int-snw-6189

Statistics

Dataset	Score	p-value 1	p-value 2	p-value 3
tai-screen-luciferase	7.011	2.96e-170	3.75e-09	3.42e-04

tai-screen-luciferase-int-snw-6189 subnetwork

Genes (18)

Gene Symbol	Entrez Gene ID	Frequency	tai-screen-luciferase gene score	Best subnetwork score	Degree	List-Gonzales GI	Tai-Hits
RPS8	6202	10	-5.545	7.555	234	-	-
CHMP2A	27243	10	-9.037	7.555	41	Yes	Yes
RPS15	6209	7	-5.040	7.011	116	Yes	-
COPA	1314	32	-9.395	9.063	170	Yes	Yes
RPS24	6229	21	-7.034	8.389	217	Yes	-
RPS9	6203	18	-7.127	7.555	140	Yes	-
COPB2	9276	32	-13.168	9.063	41	Yes	Yes
[ RPS3A ]	6189	3	-4.647	7.189	166	Yes	-
RPS4X	6191	18	-6.747	7.555	263	Yes	-
COPZ1	22818	32	-8.301	9.063	13	Yes	Yes
RPS16	6217	5	-5.444	7.011	202	-	-
RPS15A	6210	8	-5.413	7.555	177	Yes	-
RPS14	6208	4	-4.803	7.011	191	Yes	-
RPS11	6205	17	-6.588	7.555	175	Yes	-
RPS6	6194	17	-5.603	8.046	208	Yes	-
RPS26	6231	17	-7.478	8.046	60	Yes	-
ARCN1	372	32	-8.232	9.063	118	Yes	Yes
RPS13	6207	17	-6.589	7.555	174	Yes	-

Interactions (70)

