int-snw-6128

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
wolf-screen-ratio-mammosphere-adherent	1.113	3.20e-23	2.57e-05	1.13e-03

wolf-screen-ratio-mammosphere-adherent-int-snw-6128 subnetwork

Genes (5)

Gene Symbol	Entrez Gene ID	Frequency	wolf-screen-ratio-mammosphere-adherent gene score	Best subnetwork score	Degree	wolf adherent-list Hits GI	wolf mammosphere no adherent-list Hits GI
ACTB	60	167	1.153	1.151	587	Yes	-
RPS11	6205	36	0.993	1.113	175	Yes	-
RPSA	3921	156	1.327	1.151	152	Yes	-
RPL14	9045	42	1.250	1.113	143	Yes	-
[ RPL6 ]	6128	11	0.844	1.113	164	Yes	-

Interactions (6)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
RPL6	6128	RPL14	9045	pp	--	int.I2D: BioGrid_Yeast
RPL6	6128	RPS11	6205	pp	--	int.I2D: BioGrid_Yeast
RPSA	3921	RPS11	6205	pp	--	int.I2D: BioGrid_Yeast, IntAct_Yeast
ACTB	60	RPSA	3921	pp	--	int.Intact: MI:0915(physical association); int.I2D: IntAct_Yeast, IntAct
RPS11	6205	RPL14	9045	pp	--	int.I2D: BioGrid_Yeast
ACTB	60	RPL6	6128	pp	--	int.I2D: BioGrid_Yeast

