int-snw-5687

Statistics

Dataset Score p-value 1 p-value 2 p-value 3
wolf-screen-ratio-mammosphere-adherent 0.956 2.41e-16 1.55e-03 2.85e-02
wolf-screen-ratio-mammosphere-adherent-int-snw-5687 subnetwork

Genes (13)

Gene Symbol Entrez Gene ID Frequency wolf-screen-ratio-mammosphere-adherent gene score Best subnetwork score Degree wolf adherent-list Hits GI wolf mammosphere no adherent-list Hits GI
[ PSMA6 ] 5687 20.6910.956137Yes-
PSMD1 5707 120.8361.057113Yes-
PSMD13 5719 160.8481.029104Yes-
RBX1 9978 971.1851.151139Yes-
PSMA2 5683 601.0931.10689Yes-
PSMD3 5709 570.9861.106146Yes-
PSMB7 5695 480.9821.05257Yes-
PSMB2 5690 180.8771.026117Yes-
PSMA1 5682 610.9961.052123Yes-
PSMD11 5717 1211.0951.106183Yes-
ACTB 60 1671.1531.151587Yes-
PSMD6 9861 110.8481.009131Yes-
PSMC1 5700 140.8401.018137Yes-

Interactions (65)

Gene Symbol 1 Entrez Gene ID 1 Gene Symbol 2 Entrez Gene ID 2 Type Direction Origin databases / Sources
PSMD3 5709 PSMD13 5719 pp -- int.Intact: MI:0915(physical association);
int.I2D: IntAct, MINT_Yeast, YeastHigh, BioGrid, BioGrid_Yeast, IntAct_Yeast, Krogan_Core
PSMA1 5682 PSMD3 5709 pp -- int.I2D: BioGrid_Yeast, YeastMedium
PSMD3 5709 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast, IntAct_Yeast, Krogan_Core, MINT_Yeast, YeastHigh, INTEROLOG
PSMC1 5700 PSMD6 9861 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct, MINT_Yeast, BioGrid, IntAct_Yeast, Krogan_Core, YeastHigh
PSMB7 5695 PSMD6 9861 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct
PSMD1 5707 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast, IntAct_Yeast, Krogan_Core, MINT_Yeast
PSMD11 5717 PSMD6 9861 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct, IntAct_Yeast, Krogan_Core, MINT_Yeast, YeastHigh, BioGrid, INTEROLOG
PSMA1 5682 PSMD6 9861 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct, YeastMedium
ACTB 60 PSMD3 5709 pp -- int.I2D: BioGrid_Yeast
PSMA2 5683 PSMD1 5707 pp -- int.I2D: BioGrid_Yeast
PSMD11 5717 PSMD13 5719 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct, IntAct_Yeast, Krogan_Core, MINT_Yeast, Tarassov_PCA, YeastHigh, BioGrid, INTEROLOG
PSMA2 5683 PSMB7 5695 pp -- int.Intact: MI:0914(association);
int.I2D: BCI, BioGrid, BioGrid_Yeast, BIND_Yeast, IntAct, Krogan_Core, MINT_Yeast, YeastLow, IntAct_Yeast
ACTB 60 PSMA6 5687 pp -- int.I2D: BioGrid_Yeast
PSMA6 5687 RBX1 9978 pp -- int.I2D: BioGrid
PSMB7 5695 PSMD1 5707 pp -- int.Intact: MI:0914(association);
int.I2D: BioGrid_Yeast, IntAct
PSMA1 5682 PSMC1 5700 pp -- int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct_Fly, YeastMedium, IntAct
PSMA6 5687 PSMD1 5707 pp -- int.I2D: BioGrid_Yeast, IntAct_Yeast
PSMA1 5682 PSMA6 5687 pp -- int.Intact: MI:0914(association), MI:0915(physical association);
int.I2D: BioGrid_Worm, BioGrid_Yeast, BIND_Worm, CE_DATA, IntAct, IntAct_Mouse, IntAct_Yeast, INTEROLOG, MINT_Worm, YeastHigh, IntAct_Worm, Krogan_Core, MINT_Yeast;
int.Mint: MI:0914(association)
PSMA2 5683 PSMD6 9861 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct, YeastLow, BioGrid
PSMD1 5707 PSMD13 5719 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: IntAct, MINT_Yeast, BioGrid, BioGrid_Yeast, IntAct_Yeast, Krogan_Core
PSMA2 5683 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast, YeastLow
