reg-snw-1994

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
wolf-screen-ratio-mammosphere-adherent	0.809	1.87e-06	4.21e-03	7.70e-03

wolf-screen-ratio-mammosphere-adherent-reg-snw-1994 subnetwork

Genes (6)

Gene Symbol	Entrez Gene ID	Frequency	wolf-screen-ratio-mammosphere-adherent gene score	Best subnetwork score	Degree	Transcription factor	wolf adherent-list Hits GI	wolf mammosphere no adherent-list Hits GI
PSMB2	5690	23	0.877	0.956	52	-	Yes	-
PSMD11	5717	15	1.095	0.940	35	TF	Yes	-
EIF2S2	8894	8	1.075	0.940	22	-	Yes	-
RAN	5901	8	0.632	0.899	83	-	Yes	-
DDX18	8886	3	0.660	0.828	42	TF	Yes	-
[ ELAVL1 ]	1994	1	0.517	0.809	127	TF	Yes	-

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
ELAVL1	1994	DDX18	8886	pd	<>	reg.ITFP.txt: no annot
PSMB2	5690	PSMD11	5717	pd	<	reg.ITFP.txt: no annot
ELAVL1	1994	PSMB2	5690	pd	>	reg.ITFP.txt: no annot
ELAVL1	1994	RAN	5901	pd	>	reg.ITFP.txt: no annot
PSMD11	5717	EIF2S2	8894	pd	>	reg.ITFP.txt: no annot