Related GO terms (80)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0019083	viral transcription	4.60e-09	6.63e-05	7.154	4	10	81
GO:0006415	translational termination	6.15e-09	8.87e-05	7.051	4	10	87
GO:0006414	translational elongation	8.06e-09	1.16e-04	6.955	4	13	93
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	1.27e-08	1.83e-04	6.794	4	10	104
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	1.84e-08	2.65e-04	6.661	4	11	114
GO:0019058	viral life cycle	1.91e-08	2.75e-04	6.649	4	13	115
GO:0006413	translational initiation	3.23e-08	4.66e-04	6.461	4	17	131
GO:0044267	cellular protein metabolic process	3.76e-08	5.42e-04	4.927	5	29	474
GO:0003735	structural constituent of ribosome	3.87e-08	5.58e-04	6.396	4	10	137
GO:0016071	mRNA metabolic process	2.75e-07	3.96e-03	5.693	4	31	223
GO:0006412	translation	3.11e-07	4.49e-03	5.649	4	20	230
GO:0016070	RNA metabolic process	4.14e-07	5.97e-03	5.546	4	32	247
GO:0016032	viral process	9.02e-06	1.30e-01	4.433	4	55	534
GO:0016020	membrane	2.14e-05	3.09e-01	3.101	5	90	1681
GO:0036464	cytoplasmic ribonucleoprotein granule	2.21e-05	3.19e-01	8.035	2	4	22
GO:0010467	gene expression	2.21e-05	3.19e-01	4.108	4	59	669
GO:0022627	cytosolic small ribosomal subunit	7.09e-05	1.00e+00	7.209	2	4	39
GO:0022625	cytosolic large ribosomal subunit	1.12e-04	1.00e+00	6.879	2	6	49
GO:0044822	poly(A) RNA binding	1.35e-04	1.00e+00	3.450	4	49	1056
GO:0005829	cytosol	1.55e-04	1.00e+00	2.531	5	132	2496
GO:0005925	focal adhesion	1.56e-04	1.00e+00	4.563	3	19	366
GO:0000461	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	6.93e-04	1.00e+00	10.494	1	1	2
GO:0005055	laminin receptor activity	6.93e-04	1.00e+00	10.494	1	1	2
GO:0006407	rRNA export from nucleus	6.93e-04	1.00e+00	10.494	1	1	2
GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.39e-03	1.00e+00	9.494	1	1	4
GO:0030686	90S preribosome	1.39e-03	1.00e+00	9.494	1	1	4
GO:0030957	Tat protein binding	2.08e-03	1.00e+00	8.909	1	3	6
GO:0000028	ribosomal small subunit assembly	2.42e-03	1.00e+00	8.687	1	1	7
GO:0070688	MLL5-L complex	2.77e-03	1.00e+00	8.494	1	1	8
GO:0070062	extracellular vesicular exosome	3.32e-03	1.00e+00	2.265	4	104	2400
GO:0042273	ribosomal large subunit biogenesis	4.50e-03	1.00e+00	7.794	1	4	13
GO:0035267	NuA4 histone acetyltransferase complex	4.84e-03	1.00e+00	7.687	1	4	14
GO:0003723	RNA binding	5.35e-03	1.00e+00	4.076	2	20	342
GO:0050998	nitric-oxide synthase binding	5.54e-03	1.00e+00	7.494	1	1	16
GO:0030863	cortical cytoskeleton	7.60e-03	1.00e+00	7.035	1	1	22
GO:0043044	ATP-dependent chromatin remodeling	7.95e-03	1.00e+00	6.971	1	4	23
GO:0043236	laminin binding	7.95e-03	1.00e+00	6.971	1	1	23
GO:0031492	nucleosomal DNA binding	9.33e-03	1.00e+00	6.739	1	4	27
GO:0019843	rRNA binding	9.33e-03	1.00e+00	6.739	1	3	27
GO:0043022	ribosome binding	9.33e-03	1.00e+00	6.739	1	3	27
GO:0019894	kinesin binding	9.67e-03	1.00e+00	6.687	1	1	28
GO:0001895	retina homeostasis	1.17e-02	1.00e+00	6.407	1	1	34
GO:0034332	adherens junction organization	1.24e-02	1.00e+00	6.324	1	1	36
GO:0051084	'de novo' posttranslational protein folding	1.28e-02	1.00e+00	6.285	1	4	37
GO:0070527	platelet aggregation	1.31e-02	1.00e+00	6.246	1	2	38
GO:0021762	substantia nigra development	1.52e-02	1.00e+00	6.035	1	2	44
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	1.82e-02	1.00e+00	5.766	1	5	53
GO:0045216	cell-cell junction organization	1.86e-02	1.00e+00	5.739	1	2	54
GO:0005840	ribosome	1.99e-02	1.00e+00	5.636	1	1	58
GO:0034329	cell junction assembly	2.34e-02	1.00e+00	5.407	1	1	68
GO:0038096	Fc-gamma receptor signaling pathway involved in phagocytosis	2.54e-02	1.00e+00	5.285	1	6	74
GO:0005200	structural constituent of cytoskeleton	3.12e-02	1.00e+00	4.986	1	8	91
GO:0006928	cellular component movement	3.12e-02	1.00e+00	4.986	1	7	91
GO:0001649	osteoblast differentiation	3.15e-02	1.00e+00	4.971	1	6	92
GO:0006364	rRNA processing	3.22e-02	1.00e+00	4.940	1	6	94
GO:0014069	postsynaptic density	3.59e-02	1.00e+00	4.780	1	3	105
GO:0072562	blood microparticle	3.79e-02	1.00e+00	4.700	1	3	111
GO:0030529	ribonucleoprotein complex	3.82e-02	1.00e+00	4.687	1	8	112
GO:0006325	chromatin organization	4.02e-02	1.00e+00	4.612	1	5	118
GO:0000790	nuclear chromatin	4.39e-02	1.00e+00	4.483	1	9	129
GO:0006457	protein folding	4.86e-02	1.00e+00	4.334	1	7	143
GO:0061024	membrane organization	4.93e-02	1.00e+00	4.314	1	7	145
GO:0000978	RNA polymerase II core promoter proximal region sequence-specific DNA binding	5.59e-02	1.00e+00	4.128	1	7	165
GO:0030424	axon	5.62e-02	1.00e+00	4.119	1	4	166
GO:0005856	cytoskeleton	9.69e-02	1.00e+00	3.309	1	12	291
GO:0043234	protein complex	9.82e-02	1.00e+00	3.290	1	18	295
GO:0005515	protein binding	1.01e-01	1.00e+00	0.938	4	184	6024
GO:0019901	protein kinase binding	1.05e-01	1.00e+00	3.186	1	21	317
GO:0007411	axon guidance	1.06e-01	1.00e+00	3.177	1	13	319
GO:0005737	cytoplasm	1.16e-01	1.00e+00	1.200	3	110	3767
GO:0007155	cell adhesion	1.22e-01	1.00e+00	2.967	1	6	369
GO:0007596	blood coagulation	1.48e-01	1.00e+00	2.664	1	18	455
GO:0045087	innate immune response	1.90e-01	1.00e+00	2.275	1	24	596
GO:0005615	extracellular space	2.91e-01	1.00e+00	1.592	1	17	957
GO:0006355	regulation of transcription, DNA-templated	3.01e-01	1.00e+00	1.533	1	18	997
GO:0005654	nucleoplasm	3.23e-01	1.00e+00	1.415	1	76	1082
GO:0003677	DNA binding	3.57e-01	1.00e+00	1.244	1	28	1218
GO:0005524	ATP binding	3.76e-01	1.00e+00	1.152	1	60	1298
GO:0005634	nucleus	5.05e-01	1.00e+00	0.340	2	136	4559
GO:0005886	plasma membrane	6.27e-01	1.00e+00	0.160	1	45	2582

Wolf-ratios-Mammosphere-Adherent

int-snw-6128

Statistics

Genes (5)

Interactions (6)

Related GO terms (80)