PSMA1 5682 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast, YeastLow
PSMB2 5690 PSMD1 5707 pp -- int.I2D: BioGrid_Yeast
PSMA2 5683 PSMC1 5700 pp -- int.I2D: BioGrid_Yeast, IntAct_Fly, YeastLow
PSMA1 5682 PSMB7 5695 pp -- int.Intact: MI:0914(association);
int.I2D: BioGrid_Yeast, IntAct, IntAct_Mouse, IntAct_Yeast, YeastLow, Krogan_Core, MINT_Yeast
ACTB 60 RBX1 9978 pp -- int.I2D: BioGrid_Yeast
PSMB2 5690 PSMD13 5719 pp -- int.I2D: BioGrid_Yeast, YeastMedium
PSMD3 5709 PSMD6 9861 pp -- int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Worm, BioGrid_Yeast, BIND_Worm, CE_DATA, IntAct, IntAct_Yeast, MINT_Worm, MINT_Yeast, YeastHigh, BioGrid, BIND_Yeast, IntAct_Worm, INTEROLOG, Krogan_Core, MIPS
PSMA6 5687 PSMD6 9861 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct, YeastLow
PSMB7 5695 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast
PSMB2 5690 PSMD3 5709 pp -- int.I2D: BioGrid_Yeast, YeastMedium
PSMB2 5690 PSMC1 5700 pp -- int.I2D: BioGrid_Yeast, YeastMedium
PSMA2 5683 PSMA6 5687 pp -- int.Intact: MI:0914(association), MI:0915(physical association);
int.I2D: BCI, BioGrid, BioGrid_Yeast, BIND_Yeast, IntAct, IntAct_Yeast, INTEROLOG, MINT_Yeast, YeastHigh, HPRD, Krogan_Core, Tarassov_PCA, Yu_GoldStd;
int.HPRD: yeast 2-hybrid
PSMB7 5695 PSMD3 5709 pp -- int.I2D: BioGrid_Yeast
PSMA6 5687 PSMD13 5719 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: IntAct, YeastLow, BioGrid
PSMC1 5700 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast, IntAct_Yeast, Krogan_Core, MINT_Yeast, YeastHigh, INTEROLOG
PSMA2 5683 PSMD13 5719 pp -- int.I2D: YeastLow
ACTB 60 PSMB2 5690 pp -- int.I2D: BioGrid_Yeast
ACTB 60 PSMC1 5700 pp -- int.I2D: BioGrid_Yeast
PSMD13 5719 PSMD6 9861 pp -- int.Intact: MI:0915(physical association);
int.I2D: BioGrid, BioGrid_Yeast, IntAct, IntAct_Yeast, MINT_Yeast, YeastHigh, Krogan_Core
PSMD1 5707 PSMD6 9861 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid, BioGrid_Yeast, IntAct_Yeast, MINT_Yeast, IntAct, Krogan_Core
PSMC1 5700 PSMD13 5719 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct, MINT_Yeast, YeastHigh, BioGrid, IntAct_Yeast, Krogan_Core
ACTB 60 PSMB7 5695 pp -- int.I2D: BioGrid_Yeast
PSMA1 5682 PSMA2 5683 pp -- int.Intact: MI:0915(physical association), MI:0914(association);
int.I2D: BioGrid_Worm, BioGrid_Yeast, BIND_Worm, CE_DATA, HPRD, IntAct, IntAct_Mouse, IntAct_Yeast, INTEROLOG, MINT_Worm, BioGrid, IntAct_Fly, IntAct_Worm, Krogan_Core, MINT_Yeast, YeastHigh;
int.HPRD: yeast 2-hybrid
PSMB2 5690 PSMB7 5695 pp -- int.Intact: MI:0914(association);
int.I2D: BioGrid_Yeast, Krogan_Core, MINT_Yeast, YeastLow, IntAct
PSMA6 5687 PSMC1 5700 pp -- int.I2D: BioGrid_Yeast, YeastLow
PSMC1 5700 PSMD1 5707 pp -- int.Intact: MI:0915(physical association);
int.I2D: BioGrid_Yeast, IntAct, Krogan_Core, MINT_Yeast
PSMB7 5695 PSMC1 5700 pp -- int.I2D: BioGrid_Yeast
PSMB2 5690 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast, YeastLow
PSMA6 5687 PSMB7 5695 pp -- int.I2D: BioGrid_Yeast, BIND_Yeast, Krogan_Core, MINT_Yeast, YeastLow
ACTB 60 PSMA1 5682 pp -- int.I2D: BioGrid_Yeast
PSMD1 5707 PSMD3 5709 pp -- int.I2D: BioGrid_Yeast, MINT_Yeast, Krogan_Core
