reg-snw-5905

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
wolf-screen-ratio-mammosphere-adherent	0.816	1.47e-06	3.71e-03	6.88e-03

wolf-screen-ratio-mammosphere-adherent-reg-snw-5905 subnetwork

Genes (6)

Gene Symbol	Entrez Gene ID	Frequency	wolf-screen-ratio-mammosphere-adherent gene score	Best subnetwork score	Degree	Transcription factor	wolf adherent-list Hits GI	wolf mammosphere no adherent-list Hits GI
TUBG1	7283	39	0.974	0.973	36	-	Yes	-
[ RANGAP1 ]	5905	1	-0.046	0.816	74	-	Yes	-
PSMD11	5717	15	1.095	0.940	35	TF	Yes	-
EIF2S2	8894	8	1.075	0.940	22	-	Yes	-
PSMD3	5709	9	0.986	0.938	55	TF	Yes	-
PSMC3	5702	3	0.719	0.830	21	-	Yes	-

Interactions (6)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
PSMC3	5702	PSMD3	5709	pd	<	reg.ITFP.txt: no annot
PSMD11	5717	TUBG1	7283	pd	>	reg.ITFP.txt: no annot
PSMD3	5709	TUBG1	7283	pd	>	reg.ITFP.txt: no annot
PSMC3	5702	PSMD11	5717	pd	<	reg.ITFP.txt: no annot
PSMD11	5717	EIF2S2	8894	pd	>	reg.ITFP.txt: no annot
PSMD3	5709	RANGAP1	5905	pd	>	reg.ITFP.txt: no annot

