | 1.00e+00 | 4.709 | 1 | 3 | 39 |
GO:0000781 | chromosome, telomeric region | 3.85e-02 | 1.00e+00 | 4.673 | 1 | 2 | 40 |
GO:0006418 | tRNA aminoacylation for protein translation | 4.04e-02 | 1.00e+00 | 4.602 | 1 | 5 | 42 |
GO:0035872 | nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway | 4.14e-02 | 1.00e+00 | 4.568 | 1 | 2 | 43 |
GO:0042110 | T cell activation | 4.14e-02 | 1.00e+00 | 4.568 | 1 | 3 | 43 |
GO:0014070 | response to organic cyclic compound | 4.14e-02 | 1.00e+00 | 4.568 | 1 | 3 | 43 |
GO:0043966 | histone H3 acetylation | 4.32e-02 | 1.00e+00 | 4.503 | 1 | 2 | 45 |
GO:0021762 | substantia nigra development | 4.42e-02 | 1.00e+00 | 4.471 | 1 | 1 | 46 |
GO:0044297 | cell body | 4.42e-02 | 1.00e+00 | 4.471 | 1 | 2 | 46 |
GO:0006283 | transcription-coupled nucleotide-excision repair | 4.42e-02 | 1.00e+00 | 4.471 | 1 | 8 | 46 |
GO:0045111 | intermediate filament cytoskeleton | 4.70e-02 | 1.00e+00 | 4.380 | 1 | 1 | 49 |
GO:0001948 | glycoprotein binding | 4.79e-02 | 1.00e+00 | 4.351 | 1 | 3 | 50 |
GO:0003684 | damaged DNA binding | 4.89e-02 | 1.00e+00 | 4.322 | 1 | 11 | 51 |
GO:0004197 | cysteine-type endopeptidase activity | 4.98e-02 | 1.00e+00 | 4.294 | 1 | 2 | 52 |
GO:0005925 | focal adhesion | 4.99e-02 | 1.00e+00 | 2.463 | 2 | 18 | 370 |
GO:0003725 | double-stranded RNA binding | 5.17e-02 | 1.00e+00 | 4.240 | 1 | 6 | 54 |
GO:0000980 | RNA polymerase II distal enhancer sequence-specific DNA binding | 5.17e-02 | 1.00e+00 | 4.240 | 1 | 5 | 54 |
GO:0008233 | peptidase activity | 5.26e-02 | 1.00e+00 | 4.213 | 1 | 3 | 55 |
GO:0097193 | intrinsic apoptotic signaling pathway | 5.26e-02 | 1.00e+00 | 4.213 | 1 | 4 | 55 |
GO:0000932 | cytoplasmic mRNA processing body | 5.35e-02 | 1.00e+00 | 4.187 | 1 | 3 | 56 |
GO:0008565 | protein transporter activity | 5.45e-02 | 1.00e+00 | 4.162 | 1 | 2 | 57 |
GO:0051291 | protein heterooligomerization | 5.45e-02 | 1.00e+00 | 4.162 | 1 | 1 | 57 |
GO:0000724 | double-strand break repair via homologous recombination | 5.45e-02 | 1.00e+00 | 4.162 | 1 | 6 | 57 |
GO:0045216 | cell-cell junction organization | 5.63e-02 | 1.00e+00 | 4.112 | 1 | 2 | 59 |
GO:0000723 | telomere maintenance | 5.63e-02 | 1.00e+00 | 4.112 | 1 | 8 | 59 |
GO:0005643 | nuclear pore | 5.63e-02 | 1.00e+00 | 4.112 | 1 | 4 | 59 |
GO:0046982 | protein heterodimerization activity | 5.71e-02 | 1.00e+00 | 2.354 | 2 | 11 | 399 |
GO:0006302 | double-strand break repair | 5.91e-02 | 1.00e+00 | 4.040 | 1 | 8 | 62 |
GO:0019903 | protein phosphatase binding | 6.00e-02 | 1.00e+00 | 4.017 | 1 | 4 | 63 |
GO:0005882 | intermediate filament | 6.28e-02 | 1.00e+00 | 3.950 | 1 | 1 | 66 |
GO:0071260 | cellular response to mechanical stimulus | 6.28e-02 | 1.00e+00 | 3.950 | 1 | 4 | 66 |
GO:0006289 | nucleotide-excision repair | 6.56e-02 | 1.00e+00 | 3.886 | 1 | 12 | 69 |
GO:0003697 | single-stranded DNA binding | 6.56e-02 | 1.00e+00 | 3.886 | 1 | 9 | 69 |
GO:0034329 | cell junction assembly | 6.74e-02 | 1.00e+00 | 3.845 | 1 | 1 | 71 |
GO:0032355 | response to estradiol | 6.92e-02 | 1.00e+00 | 3.805 | 1 | 5 | 73 |
GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | 7.20e-02 | 1.00e+00 | 3.747 | 1 | 3 | 76 |