PSMA2 5683 PSMB2 5690 pp -- int.Intact: MI:0914(association);
int.I2D: BCI, BioGrid, BioGrid_Yeast, IntAct, INTEROLOG, MINT_Yeast, YeastHigh, IntAct_Yeast, Krogan_Core
PSMB2 5690 PSMD6 9861 pp -- int.I2D: BioGrid_Yeast, YeastMedium
PSMA6 5687 PSMB2 5690 pp -- int.I2D: BioGrid_Yeast, IntAct_Yeast, Krogan_Core, MINT_Yeast, YeastHigh, INTEROLOG, Yu_GoldStd
PSMA1 5682 PSMD13 5719 pp -- int.Proteinpedia: Mass spectrometry;
int.Intact: MI:0915(physical association);
int.I2D: IntAct, YeastMedium, BioGrid, BioGrid_Yeast, IntAct_Yeast
PSMA1 5682 PSMB2 5690 pp -- int.Intact: MI:0915(physical association), MI:0914(association);
int.I2D: HPRD, IntAct, IntAct_Mouse, IntAct_Yeast, INTEROLOG, BioGrid_Yeast, Krogan_Core, MINT_Yeast, YeastHigh;
int.HPRD: yeast 2-hybrid
PSMA1 5682 PSMD1 5707 pp -- int.I2D: BioGrid_Yeast
PSMA2 5683 PSMD3 5709 pp -- int.I2D: BioGrid_Yeast, YeastLow
ACTB 60 PSMD6 9861 pp -- int.I2D: BioGrid_Yeast
ACTB 60 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast
PSMA6 5687 PSMD11 5717 pp -- int.I2D: BioGrid_Yeast, YeastLow
PSMC1 5700 PSMD3 5709 pp -- int.I2D: BioGrid_Yeast, MINT_Yeast, YeastHigh, Krogan_Core
PSMA6 5687 PSMD3 5709 pp -- int.I2D: BioGrid_Yeast, YeastLow
ACTB 60 PSMD13 5719 pp -- int.I2D: BioGrid_Yeast

Related GO terms (125)

Accession number Name Hypergeometric test Corrected p-value Enrichment ratio Occurrence in subnetwork Occurrences in all snw genes Occurrences in all int/reg genes
GO:0006521regulation of cellular amino acid metabolic process2.07e-262.98e-227.931111750
GO:0000502proteasome complex1.26e-251.82e-217.717111758
GO:0006977DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest4.11e-255.93e-217.575111964
GO:0051436negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle4.94e-257.13e-217.553112265
GO:0051437positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle1.19e-241.72e-207.446112270
GO:0002479antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent1.67e-242.41e-207.405112072
GO:0051439regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle2.31e-243.33e-207.366112274
GO:0042590antigen processing and presentation of exogenous peptide antigen via MHC class I2.70e-243.90e-207.346112075
GO:0031145anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process4.98e-247.19e-207.271112379
GO:0002474antigen processing and presentation of peptide antigen via MHC class I2.96e-234.27e-197.052112192
GO:0000209protein polyubiquitination4.31e-226.22e-186.7171120116
GO:0000082G1/S transition of mitotic cell cycle7.54e-211.09e-166.3561132149
GO:0042981regulation of apoptotic process8.13e-211.17e-166.3461124150
GO:0034641cellular nitrogen compound metabolic process3.59e-205.18e-166.1571120171
GO:0016071mRNA metabolic process7.16e-191.03e-145.7741131223
GO:0016070RNA metabolic process2.25e-183.25e-145.6271132247
GO:0016032viral process7.39e-171.07e-124.6401255534
GO:0000278mitotic cell cycle3.76e-165.42e-124.9641148391
GO:0043066negative regulation of apoptotic process9.23e-161.33e-114.8471131424
GO:0022624proteasome accessory complex1.69e-152.44e-118.6136817
GO:0005654nucleoplasm2.23e-153.22e-113.73713761082
GO:0006915apoptotic process1.81e-142.61e-104.4591133555
GO:0010467gene expression1.42e-132.04e-094.1891159669