Related GO terms (80)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0022624	proteasome accessory complex	4.68e-08	4.57e-04	8.446	3	7	14
GO:0000278	mitotic cell cycle	1.95e-07	1.90e-03	4.696	5	35	314
GO:0006521	regulation of cellular amino acid metabolic process	1.36e-06	1.33e-02	6.896	3	16	41
GO:0000502	proteasome complex	2.07e-06	2.02e-02	6.699	3	17	47
GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2.82e-06	2.75e-02	6.553	3	17	52
GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	2.99e-06	2.92e-02	6.525	3	17	53
GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	3.53e-06	3.45e-02	6.446	3	17	56
GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	3.73e-06	3.64e-02	6.421	3	16	57
GO:0051439	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	4.35e-06	4.25e-02	6.347	3	17	60
GO:0042590	antigen processing and presentation of exogenous peptide antigen via MHC class I	4.58e-06	4.47e-02	6.323	3	16	61
GO:0031145	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	5.55e-06	5.42e-02	6.231	3	17	65
GO:0002474	antigen processing and presentation of peptide antigen via MHC class I	6.95e-06	6.79e-02	6.124	3	16	70
GO:0005838	proteasome regulatory particle	1.41e-05	1.38e-01	8.347	2	4	10
GO:0000209	protein polyubiquitination	1.59e-05	1.55e-01	5.730	3	16	92
GO:0034641	cellular nitrogen compound metabolic process	2.36e-05	2.30e-01	5.539	3	18	105
GO:0042981	regulation of apoptotic process	2.87e-05	2.80e-01	5.446	3	18	112
GO:0005829	cytosol	3.73e-05	3.64e-01	2.450	6	58	1787
GO:0000082	G1/S transition of mitotic cell cycle	3.98e-05	3.89e-01	5.288	3	24	125
GO:0016071	mRNA metabolic process	9.98e-05	9.74e-01	4.844	3	21	170
GO:0010467	gene expression	1.22e-04	1.00e+00	3.605	4	31	535
GO:0016070	RNA metabolic process	1.35e-04	1.00e+00	4.699	3	21	188
GO:0005098	Ran GTPase activator activity	6.14e-04	1.00e+00	10.668	1	1	1
GO:0043066	negative regulation of apoptotic process	6.60e-04	1.00e+00	3.922	3	20	322
GO:0002176	male germ cell proliferation	1.23e-03	1.00e+00	9.668	1	1	2
GO:0006915	apoptotic process	1.35e-03	1.00e+00	3.570	3	21	411
GO:0016032	viral process	1.51e-03	1.00e+00	3.512	3	32	428
GO:0005850	eukaryotic translation initiation factor 2 complex	1.84e-03	1.00e+00	9.083	1	1	3
GO:0032853	positive regulation of Ran GTPase activity	1.84e-03	1.00e+00	9.083	1	1	3
GO:0000212	meiotic spindle organization	2.46e-03	1.00e+00	8.668	1	1	4
GO:0043248	proteasome assembly	2.46e-03	1.00e+00	8.668	1	1	4
GO:0005827	polar microtubule	3.07e-03	1.00e+00	8.347	1	1	5
GO:0000930	gamma-tubulin complex	3.07e-03	1.00e+00	8.347	1	1	5
GO:0046826	negative regulation of protein export from nucleus	3.68e-03	1.00e+00	8.083	1	1	6
GO:0031122	cytoplasmic microtubule organization	4.91e-03	1.00e+00	7.668	1	2	8
GO:0030234	enzyme regulator activity	6.74e-03	1.00e+00	7.209	1	2	11
GO:0007020	microtubule nucleation	6.74e-03	1.00e+00	7.209	1	1	11
GO:0048863	stem cell differentiation	7.35e-03	1.00e+00	7.083	1	1	12
GO:0042176	regulation of protein catabolic process	8.57e-03	1.00e+00	6.861	1	2	14
GO:0008135	translation factor activity, nucleic acid binding	9.18e-03	1.00e+00	6.762	1	1	15
GO:1903506	regulation of nucleic acid-templated transcription	9.79e-03	1.00e+00	6.668	1	1	16
GO:0044281	small molecule metabolic process	1.05e-02	1.00e+00	2.532	3	32	844
GO:0000794	condensed nuclear chromosome	1.10e-02	1.00e+00	6.499	1	3	18
GO:0005654	nucleoplasm	1.17e-02	1.00e+00	2.479	3	55	876
GO:1903507	negative regulation of nucleic acid-templated transcription	1.28e-02	1.00e+00	6.276	1	1	21
GO:0000226	microtubule cytoskeleton organization	2.19e-02	1.00e+00	5.499	1	2	36
GO:0003743	translation initiation factor activity	2.25e-02	1.00e+00	5.459	1	2	37
GO:0000932	cytoplasmic mRNA processing body	2.61e-02	1.00e+00	5.242	1	2	43
GO:0016020	membrane	2.82e-02	1.00e+00	2.016	3	38	1207
GO:0005643	nuclear pore	3.09e-02	1.00e+00	4.996	1	2	51
GO:0000776	kinetochore	3.33e-02	1.00e+00	4.887	1	4	55
GO:0008584	male gonad development	3.45e-02	1.00e+00	4.836	1	2	57
GO:0000777	condensed chromosome kinetochore	3.45e-02	1.00e+00	4.836	1	2	57
GO:0000922	spindle pole	4.11e-02	1.00e+00	4.581	1	4	68
GO:0005200	structural constituent of cytoskeleton	4.11e-02	1.00e+00	4.581	1	2	68
GO:0005515	protein binding	5.22e-02	1.00e+00	0.981	5	76	4124
GO:0006511	ubiquitin-dependent protein catabolic process	5.52e-02	1.00e+00	4.145	1	2	92
GO:0000086	G2/M transition of mitotic cell cycle	5.82e-02	1.00e+00	4.069	1	5	97
GO:0006413	translational initiation	5.93e-02	1.00e+00	4.039	1	4	99
GO:0016887	ATPase activity	5.99e-02	1.00e+00	4.025	1	6	100
GO:0003924	GTPase activity	7.09e-02	1.00e+00	3.774	1	3	119
GO:0031965	nuclear membrane	7.73e-02	1.00e+00	3.646	1	3	130
GO:0006184	GTP catabolic process	7.73e-02	1.00e+00	3.646	1	3	130
GO:0003714	transcription corepressor activity	8.13e-02	1.00e+00	3.570	1	2	137
GO:0001701	in utero embryonic development	9.10e-02	1.00e+00	3.402	1	3	154
GO:0006412	translation	1.05e-01	1.00e+00	3.193	1	3	178
GO:0003713	transcription coactivator activity	1.08e-01	1.00e+00	3.145	1	5	184
GO:0005525	GTP binding	1.15e-01	1.00e+00	3.046	1	5	197
GO:0005813	centrosome	1.26e-01	1.00e+00	2.907	1	8	217
GO:0006200	ATP catabolic process	1.27e-01	1.00e+00	2.894	1	8	219
GO:0003723	RNA binding	1.43e-01	1.00e+00	2.720	1	11	247
GO:0048471	perinuclear region of cytoplasm	1.94e-01	1.00e+00	2.242	1	5	344
GO:0044267	cellular protein metabolic process	1.98e-01	1.00e+00	2.209	1	5	352
GO:0005737	cytoplasm	2.02e-01	1.00e+00	0.891	3	50	2633
GO:0070062	extracellular vesicular exosome	2.67e-01	1.00e+00	0.988	2	43	1641
GO:0005634	nucleus	3.18e-01	1.00e+00	0.589	3	67	3246
GO:0007165	signal transduction	3.25e-01	1.00e+00	1.397	1	5	618
GO:0044822	poly(A) RNA binding	4.01e-01	1.00e+00	1.026	1	25	799
GO:0005524	ATP binding	4.37e-01	1.00e+00	0.868	1	23	892
GO:0046872	metal ion binding	4.53e-01	1.00e+00	0.801	1	10	934
GO:0005730	nucleolus	5.50e-01	1.00e+00	0.419	1	41	1217

Wolf-ratios-Mammosphere-Adherent

reg-snw-5905

Statistics

Genes (6)

Interactions (6)

Related GO terms (80)