GO:0035666 | TRIF-dependent toll-like receptor signaling pathway | 7.20e-02 | 1.00e+00 | 3.747 | 1 | 2 | 76 |
GO:0038096 | Fc-gamma receptor signaling pathway involved in phagocytosis | 7.29e-02 | 1.00e+00 | 3.728 | 1 | 5 | 77 |
GO:0006919 | activation of cysteine-type endopeptidase activity involved in apoptotic process | 7.29e-02 | 1.00e+00 | 3.728 | 1 | 6 | 77 |
GO:0002756 | MyD88-independent toll-like receptor signaling pathway | 7.38e-02 | 1.00e+00 | 3.709 | 1 | 2 | 78 |
GO:0034138 | toll-like receptor 3 signaling pathway | 7.56e-02 | 1.00e+00 | 3.673 | 1 | 2 | 80 |
GO:0019083 | viral transcription | 7.66e-02 | 1.00e+00 | 3.655 | 1 | 8 | 81 |
GO:0005739 | mitochondrion | 7.87e-02 | 1.00e+00 | 1.549 | 3 | 24 | 1046 |
GO:0047485 | protein N-terminus binding | 8.11e-02 | 1.00e+00 | 3.568 | 1 | 4 | 86 |
GO:0006415 | translational termination | 8.20e-02 | 1.00e+00 | 3.551 | 1 | 8 | 87 |
GO:0045471 | response to ethanol | 8.29e-02 | 1.00e+00 | 3.535 | 1 | 1 | 88 |
GO:0044267 | cellular protein metabolic process | 8.33e-02 | 1.00e+00 | 2.043 | 2 | 24 | 495 |
GO:0005777 | peroxisome | 8.47e-02 | 1.00e+00 | 3.503 | 1 | 2 | 90 |
GO:0016605 | PML body | 8.65e-02 | 1.00e+00 | 3.471 | 1 | 5 | 92 |
GO:0006414 | translational elongation | 8.74e-02 | 1.00e+00 | 3.455 | 1 | 11 | 93 |
GO:0034142 | toll-like receptor 4 signaling pathway | 9.01e-02 | 1.00e+00 | 3.409 | 1 | 2 | 96 |
GO:0071456 | cellular response to hypoxia | 9.19e-02 | 1.00e+00 | 3.380 | 1 | 4 | 98 |
GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | 9.73e-02 | 1.00e+00 | 3.294 | 1 | 8 | 104 |
GO:0014069 | postsynaptic density | 9.90e-02 | 1.00e+00 | 3.267 | 1 | 1 | 106 |
GO:0005741 | mitochondrial outer membrane | 1.01e-01 | 1.00e+00 | 3.240 | 1 | 4 | 108 |
GO:0002224 | toll-like receptor signaling pathway | 1.02e-01 | 1.00e+00 | 3.226 | 1 | 2 | 109 |
GO:0005815 | microtubule organizing center | 1.03e-01 | 1.00e+00 | 3.213 | 1 | 4 | 110 |
GO:0015630 | microtubule cytoskeleton | 1.04e-01 | 1.00e+00 | 3.187 | 1 | 5 | 112 |
GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 1.06e-01 | 1.00e+00 | 3.162 | 1 | 10 | 114 |
GO:0030529 | ribonucleoprotein complex | 1.06e-01 | 1.00e+00 | 3.162 | 1 | 8 | 114 |
GO:0097190 | apoptotic signaling pathway | 1.08e-01 | 1.00e+00 | 3.136 | 1 | 4 | 116 |
GO:0005635 | nuclear envelope | 1.08e-01 | 1.00e+00 | 3.136 | 1 | 6 | 116 |
GO:0072562 | blood microparticle | 1.08e-01 | 1.00e+00 | 3.136 | 1 | 4 | 116 |
GO:0032496 | response to lipopolysaccharide | 1.13e-01 | 1.00e+00 | 3.064 | 1 | 4 | 122 |
GO:0006325 | chromatin organization | 1.14e-01 | 1.00e+00 | 3.052 | 1 | 4 | 123 |
GO:0007219 | Notch signaling pathway | 1.16e-01 | 1.00e+00 | 3.029 | 1 | 4 | 125 |
GO:0006260 | DNA replication | 1.16e-01 | 1.00e+00 | 3.029 | 1 | 12 | 125 |
GO:0006511 | ubiquitin-dependent protein catabolic process | 1.18e-01 | 1.00e+00 | 3.006 | 1 | 5 | 127 |
GO:0006413 | translational initiation | 1.21e-01 | 1.00e+00 | 2.961 | 1 | 12 | 131 |
GO:0045087 | innate immune response | 1.21e-01 | 1.00e+00 | 1.728 | 2 | 20 | 616 |
