reg-snw-8450

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
tai-screen-luciferase	5.269	2.26e-31	3.26e-05	6.40e-05

tai-screen-luciferase-reg-snw-8450 subnetwork

Genes (5)

Gene Symbol	Entrez Gene ID	Frequency	tai-screen-luciferase gene score	Best subnetwork score	Degree	Transcription factor	List-Gonzales GI	Tai-Hits
COPA	1314	25	-9.395	5.672	170	TF	Yes	Yes
PRIM2	5558	3	-3.507	5.269	67	-	-	-
[ CUL4B ]	8450	6	-2.809	5.269	142	TF	-	-
CKAP5	9793	20	-7.214	5.672	89	TF	Yes	Yes
CDC5L	988	15	-3.419	5.672	155	TF	-	-

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
PRIM2	5558	CUL4B	8450	pd	<	reg.ITFP.txt: no annot
CDC5L	988	COPA	1314	pd	<>	reg.ITFP.txt: no annot
COPA	1314	CUL4B	8450	pd	<>	reg.ITFP.txt: no annot
CDC5L	988	CUL4B	8450	pd	<>	reg.ITFP.txt: no annot
CDC5L	988	CKAP5	9793	pd	<>	reg.ITFP.txt: no annot

Related GO terms (63)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0071987	WD40-repeat domain binding	5.12e-04	1.00e+00	10.931	1	1	1
GO:0030951	establishment or maintenance of microtubule cytoskeleton polarity	1.02e-03	1.00e+00	9.931	1	1	2
GO:1990077	primosome complex	1.02e-03	1.00e+00	9.931	1	1	2
GO:0072422	signal transduction involved in DNA damage checkpoint	1.02e-03	1.00e+00	9.931	1	1	2
GO:0003896	DNA primase activity	1.54e-03	1.00e+00	9.347	1	1	3
GO:0006269	DNA replication, synthesis of RNA primer	1.54e-03	1.00e+00	9.347	1	1	3
GO:0050658	RNA transport	2.05e-03	1.00e+00	8.931	1	1	4
GO:0030157	pancreatic juice secretion	2.05e-03	1.00e+00	8.931	1	1	4
GO:0000974	Prp19 complex	2.56e-03	1.00e+00	8.610	1	1	5
GO:0031465	Cul4B-RING E3 ubiquitin ligase complex	2.56e-03	1.00e+00	8.610	1	1	5
GO:0000930	gamma-tubulin complex	2.56e-03	1.00e+00	8.610	1	1	5
GO:0070914	UV-damage excision repair	3.07e-03	1.00e+00	8.347	1	1	6
GO:0030126	COPI vesicle coat	3.58e-03	1.00e+00	8.124	1	1	7
GO:0035518	histone H2A monoubiquitination	3.58e-03	1.00e+00	8.124	1	1	7
GO:0005662	DNA replication factor A complex	4.09e-03	1.00e+00	7.931	1	1	8
GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	4.09e-03	1.00e+00	7.931	1	1	8
GO:0007051	spindle organization	5.11e-03	1.00e+00	7.610	1	1	10
GO:0051297	centrosome organization	6.13e-03	1.00e+00	7.347	1	1	12
GO:0048205	COPI coating of Golgi vesicle	6.13e-03	1.00e+00	7.347	1	1	12
GO:0035371	microtubule plus-end	6.64e-03	1.00e+00	7.231	1	1	13
GO:0006270	DNA replication initiation	8.68e-03	1.00e+00	6.844	1	1	17
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	8.68e-03	1.00e+00	6.844	1	1	17
GO:0000278	mitotic cell cycle	9.66e-03	1.00e+00	3.637	2	9	314
GO:0032201	telomere maintenance via semi-conservative replication	1.02e-02	1.00e+00	6.610	1	1	20