Gene Symbol 1	Entrez Gene ID 1	Gene Symbol 2	Entrez Gene ID 2	Type	Direction	Origin databases / Sources
RPS9	6203	RPS13	6207	pp	--	int.I2D: BioGrid_Yeast
RPS4X	6191	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS8	6202	RPS9	6203	pp	--	int.I2D: BioGrid_Yeast
RPS15	6209	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast, INTEROLOG, YeastMedium
RPS3A	6189	RPS8	6202	pp	--	int.I2D: BioGrid_Yeast, YeastLow
RPS13	6207	RPS14	6208	pp	--	int.I2D: BioGrid_Yeast
RPS4X	6191	RPS13	6207	pp	--	int.I2D: BioGrid_Yeast
RPS14	6208	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
ARCN1	372	COPZ1	22818	pp	--	int.I2D: BioGrid_Yeast, IntAct_Yeast, MINT_Yeast, Tarassov_PCA, YeastMedium, INTEROLOG
COPA	1314	COPB2	9276	pp	--	int.I2D: BioGrid, HPRD, BCI; int.HPRD: in vivo
RPS13	6207	RPS15	6209	pp	--	int.I2D: BioGrid_Yeast
RPS3A	6189	RPS11	6205	pp	--	int.I2D: BioGrid_Yeast
RPS8	6202	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS3A	6189	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS11	6205	RPS15	6209	pp	--	int.I2D: INTEROLOG, YeastMedium
RPS6	6194	RPS14	6208	pp	--	int.I2D: BioGrid_Yeast
RPS13	6207	RPS15A	6210	pp	--	int.I2D: BioGrid_Yeast
RPS3A	6189	RPS4X	6191	pp	--	int.I2D: BioGrid_Yeast
RPS4X	6191	RPS9	6203	pp	--	int.I2D: BioGrid_Yeast
RPS11	6205	RPS14	6208	pp	--	int.I2D: BioGrid_Yeast
RPS6	6194	RPS13	6207	pp	--	int.I2D: BioGrid_Yeast
RPS3A	6189	RPS9	6203	pp	--	int.I2D: IntAct
RPS16	6217	RPS26	6231	pp	--	int.I2D: BioGrid_Yeast
RPS4X	6191	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
RPS3A	6189	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
RPS14	6208	RPS15	6209	pp	--	int.I2D: INTEROLOG, YeastMedium
ARCN1	372	COPB2	9276	pp	--	int.I2D: HPRD, BCI; int.HPRD: in vivo
RPS8	6202	RPS14	6208	pp	--	int.I2D: BioGrid_Yeast
RPS8	6202	CHMP2A	27243	pp	--	int.I2D: BioGrid_Yeast
RPS8	6202	RPS13	6207	pp	--	int.I2D: BioGrid_Yeast
RPS8	6202	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
RPS9	6203	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS11	6205	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS3A	6189	RPS13	6207	pp	--	int.I2D: BioGrid_Yeast, INTEROLOG, YeastMedium
RPS9	6203	RPS11	6205	pp	--	int.I2D: BioGrid_Yeast
RPS4X	6191	RPS8	6202	pp	--	int.I2D: BioGrid_Yeast
ARCN1	372	COPA	1314	pp	--	int.I2D: BCI, BioGrid_Yeast, IntAct_Yeast, MINT_Yeast, YeastHigh, HPRD, Krogan_Core; int.HPRD: in vivo
RPS15	6209	RPS15A	6210	pp	--	int.I2D: YeastMedium, INTEROLOG
RPS3A	6189	RPS15	6209	pp	--	int.I2D: BioGrid_Yeast
RPS9	6203	RPS15A	6210	pp	--	int.I2D: BioGrid_Yeast
RPS6	6194	RPS8	6202	pp	--	int.I2D: BioGrid_Yeast, YeastLow
COPA	1314	COPZ1	22818	pp	--	int.I2D: BioGrid_Yeast, IntAct_Yeast, Krogan_Core, MINT_Yeast, YeastMedium
RPS4X	6191	RPS11	6205	pp	--	int.I2D: BioGrid_Yeast, INTEROLOG, YeastMedium
RPS6	6194	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
RPS6	6194	RPS15	6209	pp	--	int.I2D: BioGrid_Yeast
RPS3A	6189	RPS14	6208	pp	--	int.I2D: BioGrid_Yeast
RPS8	6202	RPS11	6205	pp	--	int.I2D: BioGrid_Yeast
RPS13	6207	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
RPS11	6205	RPS15A	6210	pp	--	int.I2D: BioGrid_Yeast
RPS11	6205	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
RPS15A	6210	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS6	6194	RPS26	6231	pp	--	int.I2D: YeastLow
RPS11	6205	RPS13	6207	pp	--	int.I2D: BioGrid_Yeast
RPS14	6208	RPS15A	6210	pp	--	int.I2D: BioGrid_Yeast
RPS3A	6189	RPS15A	6210	pp	--	int.I2D: BioGrid_Yeast
ARCN1	372	RPS3A	6189	pp	--	int.I2D: IntAct_Yeast
RPS6	6194	RPS11	6205	pp	--	int.I2D: BioGrid_Yeast
RPS16	6217	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS6	6194	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS4X	6191	RPS6	6194	pp	--	int.I2D: BioGrid_Yeast
RPS15	6209	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS13	6207	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS15A	6210	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
RPS8	6202	RPS15A	6210	pp	--	int.I2D: BioGrid_Yeast
RPS9	6203	RPS16	6217	pp	--	int.I2D: BioGrid_Yeast
RPS14	6208	RPS24	6229	pp	--	int.I2D: BioGrid_Yeast
RPS4X	6191	RPS15	6209	pp	--	int.I2D: INTEROLOG, YeastMedium
RPS3A	6189	RPS6	6194	pp	--	int.I2D: BioGrid_Yeast, YeastLow
RPS4X	6191	RPS14	6208	pp	--	int.I2D: BioGrid_Yeast
RPS4X	6191	RPS15A	6210	pp	--	int.I2D: BioGrid_Yeast, YeastMedium, INTEROLOG

Related GO terms (103)