GO:0009615 | response to virus | 1.22e-01 | 1.00e+00 | 2.950 | 1 | 6 | 132 |
GO:0000790 | nuclear chromatin | 1.23e-01 | 1.00e+00 | 2.939 | 1 | 7 | 133 |
GO:0003735 | structural constituent of ribosome | 1.30e-01 | 1.00e+00 | 2.855 | 1 | 8 | 141 |
GO:0007507 | heart development | 1.30e-01 | 1.00e+00 | 2.855 | 1 | 5 | 141 |
GO:0061024 | membrane organization | 1.34e-01 | 1.00e+00 | 2.805 | 1 | 5 | 146 |
GO:0043123 | positive regulation of I-kappaB kinase/NF-kappaB signaling | 1.36e-01 | 1.00e+00 | 2.785 | 1 | 3 | 148 |
GO:0010628 | positive regulation of gene expression | 1.37e-01 | 1.00e+00 | 2.775 | 1 | 4 | 149 |
GO:0006457 | protein folding | 1.37e-01 | 1.00e+00 | 2.775 | 1 | 8 | 149 |
GO:0045121 | membrane raft | 1.47e-01 | 1.00e+00 | 2.664 | 1 | 8 | 161 |
GO:0008022 | protein C-terminus binding | 1.47e-01 | 1.00e+00 | 2.664 | 1 | 4 | 161 |
GO:0000978 | RNA polymerase II core promoter proximal region sequence-specific DNA binding | 1.53e-01 | 1.00e+00 | 2.602 | 1 | 5 | 168 |
GO:0030424 | axon | 1.56e-01 | 1.00e+00 | 2.568 | 1 | 3 | 172 |
GO:0031965 | nuclear membrane | 1.59e-01 | 1.00e+00 | 2.535 | 1 | 4 | 176 |
GO:0019904 | protein domain specific binding | 1.63e-01 | 1.00e+00 | 2.495 | 1 | 6 | 181 |
GO:0015629 | actin cytoskeleton | 1.65e-01 | 1.00e+00 | 2.479 | 1 | 5 | 183 |
GO:0005737 | cytoplasm | 1.73e-01 | 1.00e+00 | 0.622 | 6 | 98 | 3976 |
GO:0001525 | angiogenesis | 1.79e-01 | 1.00e+00 | 2.351 | 1 | 4 | 200 |
GO:0019221 | cytokine-mediated signaling pathway | 2.03e-01 | 1.00e+00 | 2.149 | 1 | 3 | 230 |
GO:0006412 | translation | 2.07e-01 | 1.00e+00 | 2.118 | 1 | 15 | 235 |
GO:0004842 | ubiquitin-protein transferase activity | 2.24e-01 | 1.00e+00 | 1.994 | 1 | 4 | 256 |
GO:0016567 | protein ubiquitination | 2.56e-01 | 1.00e+00 | 1.770 | 1 | 5 | 299 |
GO:0043234 | protein complex | 2.57e-01 | 1.00e+00 | 1.766 | 1 | 17 | 300 |
GO:0019901 | protein kinase binding | 2.72e-01 | 1.00e+00 | 1.673 | 1 | 21 | 320 |
GO:0007411 | axon guidance | 2.77e-01 | 1.00e+00 | 1.641 | 1 | 9 | 327 |
GO:0008270 | zinc ion binding | 2.82e-01 | 1.00e+00 | 0.935 | 2 | 12 | 1067 |
GO:0005813 | centrosome | 2.85e-01 | 1.00e+00 | 1.589 | 1 | 12 | 339 |
GO:0044822 | poly(A) RNA binding | 2.86e-01 | 1.00e+00 | 0.920 | 2 | 50 | 1078 |
GO:0003723 | RNA binding | 2.97e-01 | 1.00e+00 | 1.523 | 1 | 19 | 355 |
GO:0043565 | sequence-specific DNA binding | 3.04e-01 | 1.00e+00 | 1.483 | 1 | 4 | 365 |
GO:0007155 | cell adhesion | 3.17e-01 | 1.00e+00 | 1.409 | 1 | 8 | 384 |
GO:0006508 | proteolysis | 3.35e-01 | 1.00e+00 | 1.315 | 1 | 9 | 410 |
GO:0007596 | blood coagulation | 3.70e-01 | 1.00e+00 | 1.136 | 1 | 14 | 464 |
GO:0042802 | identical protein binding | 3.87e-01 | 1.00e+00 | 1.055 | 1 | 18 | 491 |
GO:0005524 | ATP binding | 3.88e-01 | 1.00e+00 | 0.591 | 2 | 46 | 1354 |
GO:0042803 | protein homodimerization activity | 4.60e-01 | 1.00e+00 | 0.725 | 1 | 11 | 617 |
GO:0005794 | Golgi apparatus | 4.78e-01 | 1.00e+00 | 0.650 | 1 | 14 | 650 |
GO:0005615 | extracellular space | 6.40e-01 | 1.00e+00 | 0.014 | 1 | 17 | 1010 |
GO:0005886 | plasma membrane | 7.94e-01 | 1.00e+00 | -0.474 | 2 | 38 | 2834 |