reg-snw-5887

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
wolf-screen-ratio-mammosphere-adherent	0.858	2.95e-07	1.57e-03	3.19e-03

wolf-screen-ratio-mammosphere-adherent-reg-snw-5887 subnetwork

Genes (5)

Gene Symbol	Entrez Gene ID	Frequency	wolf-screen-ratio-mammosphere-adherent gene score	Best subnetwork score	Degree	Transcription factor	wolf adherent-list Hits GI	wolf mammosphere no adherent-list Hits GI
TUBG1	7283	39	0.974	0.973	36	-	Yes	-
PSMD11	5717	15	1.095	0.940	35	TF	Yes	-
EIF2S2	8894	8	1.075	0.940	22	-	Yes	-
PSMD3	5709	9	0.986	0.938	55	TF	Yes	-
[ RAD23B ]	5887	1	0.158	0.858	11	-	Yes	-

Interactions (4)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
PSMD11	5717	TUBG1	7283	pd	>	reg.ITFP.txt: no annot
PSMD3	5709	RAD23B	5887	pd	>	reg.ITFP.txt: no annot
PSMD3	5709	TUBG1	7283	pd	>	reg.ITFP.txt: no annot
PSMD11	5717	EIF2S2	8894	pd	>	reg.ITFP.txt: no annot