GO:0051539	4 iron, 4 sulfur cluster binding	1.07e-02	1.00e+00	6.539	1	1	21
GO:0000722	telomere maintenance via recombination	1.12e-02	1.00e+00	6.472	1	1	22
GO:0006271	DNA strand elongation involved in DNA replication	1.48e-02	1.00e+00	6.073	1	1	29
GO:0016020	membrane	1.55e-02	1.00e+00	2.279	3	25	1207
GO:0045732	positive regulation of protein catabolic process	1.73e-02	1.00e+00	5.844	1	1	34
GO:0003684	damaged DNA binding	2.08e-02	1.00e+00	5.574	1	1	41
GO:0000723	telomere maintenance	2.38e-02	1.00e+00	5.377	1	1	47
GO:0005179	hormone activity	3.04e-02	1.00e+00	5.025	1	1	60
GO:0071013	catalytic step 2 spliceosome	3.09e-02	1.00e+00	5.001	1	1	61
GO:0000922	spindle pole	3.43e-02	1.00e+00	4.844	1	3	68
GO:0015630	microtubule cytoskeleton	3.78e-02	1.00e+00	4.703	1	2	75
GO:0006886	intracellular protein transport	4.48e-02	1.00e+00	4.456	1	1	89
GO:0061024	membrane organization	4.48e-02	1.00e+00	4.456	1	3	89
GO:0006511	ubiquitin-dependent protein catabolic process	4.62e-02	1.00e+00	4.408	1	1	92
GO:0000086	G2/M transition of mitotic cell cycle	4.87e-02	1.00e+00	4.332	1	3	97
GO:0005198	structural molecule activity	5.07e-02	1.00e+00	4.273	1	1	101
GO:0007049	cell cycle	5.75e-02	1.00e+00	4.086	1	2	115
GO:0016607	nuclear speck	6.09e-02	1.00e+00	4.001	1	2	122
GO:0000082	G1/S transition of mitotic cell cycle	6.24e-02	1.00e+00	3.966	1	6	125
GO:0000398	mRNA splicing, via spliceosome	6.39e-02	1.00e+00	3.931	1	2	128
GO:0031625	ubiquitin protein ligase binding	6.87e-02	1.00e+00	3.823	1	2	138
GO:0003677	DNA binding	7.71e-02	1.00e+00	2.044	2	12	947
GO:0007067	mitotic nuclear division	8.17e-02	1.00e+00	3.565	1	5	165
GO:0043234	protein complex	1.03e-01	1.00e+00	3.217	1	8	210
GO:0005813	centrosome	1.06e-01	1.00e+00	3.170	1	6	217
GO:0005730	nucleolus	1.20e-01	1.00e+00	1.682	2	21	1217
GO:0003682	chromatin binding	1.23e-01	1.00e+00	2.954	1	3	252
GO:0005737	cytoplasm	1.25e-01	1.00e+00	1.154	3	39	2633
GO:0070062	extracellular vesicular exosome	1.99e-01	1.00e+00	1.251	2	28	1641
GO:0005829	cytosol	2.28e-01	1.00e+00	1.128	2	33	1787
GO:0005615	extracellular space	2.92e-01	1.00e+00	1.585	1	2	651
GO:0006355	regulation of transcription, DNA-templated	3.16e-01	1.00e+00	1.450	1	9	715
GO:0044822	poly(A) RNA binding	3.47e-01	1.00e+00	1.289	1	25	799
GO:0005515	protein binding	3.57e-01	1.00e+00	0.507	3	50	4124
GO:0005654	nucleoplasm	3.75e-01	1.00e+00	1.157	1	16	876
GO:0046872	metal ion binding	3.95e-01	1.00e+00	1.064	1	10	934
GO:0006351	transcription, DNA-templated	4.42e-01	1.00e+00	0.860	1	15	1076
GO:0005634	nucleus	5.37e-01	1.00e+00	0.267	2	40	3246
GO:0005886	plasma membrane	6.35e-01	1.00e+00	0.131	1	13	1784

Tai-Luciferase

reg-snw-8450

Statistics

Genes (5)

Interactions (5)

Related GO terms (63)