reg-snw-9939

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
wolf-screen-ratio-mammosphere-adherent	0.899	5.35e-08	6.16e-04	1.39e-03

wolf-screen-ratio-mammosphere-adherent-reg-snw-9939 subnetwork

Genes (6)

Gene Symbol	Entrez Gene ID	Frequency	wolf-screen-ratio-mammosphere-adherent gene score	Best subnetwork score	Degree	Transcription factor	wolf adherent-list Hits GI	wolf mammosphere no adherent-list Hits GI
TUBG1	7283	39	0.974	0.973	36	-	Yes	-
CAD	790	25	0.807	0.973	67	-	-	-
RAN	5901	8	0.632	0.899	83	-	Yes	-
RUVBL1	8607	24	0.720	0.973	126	TF	Yes	-
[ RBM8A ]	9939	2	0.450	0.899	47	TF	Yes	-
HNRNPC	3183	40	1.812	0.973	62	-	Yes	-

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
RAN	5901	RBM8A	9939	pd	<	reg.ITFP.txt: no annot
CAD	790	RUVBL1	8607	pd	<	reg.ITFP.txt: no annot
HNRNPC	3183	RUVBL1	8607	pd	<	reg.ITFP.txt: no annot
TUBG1	7283	RUVBL1	8607	pd	<	reg.ITFP.txt: no annot
RAN	5901	RUVBL1	8607	pd	<	reg.ITFP.txt: no annot