Related GO terms (73)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0000502	proteasome complex	1.04e-06	1.01e-02	6.962	3	17	47
GO:0005838	proteasome regulatory particle	9.42e-06	9.20e-02	8.610	2	4	10
GO:0022624	proteasome accessory complex	1.90e-05	1.86e-01	8.124	2	7	14
GO:0006521	regulation of cellular amino acid metabolic process	1.71e-04	1.00e+00	6.574	2	16	41
GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2.75e-04	1.00e+00	6.231	2	17	52
GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	2.86e-04	1.00e+00	6.204	2	17	53
GO:0000278	mitotic cell cycle	3.14e-04	1.00e+00	4.222	3	35	314
GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	3.19e-04	1.00e+00	6.124	2	17	56
GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	3.31e-04	1.00e+00	6.099	2	16	57
GO:0051439	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	3.67e-04	1.00e+00	6.025	2	17	60
GO:0042590	antigen processing and presentation of exogenous peptide antigen via MHC class I	3.79e-04	1.00e+00	6.001	2	16	61
GO:0031145	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	4.31e-04	1.00e+00	5.909	2	17	65
GO:0002474	antigen processing and presentation of peptide antigen via MHC class I	5.00e-04	1.00e+00	5.802	2	16	70
GO:0000715	nucleotide-excision repair, DNA damage recognition	5.12e-04	1.00e+00	10.931	1	1	1
GO:0071942	XPC complex	5.12e-04	1.00e+00	10.931	1	1	1
GO:0000209	protein polyubiquitination	8.62e-04	1.00e+00	5.408	2	16	92
GO:0002176	male germ cell proliferation	1.02e-03	1.00e+00	9.931	1	1	2
GO:0034641	cellular nitrogen compound metabolic process	1.12e-03	1.00e+00	5.217	2	18	105
GO:0042981	regulation of apoptotic process	1.27e-03	1.00e+00	5.124	2	18	112
GO:0010467	gene expression	1.51e-03	1.00e+00	3.453	3	31	535
GO:0005850	eukaryotic translation initiation factor 2 complex	1.54e-03	1.00e+00	9.347	1	1	3
GO:0000082	G1/S transition of mitotic cell cycle	1.59e-03	1.00e+00	4.966	2	24	125
GO:0000212	meiotic spindle organization	2.05e-03	1.00e+00	8.931	1	1	4
GO:0043248	proteasome assembly	2.05e-03	1.00e+00	8.931	1	1	4
GO:0005827	polar microtubule	2.56e-03	1.00e+00	8.610	1	1	5
GO:0000930	gamma-tubulin complex	2.56e-03	1.00e+00	8.610	1	1	5
GO:0016071	mRNA metabolic process	2.91e-03	1.00e+00	4.522	2	21	170
GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	3.07e-03	1.00e+00	8.347	1	1	6
GO:0016070	RNA metabolic process	3.55e-03	1.00e+00	4.377	2	21	188
GO:0031122	cytoplasmic microtubule organization	4.09e-03	1.00e+00	7.931	1	2	8
GO:0005829	cytosol	4.78e-03	1.00e+00	2.128	4	58	1787
GO:0030234	enzyme regulator activity	5.62e-03	1.00e+00	7.472	1	2	11
GO:0007020	microtubule nucleation	5.62e-03	1.00e+00	7.472	1	1	11
GO:0048863	stem cell differentiation	6.13e-03	1.00e+00	7.347	1	1	12
GO:0005654	nucleoplasm	6.27e-03	1.00e+00	2.742	3	55	876
GO:0042176	regulation of protein catabolic process	7.15e-03	1.00e+00	7.124	1	2	14
GO:0031593	polyubiquitin binding	7.66e-03	1.00e+00	7.025	1	1	15
GO:0008135	translation factor activity, nucleic acid binding	7.66e-03	1.00e+00	7.025	1	1	15
GO:0000718	nucleotide-excision repair, DNA damage removal	8.68e-03	1.00e+00	6.844	1	5	17
GO:0000794	condensed nuclear chromosome	9.18e-03	1.00e+00	6.762	1	3	18
GO:0043066	negative regulation of apoptotic process	1.01e-02	1.00e+00	3.601	2	20	322
GO:0006915	apoptotic process	1.62e-02	1.00e+00	3.248	2	21	411
GO:0016032	viral process	1.75e-02	1.00e+00	3.190	2	32	428
GO:0000226	microtubule cytoskeleton organization	1.83e-02	1.00e+00	5.762	1	2	36
GO:0003743	translation initiation factor activity	1.88e-02	1.00e+00	5.722	1	2	37
GO:0003684	damaged DNA binding	2.08e-02	1.00e+00	5.574	1	9	41
GO:0006289	nucleotide-excision repair	2.69e-02	1.00e+00	5.204	1	9	53
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	2.84e-02	1.00e+00	5.124	1	3	56
GO:0008584	male gonad development	2.89e-02	1.00e+00	5.099	1	2	57
GO:0003697	single-stranded DNA binding	2.89e-02	1.00e+00	5.099	1	6	57
GO:0005200	structural constituent of cytoskeleton	3.43e-02	1.00e+00	4.844	1	2	68
GO:0006511	ubiquitin-dependent protein catabolic process	4.62e-02	1.00e+00	4.408	1	2	92
GO:0000086	G2/M transition of mitotic cell cycle	4.87e-02	1.00e+00	4.332	1	5	97
GO:0006413	translational initiation	4.97e-02	1.00e+00	4.302	1	4	99
GO:0003924	GTPase activity	5.95e-02	1.00e+00	4.037	1	3	119
GO:0044281	small molecule metabolic process	6.26e-02	1.00e+00	2.210	2	32	844
GO:0006184	GTP catabolic process	6.48e-02	1.00e+00	3.909	1	3	130
GO:0001701	in utero embryonic development	7.64e-02	1.00e+00	3.665	1	3	154
GO:0007283	spermatogenesis	8.31e-02	1.00e+00	3.539	1	2	168
GO:0006412	translation	8.79e-02	1.00e+00	3.456	1	3	178
GO:0005525	GTP binding	9.69e-02	1.00e+00	3.309	1	5	197
GO:0006281	DNA repair	9.97e-02	1.00e+00	3.266	1	19	203
GO:0005515	protein binding	1.05e-01	1.00e+00	0.922	4	76	4124
GO:0005813	centrosome	1.06e-01	1.00e+00	3.170	1	8	217
GO:0016020	membrane	1.18e-01	1.00e+00	1.694	2	38	1207
GO:0005730	nucleolus	1.20e-01	1.00e+00	1.682	2	41	1217
GO:0003723	RNA binding	1.20e-01	1.00e+00	2.983	1	11	247
GO:0005737	cytoplasm	1.25e-01	1.00e+00	1.154	3	50	2633
GO:0044267	cellular protein metabolic process	1.68e-01	1.00e+00	2.472	1	5	352
GO:0070062	extracellular vesicular exosome	1.99e-01	1.00e+00	1.251	2	43	1641
GO:0005634	nucleus	2.08e-01	1.00e+00	0.852	3	67	3246
GO:0044822	poly(A) RNA binding	3.47e-01	1.00e+00	1.289	1	25	799
GO:0046872	metal ion binding	3.95e-01	1.00e+00	1.064	1	10	934

Wolf-ratios-Mammosphere-Adherent

reg-snw-5887

Statistics

Genes (5)

Interactions (4)

Related GO terms (73)