reg-snw-1974

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
tai-screen-luciferase	4.940	3.36e-27	1.76e-04	3.10e-04

tai-screen-luciferase-reg-snw-1974 subnetwork

Genes (6)

Gene Symbol	Entrez Gene ID	Frequency	tai-screen-luciferase gene score	Best subnetwork score	Degree	Transcription factor	List-Gonzales GI	Tai-Hits
PRIM2	5558	3	-3.507	5.269	67	-	-	-
COPA	1314	25	-9.395	5.672	170	TF	Yes	Yes
SERBP1	26135	10	-4.612	5.516	43	-	-	Yes
[ EIF4A2 ]	1974	1	-2.084	4.940	35	TF	Yes	-
CKAP5	9793	20	-7.214	5.672	89	TF	Yes	Yes
SRPK2	6733	1	-2.827	4.940	11	-	-	-

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
COPA	1314	SRPK2	6733	pd	>	reg.ITFP.txt: no annot
EIF4A2	1974	SRPK2	6733	pd	>	reg.ITFP.txt: no annot
EIF4A2	1974	CKAP5	9793	pd	<>	reg.ITFP.txt: no annot
EIF4A2	1974	SERBP1	26135	pd	>	reg.ITFP.txt: no annot
EIF4A2	1974	PRIM2	5558	pd	>	reg.ITFP.txt: no annot