Accession number	Name	Hypergeometric test	Corrected p-value	Enrichment ratio	Occurrence in subnetwork	Occurrences in all snw genes	Occurrences in all int/reg genes
GO:0022627	cytosolic small ribosomal subunit	3.70e-31	5.33e-27	8.061	13	20	39
GO:0019058	viral life cycle	5.52e-27	7.96e-23	6.608	14	23	115
GO:0019083	viral transcription	1.69e-26	2.43e-22	7.007	13	20	81
GO:0006415	translational termination	4.59e-26	6.61e-22	6.904	13	20	87
GO:0006414	translational elongation	1.16e-25	1.67e-21	6.807	13	20	93
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	5.45e-25	7.86e-21	6.646	13	20	104
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	1.93e-24	2.78e-20	6.514	13	20	114
GO:0006413	translational initiation	1.28e-23	1.85e-19	6.313	13	21	131
GO:0003735	structural constituent of ribosome	2.36e-23	3.40e-19	6.249	13	22	137
GO:0016071	mRNA metabolic process	1.63e-20	2.34e-16	5.546	13	25	223
GO:0006412	translation	2.45e-20	3.54e-16	5.501	13	23	230
GO:0016070	RNA metabolic process	6.31e-20	9.10e-16	5.398	13	25	247
GO:0016032	viral process	2.06e-17	2.97e-13	4.393	14	33	534
GO:0044267	cellular protein metabolic process	3.27e-16	4.72e-12	4.458	13	23	474
GO:0005829	cytosol	1.84e-14	2.66e-10	2.531	18	61	2496
GO:0010467	gene expression	2.84e-14	4.10e-10	3.961	13	29	669
GO:0044822	poly(A) RNA binding	2.72e-13	3.92e-09	3.409	14	32	1056
GO:0016020	membrane	5.44e-12	7.85e-08	2.838	15	41	1681
GO:0015935	small ribosomal subunit	1.01e-11	1.46e-07	7.881	5	9	17
GO:0005925	focal adhesion	1.57e-10	2.27e-06	4.300	9	19	366
GO:0030126	COPI vesicle coat	8.35e-10	1.20e-05	8.061	4	7	12
GO:0042274	ribosomal small subunit biogenesis	8.35e-10	1.20e-05	8.061	4	6	12
GO:0048205	COPI coating of Golgi vesicle	1.21e-09	1.74e-05	7.946	4	8	13
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	2.11e-08	3.05e-04	7.002	4	8	25
GO:0030529	ribonucleoprotein complex	2.04e-07	2.94e-03	5.161	5	7	112
GO:0005840	ribosome	6.91e-07	9.96e-03	5.788	4	8	58
GO:0061024	membrane organization	7.39e-07	1.07e-02	4.788	5	12	145
GO:0070062	extracellular vesicular exosome	3.03e-06	4.37e-02	2.002	12	40	2400
GO:0019843	rRNA binding	4.69e-06	6.76e-02	6.476	3	4	27
GO:0006364	rRNA processing	4.83e-06	6.96e-02	5.092	4	7	94
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.47e-05	2.12e-01	8.324	2	3	5
GO:0033119	negative regulation of RNA splicing	1.47e-05	2.12e-01	8.324	2	2	5
GO:0045182	translation regulator activity	2.20e-05	3.17e-01	8.061	2	2	6
GO:0000028	ribosomal small subunit assembly	3.08e-05	4.44e-01	7.839	2	3	7
GO:0006886	intracellular protein transport	5.13e-05	7.39e-01	4.228	4	7	171
GO:0006891	intra-Golgi vesicle-mediated transport	1.98e-04	1.00e+00	6.559	2	4	17
GO:0036464	cytoplasmic ribonucleoprotein granule	3.35e-04	1.00e+00	6.187	2	3	22
GO:0005844	polysome	3.66e-04	1.00e+00	6.123	2	2	23
GO:0003723	RNA binding	7.30e-04	1.00e+00	3.228	4	8	342
GO:0021691	cerebellar Purkinje cell layer maturation	1.25e-03	1.00e+00	9.646	1	1	1
GO:0022605	oogenesis stage	1.25e-03	1.00e+00	9.646	1	1	1
GO:0005730	nucleolus	2.49e-03	1.00e+00	1.773	7	24	1641
GO:0006417	regulation of translation	2.66e-03	1.00e+00	4.692	2	2	62
GO:0003729	mRNA binding	3.57e-03	1.00e+00	4.476	2	2	72
GO:0000056	ribosomal small subunit export from nucleus	3.74e-03	1.00e+00	8.061	1	2	3
GO:0030490	maturation of SSU-rRNA	4.98e-03	1.00e+00	7.646	1	2	4
GO:0001649	osteoblast differentiation	5.76e-03	1.00e+00	4.123	2	3	92
GO:1902188	positive regulation of viral release from host cell	6.23e-03	1.00e+00	7.324	1	1	5
GO:0002181	cytoplasmic translation	7.47e-03	1.00e+00	7.061	1	2	6
GO:0006924	activation-induced cell death of T cells	7.47e-03	1.00e+00	7.061	1	1	6
GO:0050792	regulation of viral process	7.47e-03	1.00e+00	7.061	1	1	6