Related GO terms (135)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0071013	catalytic step 2 spliceosome	5.67e-04	1.00e+00	5.738	2	5	61
GO:0004151	dihydroorotase activity	6.14e-04	1.00e+00	10.668	1	1	1
GO:0004070	aspartate carbamoyltransferase activity	6.14e-04	1.00e+00	10.668	1	1	1
GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	6.14e-04	1.00e+00	10.668	1	1	1
GO:0070335	aspartate binding	6.14e-04	1.00e+00	10.668	1	1	1
GO:0070409	carbamoyl phosphate biosynthetic process	6.14e-04	1.00e+00	10.668	1	1	1
GO:0016363	nuclear matrix	8.11e-04	1.00e+00	5.479	2	7	73
GO:0005654	nucleoplasm	8.33e-04	1.00e+00	2.894	4	55	876
GO:0005829	cytosol	1.04e-03	1.00e+00	2.187	5	58	1787
GO:0000056	ribosomal small subunit export from nucleus	1.84e-03	1.00e+00	9.083	1	1	3
GO:0006543	glutamine catabolic process	1.84e-03	1.00e+00	9.083	1	1	3
GO:0044205	'de novo' UMP biosynthetic process	1.84e-03	1.00e+00	9.083	1	1	3
GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	1.84e-03	1.00e+00	9.083	1	1	3
GO:0003924	GTPase activity	2.14e-03	1.00e+00	4.774	2	3	119
GO:0051414	response to cortisol	2.46e-03	1.00e+00	8.668	1	1	4
GO:0000212	meiotic spindle organization	2.46e-03	1.00e+00	8.668	1	1	4
GO:0006228	UTP biosynthetic process	2.46e-03	1.00e+00	8.668	1	1	4
GO:0000055	ribosomal large subunit export from nucleus	2.46e-03	1.00e+00	8.668	1	1	4
GO:0000398	mRNA splicing, via spliceosome	2.47e-03	1.00e+00	4.668	2	8	128
GO:0006184	GTP catabolic process	2.55e-03	1.00e+00	4.646	2	3	130
GO:0016020	membrane	2.83e-03	1.00e+00	2.431	4	38	1207
GO:0010467	gene expression	2.89e-03	1.00e+00	3.190	3	31	535
GO:0014075	response to amine	3.07e-03	1.00e+00	8.347	1	1	5
GO:0005827	polar microtubule	3.07e-03	1.00e+00	8.347	1	1	5
GO:0000930	gamma-tubulin complex	3.07e-03	1.00e+00	8.347	1	1	5
GO:0046134	pyrimidine nucleoside biosynthetic process	3.68e-03	1.00e+00	8.083	1	1	6
GO:0031000	response to caffeine	3.68e-03	1.00e+00	8.083	1	1	6
GO:0008380	RNA splicing	4.07e-03	1.00e+00	4.302	2	7	165
GO:0007067	mitotic nuclear division	4.07e-03	1.00e+00	4.302	2	8	165
GO:0075733	intracellular transport of virus	4.29e-03	1.00e+00	7.861	1	1	7
GO:0000812	Swr1 complex	4.29e-03	1.00e+00	7.861	1	2	7
GO:0000166	nucleotide binding	4.62e-03	1.00e+00	4.209	2	6	176
GO:0031122	cytoplasmic microtubule organization	4.91e-03	1.00e+00	7.668	1	2	8
GO:0031011	Ino80 complex	4.91e-03	1.00e+00	7.668	1	2	8
GO:0008266	poly(U) RNA binding	5.52e-03	1.00e+00	7.499	1	1	9
GO:0005525	GTP binding	5.76e-03	1.00e+00	4.046	2	5	197
GO:0006541	glutamine metabolic process	6.13e-03	1.00e+00	7.347	1	1	10
GO:0043968	histone H2A acetylation	6.13e-03	1.00e+00	7.347	1	2	10
GO:0043234	protein complex	6.52e-03	1.00e+00	3.954	2	8	210
GO:0007020	microtubule nucleation	6.74e-03	1.00e+00	7.209	1	1	11
GO:0070935	3'-UTR-mediated mRNA stabilization	6.74e-03	1.00e+00	7.209	1	2	11
GO:0045120	pronucleus	6.74e-03	1.00e+00	7.209	1	1	11
GO:0035267	NuA4 histone acetyltransferase complex	7.35e-03	1.00e+00	7.083	1	3	12
GO:0006259	DNA metabolic process	8.57e-03	1.00e+00	6.861	1	3	14
GO:0003723	RNA binding	8.94e-03	1.00e+00	3.720	2	11	247
GO:0070062	extracellular vesicular exosome	8.95e-03	1.00e+00	1.988	4	43	1641
GO:0044822	poly(A) RNA binding	9.04e-03	1.00e+00	2.611	3	25	799
GO:0035145	exon-exon junction complex	9.18e-03	1.00e+00	6.762	1	1	15
GO:0006206	pyrimidine nucleobase metabolic process	1.04e-02	1.00e+00	6.581	1	2	17
GO:0007052	mitotic spindle organization	1.04e-02	1.00e+00	6.581	1	2	17
GO:0006611	protein export from nucleus	1.10e-02	1.00e+00	6.499	1	2	18
GO:0071364	cellular response to epidermal growth factor stimulus	1.10e-02	1.00e+00	6.499	1	1	18
GO:0003678	DNA helicase activity	1.10e-02	1.00e+00	6.499	1	3	18
GO:0071339	MLL1 complex	1.10e-02	1.00e+00	6.499	1	2	18
GO:0033574	response to testosterone	1.10e-02	1.00e+00	6.499	1	1	18
GO:0000794	condensed nuclear chromosome	1.10e-02	1.00e+00	6.499	1	3	18
GO:0043044	ATP-dependent chromatin remodeling	1.22e-02	1.00e+00	6.347	1	2	20
GO:0034080	CENP-A containing nucleosome assembly	1.22e-02	1.00e+00	6.347	1	2	20
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	1.28e-02	1.00e+00	6.276	1	1	21
GO:0017144	drug metabolic process	1.28e-02	1.00e+00	6.276	1	1	21
GO:0043967	histone H4 acetylation	1.34e-02	1.00e+00	6.209	1	2	22
GO:0007286	spermatid development	1.41e-02	1.00e+00	6.145	1	1	23
GO:0003730	mRNA 3'-UTR binding	1.53e-02	1.00e+00	6.025	1	2	25
GO:0031492	nucleosomal DNA binding	1.53e-02	1.00e+00	6.025	1	2	25
GO:0005634	nucleus	1.76e-02	1.00e+00	1.326	5	67	3246
GO:0018107	peptidyl-threonine phosphorylation	1.77e-02	1.00e+00	5.810	1	2	29
GO:0042802	identical protein binding	1.78e-02	1.00e+00	3.201	2	7	354
GO:0050681	androgen receptor binding	1.83e-02	1.00e+00	5.762	1	2	30