Related GO terms (91)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0010467	gene expression	2.78e-06	2.71e-02	3.927	5	31	535
GO:0016071	mRNA metabolic process	9.98e-05	9.74e-01	4.844	3	21	170
GO:0016070	RNA metabolic process	1.35e-04	1.00e+00	4.699	3	21	188
GO:0016020	membrane	1.54e-04	1.00e+00	2.753	5	38	1207
GO:0006521	regulation of cellular amino acid metabolic process	2.55e-04	1.00e+00	6.311	2	16	41
GO:0000502	proteasome complex	3.36e-04	1.00e+00	6.114	2	17	47
GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	4.12e-04	1.00e+00	5.968	2	17	52
GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	4.28e-04	1.00e+00	5.941	2	17	53
GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	4.77e-04	1.00e+00	5.861	2	17	56
GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	4.95e-04	1.00e+00	5.836	2	16	57
GO:0051439	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	5.48e-04	1.00e+00	5.762	2	17	60
GO:0042590	antigen processing and presentation of exogenous peptide antigen via MHC class I	5.67e-04	1.00e+00	5.738	2	16	61
GO:0044822	poly(A) RNA binding	5.84e-04	1.00e+00	3.026	4	25	799
GO:0031145	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	6.43e-04	1.00e+00	5.646	2	17	65
GO:0002474	antigen processing and presentation of peptide antigen via MHC class I	7.46e-04	1.00e+00	5.539	2	16	70
GO:0005654	nucleoplasm	8.33e-04	1.00e+00	2.894	4	55	876
GO:0005829	cytosol	1.04e-03	1.00e+00	2.187	5	58	1787
GO:0002176	male germ cell proliferation	1.23e-03	1.00e+00	9.668	1	1	2
GO:0000209	protein polyubiquitination	1.29e-03	1.00e+00	5.145	2	16	92
GO:0016032	viral process	1.51e-03	1.00e+00	3.512	3	32	428
GO:0034641	cellular nitrogen compound metabolic process	1.67e-03	1.00e+00	4.954	2	18	105
GO:0005850	eukaryotic translation initiation factor 2 complex	1.84e-03	1.00e+00	9.083	1	1	3
GO:0000056	ribosomal small subunit export from nucleus	1.84e-03	1.00e+00	9.083	1	1	3
GO:0042981	regulation of apoptotic process	1.90e-03	1.00e+00	4.861	2	18	112
GO:0000082	G1/S transition of mitotic cell cycle	2.36e-03	1.00e+00	4.703	2	24	125
GO:0000055	ribosomal large subunit export from nucleus	2.46e-03	1.00e+00	8.668	1	1	4
GO:0043248	proteasome assembly	2.46e-03	1.00e+00	8.668	1	1	4
GO:0035925	mRNA 3'-UTR AU-rich region binding	3.07e-03	1.00e+00	8.347	1	1	5
GO:0075733	intracellular transport of virus	4.29e-03	1.00e+00	7.861	1	1	7
GO:0048255	mRNA stabilization	5.52e-03	1.00e+00	7.499	1	1	9
GO:0005515	protein binding	5.66e-03	1.00e+00	1.244	6	76	4124
GO:0005838	proteasome regulatory particle	6.13e-03	1.00e+00	7.347	1	4	10
GO:2000036	regulation of stem cell maintenance	6.74e-03	1.00e+00	7.209	1	2	11
GO:0070935	3'-UTR-mediated mRNA stabilization	6.74e-03	1.00e+00	7.209	1	2	11
GO:0048863	stem cell differentiation	7.35e-03	1.00e+00	7.083	1	1	12
GO:0017091	AU-rich element binding	7.96e-03	1.00e+00	6.968	1	1	13
GO:0010243	response to organonitrogen compound	8.57e-03	1.00e+00	6.861	1	1	14
GO:0006259	DNA metabolic process	8.57e-03	1.00e+00	6.861	1	3	14
GO:0022624	proteasome accessory complex	8.57e-03	1.00e+00	6.861	1	7	14
GO:0004004	ATP-dependent RNA helicase activity	8.57e-03	1.00e+00	6.861	1	1	14
GO:0003723	RNA binding	8.94e-03	1.00e+00	3.720	2	11	247
GO:0008135	translation factor activity, nucleic acid binding	9.18e-03	1.00e+00	6.762	1	1	15
GO:0005839	proteasome core complex	9.79e-03	1.00e+00	6.668	1	9	16
GO:0007052	mitotic spindle organization	1.04e-02	1.00e+00	6.581	1	2	17
GO:0004298	threonine-type endopeptidase activity	1.04e-02	1.00e+00	6.581	1	9	17
GO:0044281	small molecule metabolic process	1.05e-02	1.00e+00	2.532	3	32	844
GO:0006611	protein export from nucleus	1.10e-02	1.00e+00	6.499	1	2	18
GO:0007286	spermatid development	1.41e-02	1.00e+00	6.145	1	1	23
GO:0000278	mitotic cell cycle	1.42e-02	1.00e+00	3.374	2	35	314
GO:0043066	negative regulation of apoptotic process	1.49e-02	1.00e+00	3.338	2	20	322
GO:0003730	mRNA 3'-UTR binding	1.53e-02	1.00e+00	6.025	1	2	25
GO:0050681	androgen receptor binding	1.83e-02	1.00e+00	5.762	1	2	30
GO:0032092	positive regulation of protein binding	2.07e-02	1.00e+00	5.581	1	1	34
GO:0019003	GDP binding	2.07e-02	1.00e+00	5.581	1	1	34
GO:0014070	response to organic cyclic compound	2.07e-02	1.00e+00	5.581	1	1	34
GO:0045727	positive regulation of translation	2.13e-02	1.00e+00	5.539	1	2	35
GO:0030521	androgen receptor signaling pathway	2.13e-02	1.00e+00	5.539	1	2	35
GO:0003743	translation initiation factor activity	2.25e-02	1.00e+00	5.459	1	2	37
GO:0006915	apoptotic process	2.37e-02	1.00e+00	2.985	2	21	411
GO:0003725	double-stranded RNA binding	2.73e-02	1.00e+00	5.177	1	3	45
GO:0005643	nuclear pore	3.09e-02	1.00e+00	4.996	1	2	51
GO:0008584	male gonad development	3.45e-02	1.00e+00	4.836	1	2	57
GO:0003729	mRNA binding	3.45e-02	1.00e+00	4.836	1	2	57
GO:0000785	chromatin	3.57e-02	1.00e+00	4.786	1	5	59
GO:0042470	melanosome	3.87e-02	1.00e+00	4.668	1	2	64
GO:0019058	viral life cycle	4.70e-02	1.00e+00	4.383	1	3	78
GO:0006511	ubiquitin-dependent protein catabolic process	5.52e-02	1.00e+00	4.145	1	2	92
GO:0006413	translational initiation	5.93e-02	1.00e+00	4.039	1	4	99
GO:0070062	extracellular vesicular exosome	6.36e-02	1.00e+00	1.573	3	43	1641
GO:0003924	GTPase activity	7.09e-02	1.00e+00	3.774	1	3	119
GO:0006184	GTP catabolic process	7.73e-02	1.00e+00	3.646	1	3	130
GO:0019904	protein domain specific binding	7.73e-02	1.00e+00	3.646	1	2	130
GO:0001701	in utero embryonic development	9.10e-02	1.00e+00	3.402	1	3	154
GO:0007067	mitotic nuclear division	9.72e-02	1.00e+00	3.302	1	8	165
GO:0005634	nucleus	9.92e-02	1.00e+00	1.004	4	67	3246
GO:0007264	small GTPase mediated signal transduction	1.02e-01	1.00e+00	3.225	1	1	174
GO:0000166	nucleotide binding	1.03e-01	1.00e+00	3.209	1	6	176
GO:0006412	translation	1.05e-01	1.00e+00	3.193	1	3	178
GO:0003713	transcription coactivator activity	1.08e-01	1.00e+00	3.145	1	5	184
GO:0005525	GTP binding	1.15e-01	1.00e+00	3.046	1	5	197
GO:0007275	multicellular organismal development	1.25e-01	1.00e+00	2.927	1	4	214
GO:0006200	ATP catabolic process	1.27e-01	1.00e+00	2.894	1	8	219
GO:0019901	protein kinase binding	1.34e-01	1.00e+00	2.810	1	11	232
GO:0003682	chromatin binding	1.45e-01	1.00e+00	2.691	1	6	252
GO:0005730	nucleolus	1.66e-01	1.00e+00	1.419	2	41	1217
GO:0044267	cellular protein metabolic process	1.98e-01	1.00e+00	2.209	1	5	352
GO:0045893	positive regulation of transcription, DNA-templated	2.10e-01	1.00e+00	2.110	1	10	377
GO:0007165	signal transduction	3.25e-01	1.00e+00	1.397	1	5	618
GO:0005524	ATP binding	4.37e-01	1.00e+00	0.868	1	23	892
GO:0046872	metal ion binding	4.53e-01	1.00e+00	0.801	1	10	934
GO:0005737	cytoplasm	5.12e-01	1.00e+00	0.306	2	50	2633

Wolf-ratios-Mammosphere-Adherent

reg-snw-1994

Statistics

Genes (6)

Interactions (5)

Related GO terms (91)