Related GO terms (83)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0035063	nuclear speck organization	6.14e-04	1.00e+00	10.668	1	1	1
GO:1990077	primosome complex	1.23e-03	1.00e+00	9.668	1	1	2
GO:0030951	establishment or maintenance of microtubule cytoskeleton polarity	1.23e-03	1.00e+00	9.668	1	1	2
GO:0006269	DNA replication, synthesis of RNA primer	1.84e-03	1.00e+00	9.083	1	1	3
GO:0003896	DNA primase activity	1.84e-03	1.00e+00	9.083	1	1	3
GO:0050658	RNA transport	2.46e-03	1.00e+00	8.668	1	1	4
GO:0030157	pancreatic juice secretion	2.46e-03	1.00e+00	8.668	1	1	4
GO:0048024	regulation of mRNA splicing, via spliceosome	3.07e-03	1.00e+00	8.347	1	1	5
GO:0016281	eukaryotic translation initiation factor 4F complex	3.07e-03	1.00e+00	8.347	1	1	5
GO:0000930	gamma-tubulin complex	3.07e-03	1.00e+00	8.347	1	1	5
GO:0030126	COPI vesicle coat	4.29e-03	1.00e+00	7.861	1	1	7
GO:0007051	spindle organization	6.13e-03	1.00e+00	7.347	1	1	10
GO:0043488	regulation of mRNA stability	6.13e-03	1.00e+00	7.347	1	1	10
GO:0071889	14-3-3 protein binding	6.74e-03	1.00e+00	7.209	1	1	11
GO:0051297	centrosome organization	7.35e-03	1.00e+00	7.083	1	1	12
GO:0048205	COPI coating of Golgi vesicle	7.35e-03	1.00e+00	7.083	1	1	12
GO:0035371	microtubule plus-end	7.96e-03	1.00e+00	6.968	1	1	13
GO:0044822	poly(A) RNA binding	9.04e-03	1.00e+00	2.611	3	25	799
GO:0045070	positive regulation of viral genome replication	9.79e-03	1.00e+00	6.668	1	1	16
GO:0000245	spliceosomal complex assembly	9.79e-03	1.00e+00	6.668	1	1	16
GO:0006270	DNA replication initiation	1.04e-02	1.00e+00	6.581	1	1	17
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	1.04e-02	1.00e+00	6.581	1	1	17
GO:0045787	positive regulation of cell cycle	1.16e-02	1.00e+00	6.421	1	1	19
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	1.16e-02	1.00e+00	6.421	1	1	19
GO:0032201	telomere maintenance via semi-conservative replication	1.22e-02	1.00e+00	6.347	1	1	20
GO:0051539	4 iron, 4 sulfur cluster binding	1.28e-02	1.00e+00	6.276	1	1	21
GO:0000722	telomere maintenance via recombination	1.34e-02	1.00e+00	6.209	1	1	22
GO:0000278	mitotic cell cycle	1.42e-02	1.00e+00	3.374	2	9	314
GO:0003730	mRNA 3'-UTR binding	1.53e-02	1.00e+00	6.025	1	1	25
GO:0045071	negative regulation of viral genome replication	1.53e-02	1.00e+00	6.025	1	1	25
GO:0008026	ATP-dependent helicase activity	1.77e-02	1.00e+00	5.810	1	2	29
GO:0006271	DNA strand elongation involved in DNA replication	1.77e-02	1.00e+00	5.810	1	1	29
GO:0006446	regulation of translational initiation	1.77e-02	1.00e+00	5.810	1	2	29
GO:0003743	translation initiation factor activity	2.25e-02	1.00e+00	5.459	1	5	37
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	2.43e-02	1.00e+00	5.347	1	1	40
GO:0043525	positive regulation of neuron apoptotic process	2.49e-02	1.00e+00	5.311	1	2	41
GO:0004386	helicase activity	2.55e-02	1.00e+00	5.276	1	1	42
GO:0016020	membrane	2.82e-02	1.00e+00	2.016	3	25	1207
GO:0000723	telomere maintenance	2.85e-02	1.00e+00	5.114	1	1	47
GO:0005179	hormone activity	3.63e-02	1.00e+00	4.762	1	1	60
GO:0000922	spindle pole	4.11e-02	1.00e+00	4.581	1	3	68
GO:0015630	microtubule cytoskeleton	4.52e-02	1.00e+00	4.440	1	2	75
GO:0006886	intracellular protein transport	5.35e-02	1.00e+00	4.193	1	1	89
GO:0061024	membrane organization	5.35e-02	1.00e+00	4.193	1	3	89
GO:0000086	G2/M transition of mitotic cell cycle	5.82e-02	1.00e+00	4.069	1	3	97
GO:0006413	translational initiation	5.93e-02	1.00e+00	4.039	1	12	99
GO:0005198	structural molecule activity	6.05e-02	1.00e+00	4.010	1	1	101
GO:0010628	positive regulation of gene expression	6.34e-02	1.00e+00	3.941	1	2	106
GO:0042981	regulation of apoptotic process	6.69e-02	1.00e+00	3.861	1	4	112
GO:0000287	magnesium ion binding	6.86e-02	1.00e+00	3.823	1	1	115
GO:0000082	G1/S transition of mitotic cell cycle	7.44e-02	1.00e+00	3.703	1	6	125
GO:0005829	cytosol	7.91e-02	1.00e+00	1.450	3	33	1787
GO:0001525	angiogenesis	8.64e-02	1.00e+00	3.479	1	2	146
GO:0007067	mitotic nuclear division	9.72e-02	1.00e+00	3.302	1	5	165
GO:0008380	RNA splicing	9.72e-02	1.00e+00	3.302	1	4	165
GO:0005524	ATP binding	9.76e-02	1.00e+00	1.868	2	10	892
GO:0016071	mRNA metabolic process	1.00e-01	1.00e+00	3.259	1	11	170
GO:0019221	cytokine-mediated signaling pathway	1.01e-01	1.00e+00	3.242	1	4	172
GO:0006412	translation	1.05e-01	1.00e+00	3.193	1	13	178
GO:0016070	RNA metabolic process	1.10e-01	1.00e+00	3.114	1	11	188
GO:0004674	protein serine/threonine kinase activity	1.15e-01	1.00e+00	3.046	1	3	197
GO:0035556	intracellular signal transduction	1.16e-01	1.00e+00	3.032	1	3	199
GO:0030154	cell differentiation	1.19e-01	1.00e+00	2.996	1	2	204
GO:0043234	protein complex	1.22e-01	1.00e+00	2.954	1	8	210
GO:0005813	centrosome	1.26e-01	1.00e+00	2.907	1	6	217
GO:0006200	ATP catabolic process	1.27e-01	1.00e+00	2.894	1	2	219
GO:0008284	positive regulation of cell proliferation	1.60e-01	1.00e+00	2.544	1	3	279
GO:0006468	protein phosphorylation	1.71e-01	1.00e+00	2.435	1	3	301
GO:0048471	perinuclear region of cytoplasm	1.94e-01	1.00e+00	2.242	1	7	344
GO:0044267	cellular protein metabolic process	1.98e-01	1.00e+00	2.209	1	13	352
GO:0005737	cytoplasm	2.02e-01	1.00e+00	0.891	3	39	2633
GO:0005515	protein binding	2.11e-01	1.00e+00	0.659	4	50	4124
GO:0016032	viral process	2.36e-01	1.00e+00	1.927	1	13	428
GO:0045087	innate immune response	2.48e-01	1.00e+00	1.848	1	6	452
GO:0070062	extracellular vesicular exosome	2.67e-01	1.00e+00	0.988	2	28	1641
GO:0010467	gene expression	2.87e-01	1.00e+00	1.605	1	17	535
GO:0005615	extracellular space	3.39e-01	1.00e+00	1.322	1	2	651
GO:0005654	nucleoplasm	4.31e-01	1.00e+00	0.894	1	16	876
GO:0046872	metal ion binding	4.53e-01	1.00e+00	0.801	1	10	934
GO:0003677	DNA binding	4.58e-01	1.00e+00	0.781	1	12	947
GO:0005730	nucleolus	5.50e-01	1.00e+00	0.419	1	21	1217
GO:0005634	nucleus	6.47e-01	1.00e+00	0.004	2	40	3246
GO:0005886	plasma membrane	7.02e-01	1.00e+00	-0.132	1	13	1784

Tai-Luciferase

reg-snw-1974

Statistics

Genes (6)

Interactions (5)

Related GO terms (83)