GO:0043195	terminal bouton	1.89e-02	1.00e+00	5.714	1	1	31
GO:0007595	lactation	1.95e-02	1.00e+00	5.668	1	2	32
GO:0019003	GDP binding	2.07e-02	1.00e+00	5.581	1	1	34
GO:0032092	positive regulation of protein binding	2.07e-02	1.00e+00	5.581	1	1	34
GO:0030521	androgen receptor signaling pathway	2.13e-02	1.00e+00	5.539	1	2	35
GO:0031124	mRNA 3'-end processing	2.13e-02	1.00e+00	5.539	1	2	35
GO:0000226	microtubule cytoskeleton organization	2.19e-02	1.00e+00	5.499	1	2	36
GO:0040008	regulation of growth	2.25e-02	1.00e+00	5.459	1	2	37
GO:0035690	cellular response to drug	2.31e-02	1.00e+00	5.421	1	2	38
GO:0006369	termination of RNA polymerase II transcription	2.31e-02	1.00e+00	5.421	1	2	38
GO:0032508	DNA duplex unwinding	2.31e-02	1.00e+00	5.421	1	5	38
GO:0006417	regulation of translation	2.37e-02	1.00e+00	5.383	1	1	39
GO:0042995	cell projection	2.49e-02	1.00e+00	5.311	1	2	41
GO:0031100	organ regeneration	2.67e-02	1.00e+00	5.209	1	2	44
GO:0006406	mRNA export from nucleus	2.67e-02	1.00e+00	5.209	1	1	44
GO:0005730	nucleolus	2.89e-02	1.00e+00	2.004	3	41	1217
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	2.97e-02	1.00e+00	5.054	1	3	49
GO:0006310	DNA recombination	3.03e-02	1.00e+00	5.025	1	6	50
GO:0006334	nucleosome assembly	3.09e-02	1.00e+00	4.996	1	4	51
GO:0005643	nuclear pore	3.09e-02	1.00e+00	4.996	1	2	51
GO:0055086	nucleobase-containing small molecule metabolic process	3.09e-02	1.00e+00	4.996	1	5	51
GO:0005681	spliceosomal complex	3.33e-02	1.00e+00	4.887	1	2	55
GO:0003729	mRNA binding	3.45e-02	1.00e+00	4.836	1	2	57
GO:0000785	chromatin	3.57e-02	1.00e+00	4.786	1	5	59
GO:0007565	female pregnancy	3.87e-02	1.00e+00	4.668	1	2	64
GO:0042470	melanosome	3.87e-02	1.00e+00	4.668	1	2	64
GO:0005200	structural constituent of cytoskeleton	4.11e-02	1.00e+00	4.581	1	2	68
GO:0006325	chromatin organization	4.23e-02	1.00e+00	4.539	1	3	70
GO:0001889	liver development	4.29e-02	1.00e+00	4.519	1	1	71
GO:0001649	osteoblast differentiation	4.46e-02	1.00e+00	4.459	1	2	74
GO:0005815	microtubule organizing center	4.64e-02	1.00e+00	4.402	1	1	77
GO:0019058	viral life cycle	4.70e-02	1.00e+00	4.383	1	3	78
GO:0005737	cytoplasm	4.89e-02	1.00e+00	1.306	4	50	2633
GO:0030529	ribonucleoprotein complex	4.94e-02	1.00e+00	4.311	1	4	82
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	5.05e-02	1.00e+00	4.276	1	3	84
GO:0005515	protein binding	5.22e-02	1.00e+00	0.981	5	76	4124
GO:0000086	G2/M transition of mitotic cell cycle	5.82e-02	1.00e+00	4.069	1	5	97
GO:0016887	ATPase activity	5.99e-02	1.00e+00	4.025	1	6	100
GO:0007507	heart development	6.34e-02	1.00e+00	3.941	1	1	106
GO:0046777	protein autophosphorylation	6.34e-02	1.00e+00	3.941	1	2	106
GO:0000790	nuclear chromatin	6.51e-02	1.00e+00	3.900	1	3	109
GO:0016607	nuclear speck	7.27e-02	1.00e+00	3.738	1	3	122
GO:0004672	protein kinase activity	7.44e-02	1.00e+00	3.703	1	2	125
GO:0019904	protein domain specific binding	7.73e-02	1.00e+00	3.646	1	2	130
GO:0000978	RNA polymerase II core promoter proximal region sequence-specific DNA binding	8.42e-02	1.00e+00	3.519	1	2	142
GO:0044281	small molecule metabolic process	8.86e-02	1.00e+00	1.947	2	32	844
GO:0005524	ATP binding	9.76e-02	1.00e+00	1.868	2	23	892
GO:0007283	spermatogenesis	9.89e-02	1.00e+00	3.276	1	2	168
GO:0016071	mRNA metabolic process	1.00e-01	1.00e+00	3.259	1	21	170
GO:0043025	neuronal cell body	1.01e-01	1.00e+00	3.251	1	3	171
GO:0007264	small GTPase mediated signal transduction	1.02e-01	1.00e+00	3.225	1	1	174
GO:0003713	transcription coactivator activity	1.08e-01	1.00e+00	3.145	1	5	184
GO:0016070	RNA metabolic process	1.10e-01	1.00e+00	3.114	1	21	188
GO:0006357	regulation of transcription from RNA polymerase II promoter	1.18e-01	1.00e+00	3.003	1	1	203
GO:0006281	DNA repair	1.18e-01	1.00e+00	3.003	1	19	203
GO:0019899	enzyme binding	1.22e-01	1.00e+00	2.954	1	4	210
GO:0005813	centrosome	1.26e-01	1.00e+00	2.907	1	8	217
GO:0043231	intracellular membrane-bounded organelle	1.27e-01	1.00e+00	2.900	1	7	218
GO:0003682	chromatin binding	1.45e-01	1.00e+00	2.691	1	6	252
GO:0000278	mitotic cell cycle	1.78e-01	1.00e+00	2.374	1	35	314
GO:0006366	transcription from RNA polymerase II promoter	1.92e-01	1.00e+00	2.255	1	6	341
GO:0045893	positive regulation of transcription, DNA-templated	2.10e-01	1.00e+00	2.110	1	10	377
GO:0005794	Golgi apparatus	2.29e-01	1.00e+00	1.971	1	5	415
GO:0016032	viral process	2.36e-01	1.00e+00	1.927	1	32	428
GO:0007165	signal transduction	3.25e-01	1.00e+00	1.397	1	5	618
GO:0008270	zinc ion binding	3.71e-01	1.00e+00	1.163	1	7	727
GO:0006351	transcription, DNA-templated	5.04e-01	1.00e+00	0.597	1	9	1076

Wolf-ratios-Mammosphere-Adherent

reg-snw-9939

Statistics

Genes (6)

Interactions (5)

Related GO terms (135)