reg-snw-8394

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
tai-screen-luciferase	4.751	5.99e-25	4.27e-04	7.04e-04

tai-screen-luciferase-reg-snw-8394 subnetwork

Genes (5)

Gene Symbol	Entrez Gene ID	Frequency	tai-screen-luciferase gene score	Best subnetwork score	Degree	Transcription factor	List-Gonzales GI	Tai-Hits
ZMAT1	84460	1	-3.182	4.751	36	TF	-	-
MRPS12	6183	13	-5.421	5.516	307	TF	Yes	-
[ PIP5K1A ]	8394	1	-1.820	4.751	30	-	-	-
COPA	1314	25	-9.395	5.672	170	TF	Yes	Yes
PSMD3	5709	3	-3.935	4.903	55	TF	-	Yes

Interactions (4)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
COPA	1314	PIP5K1A	8394	pd	>	reg.ITFP.txt: no annot
PSMD3	5709	PIP5K1A	8394	pd	>	reg.ITFP.txt: no annot
PSMD3	5709	MRPS12	6183	pd	<>	reg.ITFP.txt: no annot
PIP5K1A	8394	ZMAT1	84460	pd	<	reg.ITFP.txt: no annot

Related GO terms (75)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0006650	glycerophospholipid metabolic process	5.12e-04	1.00e+00	10.931	1	1	1
GO:0030157	pancreatic juice secretion	2.05e-03	1.00e+00	8.931	1	1	4
GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	2.05e-03	1.00e+00	8.931	1	1	4
GO:0097178	ruffle assembly	2.56e-03	1.00e+00	8.610	1	1	5
GO:0030126	COPI vesicle coat	3.58e-03	1.00e+00	8.124	1	1	7
GO:0010761	fibroblast migration	4.09e-03	1.00e+00	7.931	1	1	8
GO:0032863	activation of Rac GTPase activity	4.09e-03	1.00e+00	7.931	1	1	8
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	4.60e-03	1.00e+00	7.762	1	1	9
GO:0008654	phospholipid biosynthetic process	5.11e-03	1.00e+00	7.610	1	1	10
GO:0072661	protein targeting to plasma membrane	5.11e-03	1.00e+00	7.610	1	1	10
GO:0005838	proteasome regulatory particle	5.11e-03	1.00e+00	7.610	1	2	10
GO:0030234	enzyme regulator activity	5.62e-03	1.00e+00	7.472	1	1	11
GO:0015935	small ribosomal subunit	6.13e-03	1.00e+00	7.347	1	4	12
GO:0048205	COPI coating of Golgi vesicle	6.13e-03	1.00e+00	7.347	1	1	12
GO:0022624	proteasome accessory complex	7.15e-03	1.00e+00	7.124	1	2	14
GO:0042176	regulation of protein catabolic process	7.15e-03	1.00e+00	7.124	1	3	14
GO:0046854	phosphatidylinositol phosphorylation	7.66e-03	1.00e+00	7.025	1	1	15
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	8.68e-03	1.00e+00	6.844	1	1	17
GO:0048041	focal adhesion assembly	9.69e-03	1.00e+00	6.684	1	1	19
GO:0005761	mitochondrial ribosome	1.02e-02	1.00e+00	6.610	1	1	20
GO:0006909	phagocytosis	1.12e-02	1.00e+00	6.472	1	1	22
GO:0031532	actin cytoskeleton reorganization	1.58e-02	1.00e+00	5.977	1	2	31
GO:0060326	cell chemotaxis	1.58e-02	1.00e+00	5.977	1	1	31
GO:0019900	kinase binding	1.63e-02	1.00e+00	5.931	1	2	32
GO:0006661	phosphatidylinositol biosynthetic process	1.78e-02	1.00e+00	5.802	1	1	35
GO:0030216	keratinocyte differentiation	1.93e-02	1.00e+00	5.684	1	1	38
GO:0006521	regulation of cellular amino acid metabolic process	2.08e-02	1.00e+00	5.574	1	3	41
GO:0000502	proteasome complex	2.38e-02	1.00e+00	5.377	1	2	47
GO:0032587	ruffle membrane	2.53e-02	1.00e+00	5.288	1	1	50
GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2.63e-02	1.00e+00	5.231	1	3	52
GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	2.69e-02	1.00e+00	5.204	1	3	53
GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2.84e-02	1.00e+00	5.124	1	3	56
GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	2.89e-02	1.00e+00	5.099	1	3	57
GO:0005179	hormone activity	3.04e-02	1.00e+00	5.025	1	1	60
GO:0051439	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	3.04e-02	1.00e+00	5.025	1	3	60
GO:0042590	antigen processing and presentation of exogenous peptide antigen via MHC class I	3.09e-02	1.00e+00	5.001	1	3	61
GO:0031145	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	3.28e-02	1.00e+00	4.909	1	3	65
GO:0002474	antigen processing and presentation of peptide antigen via MHC class I	3.53e-02	1.00e+00	4.802	1	4	70
GO:0030027	lamellipodium	4.43e-02	1.00e+00	4.472	1	3	88
GO:0006886	intracellular protein transport	4.48e-02	1.00e+00	4.456	1	1	89
GO:0061024	membrane organization	4.48e-02	1.00e+00	4.456	1	3	89
GO:0006644	phospholipid metabolic process	4.48e-02	1.00e+00	4.456	1	1	89
GO:0005829	cytosol	4.57e-02	1.00e+00	1.713	3	33	1787
GO:0000209	protein polyubiquitination	4.62e-02	1.00e+00	4.408	1	3	92
GO:0016477	cell migration	4.82e-02	1.00e+00	4.347	1	1	96
GO:0005198	structural molecule activity	5.07e-02	1.00e+00	4.273	1	1	101
GO:0034641	cellular nitrogen compound metabolic process	5.26e-02	1.00e+00	4.217	1	3	105
GO:0003735	structural constituent of ribosome	5.46e-02	1.00e+00	4.163	1	8	109
GO:0042981	regulation of apoptotic process	5.61e-02	1.00e+00	4.124	1	4	112
GO:0016607	nuclear speck	6.09e-02	1.00e+00	4.001	1	2	122
GO:0000082	G1/S transition of mitotic cell cycle	6.24e-02	1.00e+00	3.966	1	6	125
GO:0044281	small molecule metabolic process	6.26e-02	1.00e+00	2.210	2	8	844
GO:0016071	mRNA metabolic process	8.41e-02	1.00e+00	3.522	1	11	170
GO:0006412	translation	8.79e-02	1.00e+00	3.456	1	13	178
GO:0016070	RNA metabolic process	9.26e-02	1.00e+00	3.377	1	11	188
GO:0016020	membrane	1.18e-01	1.00e+00	1.694	2	25	1207
GO:0005730	nucleolus	1.20e-01	1.00e+00	1.682	2	21	1217
GO:0005737	cytoplasm	1.25e-01	1.00e+00	1.154	3	39	2633
GO:0005925	focal adhesion	1.36e-01	1.00e+00	2.792	1	12	282
GO:0000278	mitotic cell cycle	1.51e-01	1.00e+00	2.637	1	9	314
GO:0043066	negative regulation of apoptotic process	1.54e-01	1.00e+00	2.601	1	6	322
GO:0006915	apoptotic process	1.93e-01	1.00e+00	2.248	1	4	411
GO:0070062	extracellular vesicular exosome	1.99e-01	1.00e+00	1.251	2	28	1641
GO:0016032	viral process	2.01e-01	1.00e+00	2.190	1	13	428
GO:0005634	nucleus	2.08e-01	1.00e+00	0.852	3	40	3246
GO:0010467	gene expression	2.46e-01	1.00e+00	1.868	1	17	535
GO:0007165	signal transduction	2.79e-01	1.00e+00	1.660	1	5	618
GO:0005615	extracellular space	2.92e-01	1.00e+00	1.585	1	2	651
GO:0008270	zinc ion binding	3.21e-01	1.00e+00	1.426	1	5	727
GO:0044822	poly(A) RNA binding	3.47e-01	1.00e+00	1.289	1	25	799
GO:0005654	nucleoplasm	3.75e-01	1.00e+00	1.157	1	16	876
GO:0005524	ATP binding	3.81e-01	1.00e+00	1.131	1	10	892
GO:0003677	DNA binding	4.00e-01	1.00e+00	1.044	1	12	947
GO:0005886	plasma membrane	6.35e-01	1.00e+00	0.131	1	13	1784
GO:0005515	protein binding	7.01e-01	1.00e+00	-0.078	2	50	4124

Tai-Luciferase

reg-snw-8394

Statistics

Genes (5)

Interactions (4)

Related GO terms (75)