GO:0005838proteasome regulatory particle1.95e-132.82e-098.8535712
GO:0005839proteasome core complex2.11e-123.04e-088.2685818
GO:0004298threonine-type endopeptidase activity2.86e-124.13e-088.1905819
GO:0044281small molecule metabolic process9.33e-111.35e-063.33311581211
GO:0005829cytosol1.22e-101.75e-062.531131322496
GO:0019773proteasome core complex, alpha-subunit complex3.20e-084.61e-048.701348
GO:0070062extracellular vesicular exosome1.49e-072.15e-032.346111042400
GO:0030234enzyme regulator activity5.82e-058.39e-017.4152313
GO:0042176regulation of protein catabolic process8.94e-051.00e+007.1162316
GO:0005844polysome1.88e-041.00e+006.5922423
GO:0016020membrane2.61e-041.00e+002.2087901681
GO:0035639purine ribonucleoside triphosphate binding9.01e-041.00e+0010.116111
GO:0000932cytoplasmic mRNA processing body1.05e-031.00e+005.3612354
GO:0007127meiosis I1.80e-031.00e+009.116112
GO:0019788NEDD8 ligase activity3.60e-031.00e+008.116114
GO:0031467Cul7-RING ubiquitin ligase complex3.60e-031.00e+008.116114
GO:0031465Cul4B-RING E3 ubiquitin ligase complex4.50e-031.00e+007.794135
GO:0031461cullin-RING ubiquitin ligase complex4.50e-031.00e+007.794115
GO:0043248proteasome assembly4.50e-031.00e+007.794115
GO:0030891VCB complex4.50e-031.00e+007.794125
GO:0030957Tat protein binding5.40e-031.00e+007.531136
GO:0031466Cul5-RING ubiquitin ligase complex5.40e-031.00e+007.531116
GO:0005634nucleus5.94e-031.00e+001.13191364559
GO:0031462Cul2-RING ubiquitin ligase complex6.29e-031.00e+007.308127
GO:0016887ATPase activity6.80e-031.00e+003.98627140
GO:0031464Cul4A-RING E3 ubiquitin ligase complex7.19e-031.00e+007.116128
GO:0070688MLL5-L complex7.19e-031.00e+007.116118
GO:0045116protein neddylation7.19e-031.00e+007.116128
GO:0005730nucleolus1.11e-021.00e+001.7575691641
GO:0035267NuA4 histone acetyltransferase complex1.26e-021.00e+006.3081414
GO:0050998nitric-oxide synthase binding1.43e-021.00e+006.1161116
GO:0051603proteolysis involved in cellular protein catabolic process1.43e-021.00e+006.1161216
GO:0010243response to organonitrogen compound1.52e-021.00e+006.0281317
GO:0017025TBP-class protein binding1.52e-021.00e+006.0281317
GO:0031146SCF-dependent proteasomal ubiquitin-dependent protein catabolic process1.70e-021.00e+005.8681119
GO:0048863stem cell differentiation1.70e-021.00e+005.8681119
GO:0030863cortical cytoskeleton1.97e-021.00e+005.6561122
GO:0036464cytoplasmic ribonucleoprotein granule1.97e-021.00e+005.6561422
GO:0043044ATP-dependent chromatin remodeling2.05e-021.00e+005.5921423
GO:0006513protein monoubiquitination2.05e-021.00e+005.5921123
GO:0031463Cul3-RING ubiquitin ligase complex2.05e-021.00e+005.5921323
GO:0030016myofibril2.23e-021.00e+005.4721125
GO:0051059NF-kappaB binding2.23e-021.00e+005.4721225
GO:0061418regulation of transcription from RNA polymerase II promoter in response to hypoxia2.32e-021.00e+005.4151326
GO:0031492nucleosomal DNA binding2.41e-021.00e+005.3611427
GO:0019894kinesin binding2.50e-021.00e+005.3081128
GO:0019005SCF ubiquitin ligase complex2.58e-021.00e+005.2581129
GO:0006200ATP catabolic process2.75e-021.00e+002.926215292
GO:0004175endopeptidase activity2.85e-021.00e+005.1161232
GO:0001895retina homeostasis3.02e-021.00e+005.0281134
GO:0030017sarcomere3.02e-021.00e+005.0281134
