| GO:0045892 | negative regulation of transcription, DNA-templated | 14 | 424 | 
| GO:0035019 | somatic stem cell maintenance | 2 | 40 | 
| GO:0003682 | chromatin binding | 12 | 334 | 
| GO:0030274 | LIM domain binding | 1 | 7 | 
| GO:0021702 | cerebellar Purkinje cell differentiation | 1 | 12 | 
| GO:0022607 | cellular component assembly | 1 | 1 | 
| GO:0060322 | head development | 1 | 9 | 
| GO:0010669 | epithelial structure maintenance | 1 | 4 | 
| GO:0006355 | regulation of transcription, DNA-templated | 17 | 1104 | 
| GO:0006351 | transcription, DNA-templated | 25 | 1585 | 
| GO:0045785 | positive regulation of cell adhesion | 5 | 41 | 
| GO:0046985 | positive regulation of hemoglobin biosynthetic process | 1 | 2 | 
| GO:0000790 | nuclear chromatin | 7 | 133 | 
| GO:0042803 | protein homodimerization activity | 11 | 617 | 
| GO:0001158 | enhancer sequence-specific DNA binding | 1 | 17 | 
| GO:0016055 | Wnt signaling pathway | 6 | 141 | 
| GO:0005667 | transcription factor complex | 6 | 178 | 
| GO:0001702 | gastrulation with mouth forming second | 2 | 21 | 
| GO:0000972 | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery | 1 | 1 | 
| GO:0001942 | hair follicle development | 2 | 35 | 
| GO:0009948 | anterior/posterior axis specification | 2 | 15 | 
| GO:0030182 | neuron differentiation | 1 | 77 | 
| GO:0045647 | negative regulation of erythrocyte differentiation | 1 | 7 | 
| GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 19 | 811 | 
| GO:0043234 | protein complex | 17 | 300 | 
| GO:0005634 | nucleus | 131 | 4828 | 
| GO:0003714 | transcription corepressor activity | 7 | 179 | 
| GO:0001102 | RNA polymerase II activating transcription factor binding | 4 | 37 | 
| GO:0007275 | multicellular organismal development | 5 | 344 | 
| GO:0019899 | enzyme binding | 11 | 288 | 
| GO:0032784 | regulation of DNA-templated transcription, elongation | 1 | 12 | 
| GO:0006366 | transcription from RNA polymerase II promoter | 12 | 425 | 
| GO:0043973 | histone H3-K4 acetylation | 1 | 1 | 
| GO:0043621 | protein self-association | 1 | 38 |