GO:0002309	T cell proliferation involved in immune response	7.47e-03	1.00e+00	7.061	1	1	6
GO:0048027	mRNA 5'-UTR binding	8.71e-03	1.00e+00	6.839	1	1	7
GO:0034101	erythrocyte homeostasis	8.71e-03	1.00e+00	6.839	1	1	7
GO:0030157	pancreatic juice secretion	8.71e-03	1.00e+00	6.839	1	1	7
GO:0039702	viral budding via host ESCRT complex	9.94e-03	1.00e+00	6.646	1	1	8
GO:0008284	positive regulation of cell proliferation	1.12e-02	1.00e+00	2.654	3	7	382
GO:0005198	structural molecule activity	1.47e-02	1.00e+00	3.417	2	6	150
GO:1903543	positive regulation of exosomal secretion	1.49e-02	1.00e+00	6.061	1	1	12
GO:0031929	TOR signaling	1.61e-02	1.00e+00	5.946	1	1	13
GO:0030131	clathrin adaptor complex	1.73e-02	1.00e+00	5.839	1	2	14
GO:0031369	translation initiation factor binding	1.86e-02	1.00e+00	5.739	1	1	15
GO:0048821	erythrocyte development	1.86e-02	1.00e+00	5.739	1	1	15
GO:0007369	gastrulation	2.35e-02	1.00e+00	5.398	1	1	19
GO:0043473	pigmentation	2.47e-02	1.00e+00	5.324	1	1	20
GO:0005737	cytoplasm	2.55e-02	1.00e+00	0.937	9	43	3767
GO:0045787	positive regulation of cell cycle	2.71e-02	1.00e+00	5.187	1	2	22
GO:0045184	establishment of protein localization	3.32e-02	1.00e+00	4.891	1	2	27
GO:0001890	placenta development	3.80e-02	1.00e+00	4.692	1	1	31
GO:0007093	mitotic cell cycle checkpoint	3.80e-02	1.00e+00	4.692	1	1	31
GO:0033077	T cell differentiation in thymus	4.04e-02	1.00e+00	4.602	1	1	33
GO:0030218	erythrocyte differentiation	4.52e-02	1.00e+00	4.437	1	2	37
GO:0045727	positive regulation of translation	5.35e-02	1.00e+00	4.187	1	1	44
GO:0008344	adult locomotory behavior	5.35e-02	1.00e+00	4.187	1	1	44
GO:0044297	cell body	5.59e-02	1.00e+00	4.123	1	1	46
GO:0016197	endosomal transport	6.88e-02	1.00e+00	3.813	1	3	57
GO:0031902	late endosome membrane	9.19e-02	1.00e+00	3.379	1	2	77
GO:0005179	hormone activity	9.42e-02	1.00e+00	3.342	1	1	79
GO:0043066	negative regulation of apoptotic process	9.68e-02	1.00e+00	1.918	2	13	424
GO:0042593	glucose homeostasis	1.03e-01	1.00e+00	3.203	1	1	87
GO:0009615	response to virus	1.46e-01	1.00e+00	2.669	1	2	126
GO:0008286	insulin receptor signaling pathway	1.63e-01	1.00e+00	2.496	1	3	142
GO:0000082	G1/S transition of mitotic cell cycle	1.71e-01	1.00e+00	2.427	1	9	149
GO:0019904	protein domain specific binding	2.01e-01	1.00e+00	2.162	1	3	179
GO:0007067	mitotic nuclear division	2.49e-01	1.00e+00	1.820	1	5	227
GO:0030425	dendrite	2.51e-01	1.00e+00	1.801	1	2	230
GO:0000166	nucleotide binding	2.78e-01	1.00e+00	1.629	1	2	259
GO:0043065	positive regulation of apoptotic process	2.87e-01	1.00e+00	1.580	1	6	268
GO:0005515	protein binding	3.16e-01	1.00e+00	0.260	9	62	6024
GO:0030154	cell differentiation	3.16e-01	1.00e+00	1.413	1	2	301
GO:0007275	multicellular organismal development	3.29e-01	1.00e+00	1.342	1	1	316
GO:0019901	protein kinase binding	3.30e-01	1.00e+00	1.338	1	6	317
GO:0043231	intracellular membrane-bounded organelle	3.31e-01	1.00e+00	1.333	1	5	318
GO:0005634	nucleus	3.32e-01	1.00e+00	0.299	7	43	4559
GO:0015031	protein transport	3.50e-01	1.00e+00	1.233	1	8	341
GO:0048471	perinuclear region of cytoplasm	4.72e-01	1.00e+00	0.675	1	7	502
GO:0005783	endoplasmic reticulum	5.07e-01	1.00e+00	0.527	1	3	556
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	5.16e-01	1.00e+00	0.491	1	7	570
GO:0005794	Golgi apparatus	5.41e-01	1.00e+00	0.393	1	9	610
GO:0005615	extracellular space	7.10e-01	1.00e+00	-0.256	1	2	957
GO:0005739	mitochondrion	7.25e-01	1.00e+00	-0.317	1	8	998
GO:0005654	nucleoplasm	7.55e-01	1.00e+00	-0.433	1	15	1082
GO:0003677	DNA binding	7.96e-01	1.00e+00	-0.604	1	3	1218

Tai-Luciferase

int-snw-6189

Statistics

Genes (18)

Interactions (70)

Related GO terms (103)