GO:0034332adherens junction organization3.20e-021.00e+004.9461136
GO:0051084'de novo' posttranslational protein folding3.29e-021.00e+004.9061437
GO:0070527platelet aggregation3.37e-021.00e+004.8681238
GO:0003723RNA binding3.68e-021.00e+002.698220342
GO:0014070response to organic cyclic compound3.81e-021.00e+004.6891443
GO:0021762substantia nigra development3.90e-021.00e+004.6561244
GO:0050727regulation of inflammatory response3.98e-021.00e+004.6241345
GO:0005515protein binding4.29e-021.00e+000.72991846024
GO:0000980RNA polymerase II distal enhancer sequence-specific DNA binding4.68e-021.00e+004.3881553
GO:0045216cell-cell junction organization4.76e-021.00e+004.3611254
GO:0034329cell junction assembly5.96e-021.00e+004.0281168
GO:0038096Fc-gamma receptor signaling pathway involved in phagocytosis6.47e-021.00e+003.9061674
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process6.56e-021.00e+003.8871275
GO:0005200structural constituent of cytoskeleton7.90e-021.00e+003.6081891
GO:0016363nuclear matrix7.90e-021.00e+003.60811291
GO:0006928cellular component movement7.90e-021.00e+003.6081791
GO:0071456cellular response to hypoxia7.99e-021.00e+003.5921692
GO:0014069postsynaptic density9.07e-021.00e+003.40113105
GO:0015630microtubule cytoskeleton9.48e-021.00e+003.33414110
GO:0072562blood microparticle9.56e-021.00e+003.32113111
GO:0030529ribonucleoprotein complex9.64e-021.00e+003.30818112
GO:0006325chromatin organization1.01e-011.00e+003.23315118
GO:0007219Notch signaling pathway1.03e-011.00e+003.20915120
GO:0051092positive regulation of NF-kappaB transcription factor activity1.06e-011.00e+003.16114124
GO:0006511ubiquitin-dependent protein catabolic process1.08e-011.00e+003.13815126
GO:0009615response to virus1.08e-011.00e+003.13815126
GO:0000790nuclear chromatin1.10e-011.00e+003.10419129
GO:0006457protein folding1.22e-011.00e+002.95617143
GO:0061024membrane organization1.23e-011.00e+002.93617145
GO:0000978RNA polymerase II core promoter proximal region sequence-specific DNA binding1.39e-011.00e+002.74917165
GO:0030424axon1.40e-011.00e+002.74114166
GO:0031625ubiquitin protein ligase binding1.49e-011.00e+002.640114178
GO:0032403protein complex binding1.53e-011.00e+002.600110183
GO:0004842ubiquitin-protein transferase activity2.07e-011.00e+002.12116255
GO:0006281DNA repair2.11e-011.00e+002.088118261
GO:0005856cytoskeleton2.33e-011.00e+001.931112291
GO:0043234protein complex2.36e-011.00e+001.911118295
GO:0016567protein ubiquitination2.36e-011.00e+001.91115295
GO:0019901protein kinase binding2.51e-011.00e+001.807121317
GO:0007411axon guidance2.52e-011.00e+001.798113319
GO:0005813centrosome2.57e-011.00e+001.767114326
GO:0005925focal adhesion2.84e-011.00e+001.600119366
GO:0006508proteolysis2.92e-011.00e+001.55319378
GO:0005524ATP binding3.29e-011.00e+000.7742601298
GO:0007596blood coagulation3.41e-011.00e+001.286118455
GO:0044267cellular protein metabolic process3.52e-011.00e+001.227129474
GO:0045087innate immune response4.22e-011.00e+000.896124596
GO:0005737cytoplasm4.53e-011.00e+000.23641103767
GO:0005615extracellular space5.91e-011.00e+000.213117957
GO:0008270zinc ion binding6.06e-011.00e+000.154112997
GO:0044822poly(A) RNA binding6.28e-011.00e+000.0711491056