reg-snw-1665

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
tai-screen-luciferase	4.688	3.16e-24	5.65e-04	9.13e-04

tai-screen-luciferase-reg-snw-1665 subnetwork

Genes (5)

Gene Symbol	Entrez Gene ID	Frequency	tai-screen-luciferase gene score	Best subnetwork score	Degree	Transcription factor	List-Gonzales GI	Tai-Hits
COPA	1314	25	-9.395	5.672	170	TF	Yes	Yes
[ DHX15 ]	1665	1	-1.795	4.688	37	TF	-	-
CUL4B	8450	6	-2.809	5.269	142	TF	-	-
CAPRIN1	4076	2	-2.226	4.688	42	-	-	-
CKAP5	9793	20	-7.214	5.672	89	TF	Yes	Yes

Interactions (5)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
CAPRIN1	4076	CKAP5	9793	pd	<	reg.ITFP.txt: no annot
CAPRIN1	4076	CUL4B	8450	pd	<	reg.ITFP.txt: no annot
DHX15	1665	CAPRIN1	4076	pd	>	reg.ITFP.txt: no annot
COPA	1314	CUL4B	8450	pd	<>	reg.ITFP.txt: no annot
COPA	1314	CAPRIN1	4076	pd	>	reg.ITFP.txt: no annot

Related GO terms (57)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0071008	U2-type post-mRNA release spliceosomal complex	5.12e-04	1.00e+00	10.931	1	1	1
GO:0030951	establishment or maintenance of microtubule cytoskeleton polarity	1.02e-03	1.00e+00	9.931	1	1	2
GO:0050658	RNA transport	2.05e-03	1.00e+00	8.931	1	1	4
GO:0030157	pancreatic juice secretion	2.05e-03	1.00e+00	8.931	1	1	4
GO:0061003	positive regulation of dendritic spine morphogenesis	2.56e-03	1.00e+00	8.610	1	1	5
GO:0031465	Cul4B-RING E3 ubiquitin ligase complex	2.56e-03	1.00e+00	8.610	1	1	5
GO:0000930	gamma-tubulin complex	2.56e-03	1.00e+00	8.610	1	1	5
GO:0070914	UV-damage excision repair	3.07e-03	1.00e+00	8.347	1	1	6
GO:0030126	COPI vesicle coat	3.58e-03	1.00e+00	8.124	1	1	7
GO:0035518	histone H2A monoubiquitination	3.58e-03	1.00e+00	8.124	1	1	7
GO:0003724	RNA helicase activity	3.58e-03	1.00e+00	8.124	1	1	7
GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	4.09e-03	1.00e+00	7.931	1	1	8
GO:0007051	spindle organization	5.11e-03	1.00e+00	7.610	1	1	10
GO:0050775	positive regulation of dendrite morphogenesis	5.62e-03	1.00e+00	7.472	1	1	11
GO:0051297	centrosome organization	6.13e-03	1.00e+00	7.347	1	1	12
GO:0048205	COPI coating of Golgi vesicle	6.13e-03	1.00e+00	7.347	1	1	12
GO:0035371	microtubule plus-end	6.64e-03	1.00e+00	7.231	1	1	13
GO:0005689	U12-type spliceosomal complex	8.68e-03	1.00e+00	6.844	1	2	17
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	8.68e-03	1.00e+00	6.844	1	1	17
GO:0010494	cytoplasmic stress granule	1.32e-02	1.00e+00	6.231	1	2	26
GO:0008026	ATP-dependent helicase activity	1.48e-02	1.00e+00	6.073	1	2	29
GO:0016020	membrane	1.55e-02	1.00e+00	2.279	3	25	1207
GO:0017148	negative regulation of translation	1.68e-02	1.00e+00	5.887	1	1	33
GO:0045732	positive regulation of protein catabolic process	1.73e-02	1.00e+00	5.844	1	1	34
GO:0003684	damaged DNA binding	2.08e-02	1.00e+00	5.574	1	1	41
GO:0000932	cytoplasmic mRNA processing body	2.18e-02	1.00e+00	5.505	1	1	43
GO:0003725	double-stranded RNA binding	2.28e-02	1.00e+00	5.440	1	1	45
GO:0005179	hormone activity	3.04e-02	1.00e+00	5.025	1	1	60
GO:0000922	spindle pole	3.43e-02	1.00e+00	4.844	1	3	68
GO:0015630	microtubule cytoskeleton	3.78e-02	1.00e+00	4.703	1	2	75
GO:0006886	intracellular protein transport	4.48e-02	1.00e+00	4.456	1	1	89
GO:0061024	membrane organization	4.48e-02	1.00e+00	4.456	1	3	89
GO:0005829	cytosol	4.57e-02	1.00e+00	1.713	3	33	1787
GO:0006511	ubiquitin-dependent protein catabolic process	4.62e-02	1.00e+00	4.408	1	1	92
GO:0000086	G2/M transition of mitotic cell cycle	4.87e-02	1.00e+00	4.332	1	3	97
GO:0005198	structural molecule activity	5.07e-02	1.00e+00	4.273	1	1	101
GO:0006397	mRNA processing	5.51e-02	1.00e+00	4.150	1	2	110
GO:0044822	poly(A) RNA binding	5.66e-02	1.00e+00	2.289	2	25	799
GO:0007049	cell cycle	5.75e-02	1.00e+00	4.086	1	2	115
GO:0031625	ubiquitin protein ligase binding	6.87e-02	1.00e+00	3.823	1	2	138
GO:0007067	mitotic nuclear division	8.17e-02	1.00e+00	3.565	1	5	165
GO:0008380	RNA splicing	8.17e-02	1.00e+00	3.565	1	4	165
GO:0030425	dendrite	8.22e-02	1.00e+00	3.556	1	3	166
GO:0043234	protein complex	1.03e-01	1.00e+00	3.217	1	8	210
GO:0005813	centrosome	1.06e-01	1.00e+00	3.170	1	6	217
GO:0006200	ATP catabolic process	1.07e-01	1.00e+00	3.157	1	2	219
GO:0003723	RNA binding	1.20e-01	1.00e+00	2.983	1	6	247
GO:0005730	nucleolus	1.20e-01	1.00e+00	1.682	2	21	1217
GO:0005737	cytoplasm	1.25e-01	1.00e+00	1.154	3	39	2633
GO:0000278	mitotic cell cycle	1.51e-01	1.00e+00	2.637	1	9	314
GO:0070062	extracellular vesicular exosome	1.99e-01	1.00e+00	1.251	2	28	1641
GO:0005887	integral component of plasma membrane	2.62e-01	1.00e+00	1.764	1	1	575
GO:0005615	extracellular space	2.92e-01	1.00e+00	1.585	1	2	651
GO:0005515	protein binding	3.57e-01	1.00e+00	0.507	3	50	4124
GO:0005524	ATP binding	3.81e-01	1.00e+00	1.131	1	10	892
GO:0005634	nucleus	5.37e-01	1.00e+00	0.267	2	40	3246
GO:0005886	plasma membrane	6.35e-01	1.00e+00	0.131	1	13	1784

Tai-Luciferase

reg-snw-1665

Statistics

Genes (5)

Interactions (5)

Related GO terms (57)